Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing selected topics • reset
or   Classic search
<prev • 167 results • page 1 of 6 • next >
0
votes
1
answer
96
views
1
answer
SnpSift set intersection with EFF annotations
snpsift annotation variant parsing written 29 days ago by Richard • 570
2
votes
1
answer
3.8k
views
1
answer
Clustalw Multiple Sequence Alignment Parsing
parsing written 10.7 years ago by Thaman • 3.3k • updated 6 weeks ago by Biostar ♦♦ 20
0
votes
0
answers
135
views
0
answers
How to do parsing of HGVSp ids?
hgvs parsing snp hgvsp written 12 weeks ago by salamonj9 • 0
0
votes
1
answer
852
views
1
answer
Masking and Parsing problem in Standalone BLAST 2.7.1?
makeblastdb masking blastdbcmd ncbi blast parsing written 2.5 years ago by kabir.deb0353 • 10 • updated 5 months ago by jayeshkumarsundaram • 0
1
vote
2
answers
623
views
6 follow
2
answers
How to remove newline of a FASTA file?
fasta python header parsing written 7 months ago by FlowerFLX • 0 • updated 7 months ago by Joe ♦ 18k
0
votes
0
answers
633
views
0
answers
Understanding minimap2 output (PAF format)
minimap2 paf rna-seq parsing written 7 months ago by Rogerio Ribeiro • 30
0
votes
1
answer
147
views
1
answer
conservative position extraction
consensus conservative fastq sequence parsing written 8 months ago by gatiyatov • 0 • updated 8 months ago by JC ♦ 12k
1
vote
0
answers
183
views
0
answers
Get duplicate GO ids
biopython genbank parsing written 11 months ago by iCosmoso • 0
0
votes
0
answers
305
views
0
answers
News: UniProt: Functional annotation of different gene products in UniProtKB/Swiss-Prot
format news uniprot xml protein parsing written 16 months ago by Elisabeth Gasteiger • 1.9k
3
votes
1
answer
482
views
1
answer
News: UniProt: Change of FT and CC section in UniProtKB text format
news format protein uniprot parsing written 16 months ago by Elisabeth Gasteiger • 1.9k
1
vote
0
answers
478
views
0
answers
NCBI Taxon ID to IMG Genome IDs
bioinformatics parsing html parsing ids written 18 months ago by Mohak • 10
2
votes
1
answer
1.7k
views
1
answer
Pathview parsing error
R pathview parsing written 3.2 years ago by ladypurrsia • 40 • updated 18 months ago by AK • 2.0k
1
vote
2
answers
420
views
2
answers
Parsing VCF Data
vcf chromosome tag parsing written 19 months ago by gcooper1245 • 10 • updated 19 months ago by _r_am ♦ 32k
9
votes
2
answers
596
views
6 follow
2
answers
Convert fasta headers to GFF
htseq gff tophat rna-seq parsing written 19 months ago by alexis.groppi • 30
3
votes
1
answer
782
views
1
answer
How can I parse a json file from MobiDB to retrieve proteome data?
annotation database format proteins parsing written 2.0 years ago by Jason2 • 0 • updated 23 months ago by ieuangw • 0
3
votes
1
answer
1.0k
views
1
answer
UniProtKB - mapping gene name to ID (*_HUMAN ) using python2
python api uniprot databases parsing written 2.1 years ago by jg • 0 • updated 2.1 years ago by vkkodali • 2.4k
1
vote
1
answer
1.5k
views
1
answer
Ensembl VEP cannot parse HGVS notation.
hgvs ensembl vep ref_seq parsing written 4.7 years ago by gmora • 30 • updated 2.3 years ago by zx8754 ♦ 9.9k
20
votes
2
answers
7.8k
views
5 follow
2
answers
Going From Cigar String In Sam To Genomic Coordinates?
cigar alignment sam parsing written 10.5 years ago by User 9996 • 810 • updated 2.4 years ago by _r_am ♦ 32k
19
votes
6
answers
7.8k
views
10 follow
6
answers
How To Extract Just The Coordinate Values From A Pdb File Converted To A Text File, In Java Only?
pdb java coordinates structure parsing written 10.5 years ago by Jeremiahloh • 30 • updated 2.4 years ago by _r_am ♦ 32k
4
votes
2
answers
5.8k
views
2
answers
Efficient Fastq Parsing And Manipulation In Java (With Or Without Biojava)
biojava fastq java parsing written 10.6 years ago by Michael Dondrup ♦ 48k • updated 2.4 years ago by _r_am ♦ 32k
14
votes
3
answers
3.5k
views
3
answers
Parsing Custom Snp Info File In Python
python file parsing written 10.6 years ago by Eric Normandeau ♦ 10k • updated 2.4 years ago by _r_am ♦ 32k
108
votes
7
answers
113k
views
28 follow
7
answers
Correct Way To Parse A Fasta File In Python
fasta python parsing written 10.8 years ago by Eric Normandeau ♦ 10k • updated 2.4 years ago by _r_am ♦ 32k
0
votes
0
answers
531
views
0
answers
Parsing online blast results using NCBIXML returns 50 alignments per Blast.Record object
python parsing ncbixml biopython written 2.5 years ago by aleksanderczeszyk • 0
7
votes
2
answers
11k
views
11 follow
2
answers
Downloading Data From Mg-Rast
parsing written 6.9 years ago by bioinfo • 790 • updated 2.5 years ago by Dattatray Mongad • 350
5
votes
2
answers
1.5k
views
2
answers
Extracting Sub-cellular location from Uniprot into tabular format
swissprot uniprot parsing written 2.6 years ago by Michael Dondrup ♦ 48k • updated 2.6 years ago by Elisabeth Gasteiger • 1.9k
3
votes
0
answers
1.1k
views
0
answers
SAM CIGAR parsing and position counter in R
cigar parsing sam R written 2.7 years ago by niu.shengyong • 60
3
votes
0
answers
988
views
0
answers
using awk to extract a specific pattern
gff awk extract parsing written 2.8 years ago by Chvatil • 50
4
votes
2
answers
4.3k
views
2
answers
Problem parsing interval list file to GenomicsDBImport in GATK4
gatk parsing interval gvcf written 3.1 years ago by Yatros • 20 • updated 2.8 years ago by prnsml • 0
1
vote
2
answers
1.6k
views
2
answers
How to parse a pubmed abstract that contains html tags or Unicode in python?
html python pubmed xml parsing written 2.8 years ago by aqsaawan.459 • 0 • updated 2.8 years ago by Pierre Lindenbaum ♦ 133k
0
votes
0
answers
778
views
0
answers
RNA Structure prediction using context free grammar
structure prediction rna grammar parsing written 2.8 years ago by maria.sedsvit • 0
<prev • 167 results • page 1 of 6 • next >
Recent Votes
Recent Locations • All »
  • United States, just now
  • Seattle, WA USA, 1 minute ago
  • Hyderabad India, 2 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1466 users visited in the last hour
_