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Some problems about CODEML
positive selection sites paml codeml written 5.2 years ago by Ginsea Chen130 • updated 6 months ago by Biostar ♦♦ 20
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Codon substitution model (codeml)
dnds codeml paml written 10 months ago by Chvatil50 • updated 8 months ago by Biostar ♦♦ 20
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How To Do Alignment, Stop Codon Removal And Dn/Ds Calulation In One Go?
paml written 7.7 years ago by Nari880 • updated 10 months ago by Vincent Ranwez30
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PAMP Error: Error in sequence data file: L at 54 seq 1
paml written 3.0 years ago by dixex0 • updated 11 months ago by zx87549.7k
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Ka/Ks (Or Dn/Ds) Calculation From Sequenced Transcriptome Contigs
paml written 7.9 years ago by tom.newport10 • updated 13 months ago by Adrian Pelin2.4k
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dN/dS -1, in attempt to test purifying selection, CODEML PAML
paml codeml written 16 months ago by scheng2510 • updated 15 months ago by Biostar ♦♦ 20
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CodeML Troubleshooting Help
evolution paml codeml written 5.7 years ago by p.juttyrajan0 • updated 18 months ago by Diana MoSa10
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Help with understanding PAML M0 output
paml m0 written 18 months ago by DNAngel80 • updated 18 months ago by Dave Carlson390
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very high maximum-likelihood dS values from PAML
dn/ds alignment paml written 2.9 years ago by glarue40 • updated 19 months ago by Biostar ♦♦ 20
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How do you run codeml for two genes in one file but with 1 species tree?
paml codeml written 20 months ago by DNAngel80 • updated 20 months ago by shelkmike290
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