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<prev • 165 results • page 1 of 6 • next >
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Masking and Parsing problem in Standalone BLAST 2.7.1?
makeblastdb masking blastdbcmd ncbi blast parsing written 2.2 years ago by kabir.deb0353 • 10 • updated 6 weeks ago by jayeshkumarsundaram • 0
1
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2
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265
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6 follow
2
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How to remove newline of a FASTA file?
fasta python header parsing written 3 months ago by FlowerFLX • 0 • updated 3 months ago by Joe ♦ 18k
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0
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277
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0
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Understanding minimap2 output (PAF format)
minimap2 paf rna-seq parsing written 3 months ago by Rogerio Ribeiro • 30
0
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1
answer
110
views
1
answer
conservative position extraction
consensus conservative fastq sequence parsing written 4 months ago by gatiyatov • 0 • updated 4 months ago by JC ♦ 11k
1
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0
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146
views
0
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Get duplicate GO ids
biopython genbank parsing written 7 months ago by iCosmoso • 0
0
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0
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259
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0
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News: UniProt: Functional annotation of different gene products in UniProtKB/Swiss-Prot
format news uniprot xml protein parsing written 12 months ago by Elisabeth Gasteiger • 1.7k
3
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1
answer
408
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1
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News: UniProt: Change of FT and CC section in UniProtKB text format
news format protein uniprot parsing written 12 months ago by Elisabeth Gasteiger • 1.7k
1
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0
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357
views
0
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NCBI Taxon ID to IMG Genome IDs
bioinformatics parsing html parsing ids written 14 months ago by Mohak • 10
2
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1
answer
1.5k
views
1
answer
Pathview parsing error
R pathview parsing written 2.9 years ago by ladypurrsia • 40 • updated 15 months ago by AK • 1.9k
1
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2
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344
views
2
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Parsing VCF Data
vcf chromosome tag parsing written 15 months ago by gcooper1245 • 10 • updated 15 months ago by RamRS ♦ 30k
9
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2
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508
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6 follow
2
answers
Convert fasta headers to GFF
htseq gff tophat rna-seq parsing written 15 months ago by alexis.groppi • 30
3
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1
answer
711
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1
answer
How can I parse a json file from MobiDB to retrieve proteome data?
annotation database format proteins parsing written 21 months ago by Jason2 • 0 • updated 19 months ago by ieuangw • 0
3
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1
answer
861
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1
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UniProtKB - mapping gene name to ID (*_HUMAN ) using python2
python api uniprot databases parsing written 21 months ago by jg • 0 • updated 21 months ago by vkkodali • 2.1k
1
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1
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1.4k
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1
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Ensembl VEP cannot parse HGVS notation.
hgvs ensembl vep ref_seq parsing written 4.3 years ago by gmora • 30 • updated 2.0 years ago by zx8754 ♦ 9.6k
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2
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7.6k
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5 follow
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Going From Cigar String In Sam To Genomic Coordinates?
cigar alignment sam parsing written 10.2 years ago by User 9996 • 810 • updated 2.1 years ago by RamRS ♦ 30k
19
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6
answers
7.6k
views
10 follow
6
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How To Extract Just The Coordinate Values From A Pdb File Converted To A Text File, In Java Only?
pdb java coordinates structure parsing written 10.2 years ago by Jeremiahloh • 30 • updated 2.1 years ago by RamRS ♦ 30k
4
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2
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5.7k
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2
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Efficient Fastq Parsing And Manipulation In Java (With Or Without Biojava)
biojava fastq java parsing written 10.3 years ago by Michael Dondrup ♦ 47k • updated 2.1 years ago by RamRS ♦ 30k
14
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3
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3.4k
views
3
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Parsing Custom Snp Info File In Python
python file parsing written 10.3 years ago by Eric Normandeau ♦ 10k • updated 2.1 years ago by RamRS ♦ 30k
2
votes
1
answer
3.7k
views
1
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Clustalw Multiple Sequence Alignment Parsing
parsing written 10.4 years ago by Thaman • 3.3k • updated 2.1 years ago by RamRS ♦ 30k
108
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7
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107k
views
28 follow
7
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Correct Way To Parse A Fasta File In Python
fasta python parsing written 10.5 years ago by Eric Normandeau ♦ 10k • updated 2.1 years ago by RamRS ♦ 30k
0
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469
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0
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Parsing online blast results using NCBIXML returns 50 alignments per Blast.Record object
python parsing ncbixml biopython written 2.2 years ago by aleksanderczeszyk • 0
7
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2
answers
10k
views
11 follow
2
answers
Downloading Data From Mg-Rast
parsing written 6.6 years ago by bioinfo • 790 • updated 2.2 years ago by Dattatray Mongad • 350
5
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2
answers
1.4k
views
2
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Extracting Sub-cellular location from Uniprot into tabular format
swissprot uniprot parsing written 2.3 years ago by Michael Dondrup ♦ 47k • updated 2.3 years ago by Elisabeth Gasteiger • 1.7k
3
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0
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1.0k
views
0
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SAM CIGAR parsing and position counter in R
cigar parsing sam R written 2.4 years ago by niu.shengyong • 60
3
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0
answers
913
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0
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using awk to extract a specific pattern
gff awk extract parsing written 2.4 years ago by Chvatil • 50
4
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2
answers
3.9k
views
2
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Problem parsing interval list file to GenomicsDBImport in GATK4
gatk parsing interval gvcf written 2.8 years ago by Yatros • 20 • updated 2.5 years ago by prnsml • 0
1
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2
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1.5k
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2
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How to parse a pubmed abstract that contains html tags or Unicode in python?
html python pubmed xml parsing written 2.5 years ago by aqsaawan.459 • 0 • updated 2.5 years ago by Pierre Lindenbaum ♦ 130k
0
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729
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0
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RNA Structure prediction using context free grammar
structure prediction rna grammar parsing written 2.5 years ago by maria.sedsvit • 0
5
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1
answer
1.9k
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5 follow
1
answer
convert CSQ and ANN fields to a tab delimitet document with its headers
vcf perl ann csq parsing written 2.7 years ago by paumarc • 20 • updated 2.7 years ago by Pierre Lindenbaum ♦ 130k
8
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2
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5.5k
views
2
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Syntax For Neighborsearch Module In Biopython
pdb biopython parsing written 10.2 years ago by satsurae • 120 • updated 2.7 years ago by jma.bullock • 0
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