Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing selected topics • reset
or   Classic search
<prev • 161 results • page 1 of 6 • next >
0
votes
0
answers
142
views
0
answers
News: UniProt: Functional annotation of different gene products in UniProtKB/Swiss-Prot
format news uniprot xml protein parsing written 4 months ago by Elisabeth Gasteiger • 1.7k
3
votes
1
answer
178
views
1
answer
News: UniProt: Change of FT and CC section in UniProtKB text format
news format protein uniprot parsing written 4 months ago by Elisabeth Gasteiger • 1.7k
1
vote
0
answers
160
views
0
answers
NCBI Taxon ID to IMG Genome IDs
bioinformatics parsing html parsing ids written 6 months ago by Mohak • 10
2
votes
1
answer
1.1k
views
1
answer
Pathview parsing error
R pathview parsing written 2.2 years ago by ladypurrsia • 40 • updated 6 months ago by SMK • 1.9k
1
vote
2
answers
230
views
2
answers
Parsing VCF Data
vcf chromosome tag parsing written 7 months ago by gcooper1245 • 10 • updated 7 months ago by RamRS ♦ 25k
9
votes
2
answers
313
views
6 follow
2
answers
Convert fasta headers to GFF
htseq gff tophat rna-seq parsing written 7 months ago by alexis.groppi • 30
3
votes
1
answer
479
views
1
answer
How can I parse a json file from MobiDB to retrieve proteome data?
annotation database format proteins parsing written 12 months ago by Jason2 • 0 • updated 11 months ago by ieuangw • 0
3
votes
1
answer
572
views
1
answer
UniProtKB - mapping gene name to ID (*_HUMAN ) using python2
python api uniprot databases parsing written 13 months ago by jg • 0 • updated 13 months ago by vkkodali • 1.6k
1
vote
1
answer
1.2k
views
1
answer
Ensembl VEP cannot parse HGVS notation.
hgvs ensembl vep ref_seq parsing written 3.7 years ago by gmora • 20 • updated 16 months ago by zx8754 ♦ 8.9k
20
votes
2
answers
7.2k
views
5 follow
2
answers
Going From Cigar String In Sam To Genomic Coordinates?
cigar alignment sam parsing written 9.6 years ago by User 9996 • 810 • updated 16 months ago by RamRS ♦ 25k
19
votes
6
answers
7.3k
views
10 follow
6
answers
How To Extract Just The Coordinate Values From A Pdb File Converted To A Text File, In Java Only?
pdb java coordinates structure parsing written 9.6 years ago by Jeremiahloh • 30 • updated 16 months ago by RamRS ♦ 25k
4
votes
2
answers
5.3k
views
2
answers
Efficient Fastq Parsing And Manipulation In Java (With Or Without Biojava)
biojava fastq java parsing written 9.6 years ago by Michael Dondrup ♦ 47k • updated 16 months ago by RamRS ♦ 25k
14
votes
3
answers
3.1k
views
3
answers
Parsing Custom Snp Info File In Python
python file parsing written 9.6 years ago by Eric Normandeau ♦ 10k • updated 16 months ago by RamRS ♦ 25k
2
votes
1
answer
3.4k
views
1
answer
Clustalw Multiple Sequence Alignment Parsing
parsing written 9.7 years ago by Thaman • 3.2k • updated 16 months ago by RamRS ♦ 25k
107
votes
7
answers
94k
views
28 follow
7
answers
Correct Way To Parse A Fasta File In Python
fasta python parsing written 9.8 years ago by Eric Normandeau ♦ 10k • updated 16 months ago by RamRS ♦ 25k
0
votes
0
answers
336
views
0
answers
Parsing online blast results using NCBIXML returns 50 alignments per Blast.Record object
python parsing ncbixml biopython written 18 months ago by aleksanderczeszyk • 0
0
votes
0
answers
565
views
0
answers
Masking and Parsing problem in Standalone BLAST 2.7.1?
makeblastdb masking blastdbcmd ncbi blast parsing written 19 months ago by kabir.deb0353 • 0
7
votes
2
answers
9.1k
views
10 follow
2
answers
Downloading Data From Mg-Rast
parsing written 5.9 years ago by bioinfo • 740 • updated 19 months ago by Dattatray Mongad • 350
5
votes
2
answers
935
views
2
answers
Extracting Sub-cellular location from Uniprot into tabular format
swissprot uniprot parsing written 19 months ago by Michael Dondrup ♦ 47k • updated 19 months ago by Elisabeth Gasteiger • 1.7k
3
votes
0
answers
810
views
0
answers
SAM CIGAR parsing and position counter in R
cigar parsing sam R written 21 months ago by niu.shengyong • 50
3
votes
0
answers
757
views
0
answers
using awk to extract a specific pattern
gff awk extract parsing written 21 months ago by Darill • 40
3
votes
2
answers
3.2k
views
2
answers
Problem parsing interval list file to GenomicsDBImport in GATK4
gatk parsing interval gvcf written 2.1 years ago by Yatros • 10 • updated 21 months ago by prnsml • 0
1
vote
2
answers
1.1k
views
2
answers
How to parse a pubmed abstract that contains html tags or Unicode in python?
html python pubmed xml parsing written 22 months ago by aqsaawan.459 • 0 • updated 22 months ago by Pierre Lindenbaum ♦ 125k
0
votes
0
answers
595
views
0
answers
RNA Structure prediction using context free grammar
structure prediction rna grammar parsing written 22 months ago by maria.sedsvit • 0
3
votes
1
answer
1.4k
views
1
answer
convert CSQ and ANN fields to a tab delimitet document with its headers
vcf perl ann csq parsing written 2.0 years ago by paumarc • 10 • updated 2.0 years ago by Pierre Lindenbaum ♦ 125k
8
votes
2
answers
5.1k
views
2
answers
Syntax For Neighborsearch Module In Biopython
pdb biopython parsing written 9.5 years ago by satsurae • 120 • updated 2.1 years ago by jma.bullock • 0
3
votes
2
answers
1.0k
views
6 follow
2
answers
Parsing fasta file using seqIO
fasta sequence biopython parsing written 2.2 years ago by jayasrivatsava • 0 • updated 2.2 years ago by Joe ♦ 16k
3
votes
2
answers
1.5k
views
2
answers
parse nxml file from pubmed
parsing nxml pubmed written 2.3 years ago by Quak • 310 • updated 2.3 years ago by Pierre Lindenbaum ♦ 125k
0
votes
1
answer
688
views
1
answer
How I get mRNA accession no if I have gene name and location with the help of perl
mrna perl mirna parsing written 2.4 years ago by anshulmbi • 0 • updated 2.4 years ago by Russ • 460
3
votes
1
answer
803
views
1
answer
Trimming local GB file with Biopython
python biopython genbank parsing written 2.4 years ago by 13dsc • 0 • updated 2.4 years ago by Joe ♦ 16k
<prev • 161 results • page 1 of 6 • next >
Recent Votes
Recent Locations • All »
  • Germany, 1 minute ago
  • France / Toulouse / GeT-Plage, 1 minute ago
  • Pakistan, 5 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2118 users visited in the last hour