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22
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3
answers
1.2k
views
28 follow
3
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Tutorial: Pathway Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 4 months ago by egeulgen • 480 • updated 8 days ago by lucatucciarone • 40
7
votes
2
answers
9.8k
views
6 follow
2
answers
How To Compute The Significance Of The Overlap Of The Size Of The Intersection Of Two Gene Sets.
pathway statistics written 5.3 years ago by ChIP • 490 • updated 26 days ago by Vasei • 20
0
votes
1
answer
121
views
1
answer
Map Gene names/IDs on Pathway with KEGG
pathway gene kegg written 7 weeks ago by Shelle • 0 • updated 7 weeks ago by h.mon ♦ 21k
20
votes
2
answers
8.6k
views
7 follow
2
answers
How To Use The Kegg Xml Files?
pathway kegg written 8.4 years ago by Panos • 1.6k • updated 9 weeks ago by RamRS ♦ 19k
4
votes
2
answers
1.7k
views
2
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ClusterProfiler-cnetplot output to Cytoscape?
pathway clusterprofiler written 2.1 years ago by EdS • 10 • updated 9 weeks ago by Max.Ka • 0
35
votes
10
answers
20k
views
18 follow
10
answers
Get All The Genes In A Pathway (E.G. Kegg)
pathway gwas kegg gene written 7.4 years ago by Stephen ♦ 2.6k • updated 10 weeks ago by RamRS ♦ 19k
2
votes
2
answers
176
views
2
answers
Which DE genes should be included in pathway search
pathway de rna-seq written 12 weeks ago by jomo018 • 430 • updated 12 weeks ago by grant.hovhannisyan • 1.2k
0
votes
0
answers
166
views
0
answers
GSEA analysis and pathway mapping
pathway R rna-seq written 3 months ago by ps1212 • 0
0
votes
0
answers
262
views
0
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How to characterise a protein "enzyme", and find evolutionary divergence into two distinct pathways?
pathway proteins enzymes protocol written 4 months ago by arpankbasak • 10
2
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5
answers
5.0k
views
5
answers
How to perform KEGG enrichment analyses on a set of genes
pathway enrichment kegg rna-seq R written 2.0 years ago by miyakokodama • 10 • updated 4 months ago by bigmawen • 300
0
votes
1
answer
168
views
1
answer
Metabolic Pathways From KEGG.
pathway assembly downloads written 4 months ago by waqarlodhi93 • 0 • updated 4 months ago by EagleEye ♦ 5.9k
0
votes
0
answers
265
views
0
answers
How to do protein pathway analysis rna-seq?
pathway metabolism rna-seq gene written 4 months ago by brieannsobieski • 0
14
votes
0
answers
943
views
11 follow
0
answers
Tool: pathfindR - Pathway Enrichment Analysis using Active Subnetworks
pathway R active subnetwork tool enrichment written 8 months ago by egeulgen • 480
3
votes
1
answer
1.6k
views
6 follow
1
answer
DAVID Fisher Exact Test contingency table
pathway stats david written 18 months ago by igor ♦ 7.0k • updated 5 months ago by Poorya Parvizi • 40
0
votes
1
answer
380
views
1
answer
Genome annotation to KEGG KO ids
genome assembly sequence kegg pathway written 6 months ago by Dattatray Mongad • 200 • updated 6 months ago by lieven.sterck • 3.1k
0
votes
0
answers
237
views
0
answers
miR2Pathway and finite observations
pathway R mirna written 7 months ago by plink_9857 • 40 • updated 7 months ago by genomax ♦ 58k
0
votes
0
answers
330
views
0
answers
Creating pathway diagrams from xml file
pathway xml written 8 months ago by Natasha • 30
109
votes
20
answers
88k
views
55 follow
20
answers
Is There A Free Alternative To Ingenuity Pathway Analysis?
pathway network written 7.7 years ago by Gon • 410 • updated 8 months ago by Francis Crick • 50
1
vote
1
answer
235
views
1
answer
How to form network using tanimoto distance
pathway R network written 8 months ago by swap • 0 • updated 8 months ago by Jean-Karim Heriche ♦ 16k
2
votes
0
answers
356
views
0
answers
Pathway Analysis with an "ideal environment"
pathway rna-seq written 8 months ago by Mozart • 60
2
votes
0
answers
276
views
0
answers
Creating a pathway with requirements
pathway gfp operon iptg written 8 months ago by JongD12 • 0
5
votes
2
answers
644
views
6 follow
2
answers
Gene pathway analysis of my list of genes
pathway R genes enrichment written 9 months ago by Pin.Bioinf • 170 • updated 9 months ago by genomax ♦ 58k
2
votes
1
answer
325
views
1
answer
Reconstruct principal curves from the results of pathifier package
pathway R bioconductor pathifier principal curves written 9 months ago by arronar • 150 • updated 9 months ago by Suren • 90
0
votes
0
answers
203
views
0
answers
Pathway search for the plant genes
pathway written 9 months ago by User000 • 260
5
votes
2
answers
1.6k
views
7 follow
2
answers
pathway for single cell RNA-seq
pathway written 9 months ago by kanwarjag • 910 • updated 9 months ago by igor ♦ 7.0k
0
votes
2
answers
2.7k
views
2
answers
How to use WEGO (Web Gene Ontology Annotation Plot)
pathway gene ontology wego written 3.0 years ago by amyfm • 10 • updated 10 months ago by Vijay Lakhujani ♦ 3.2k
15
votes
6
answers
4.0k
views
13 follow
6
answers
Pathway Analysis Tool
pathway written 4.3 years ago by pixie@bioinfo • 1.3k • updated 10 months ago by raghavsehgal1995 • 0
13
votes
2
answers
596
views
8 follow
2
answers
Tool: iProtein.info website: Express online visualization of human genome pathways
pathway visualization reactome signalling tool written 11 months ago by serena_yu • 110
0
votes
0
answers
328
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0
answers
Generating descriptors at pathway level for further use to classification methods.
descriptors pathway classification microarrays written 10 months ago by arronar • 150
0
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0
answers
1.2k
views
0
answers
How to extract essential genes from enriched pathways (essGene) using DEseq2/GAGE workflow?
pathway rna-seq essgene gage written 2.1 years ago by Ml6237 • 0 • updated 10 months ago by Biostar ♦♦ 20
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