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4
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2
answers
81
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2
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Find the most frequently appeared genes in a list of pathways and genes
pathway dominant most frequent gene written 1 day ago by Kim • 0 • updated 1 day ago by zx8754 ♦ 7.9k
2
votes
1
answer
106
views
1
answer
Family ID/Name in PANTHER
pathway panther written 20 days ago by yp19 • 30 • updated 20 days ago by Mensur Dlakic • 540
54
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0
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3.9k
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59 follow
0
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Tutorial: Pathway Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 14 months ago by egeulgen • 810 • updated 29 days ago by Fil • 0
0
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1
answer
143
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1
answer
grouping gene ontology parent-child terms
gene pathway ontology enrichment written 11 weeks ago by clementine • 0 • updated 4 weeks ago by Jean-Karim Heriche ♦ 20k
2
votes
4
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2.0k
views
5 follow
4
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Any Tools To Plot Or Classify Mitochondrial Genes?
pathway mitochondria written 8.3 years ago by Dejian • 1.3k • updated 4 weeks ago by Biostar ♦♦ 20
2
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1
answer
145
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1
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Getting a list of up and down regulated genes in a pathway
gene pathway written 6 weeks ago by F • 3.4k • updated 6 weeks ago by Gabriel • 50
0
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0
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81
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0
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Activator o repressor protein in a pathway
pathway written 9 weeks ago by jgarces • 10
2
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1
answer
151
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1
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Number of genes in a kegg pathway
pathway genes kegg rna-seq written 12 weeks ago by ignazio.fontana • 0 • updated 12 weeks ago by predeus • 1.2k
4
votes
1
answer
250
views
1
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How I reproduce such a plot
pathway R single cell rna-seq protomics written 12 weeks ago by F • 3.4k • updated 12 weeks ago by SMK • 1.8k
0
votes
1
answer
221
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1
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Convert KEGG KGML files in GPML format
pathway pathvisio kegg written 3 months ago by dnnxl15 • 0 • updated 3 months ago by cannin • 250
1
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1
answer
178
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1
answer
Request compound name from KEGG Database
pathway compound kegg written 3 months ago by dnnxl15 • 0 • updated 3 months ago by SMK • 1.8k
2
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2
answers
997
views
2
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Visualize the two pathways sharing some common genes
pathway website visualization written 4.0 years ago by Zhilong Jia • 1.4k • updated 3 months ago by Biostar ♦♦ 20
0
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0
answers
129
views
0
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Reactome Pathway Analysis Identifiers not found
pathway gene analysis proteins enrichment written 3 months ago by bachs • 0
1
vote
1
answer
204
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6 follow
1
answer
Free pathway analysis software
pathway rna-seq written 3 months ago by j.hoolachan • 10
118
votes
21
answers
96k
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65 follow
21
answers
Is There A Free Alternative To Ingenuity Pathway Analysis?
pathway network written 8.5 years ago by Gon • 470 • updated 4 months ago by malina • 0
3
votes
1
answer
166
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1
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Interpreting a list of Differentially Expessed Genes
pathway analysis written 4 months ago by ajp104 • 0 • updated 4 months ago by jared.andrews07 • 2.9k
2
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0
answers
308
views
0
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Output from KEGG pathway analysis: multiple genes correspond to the same enzyme
pathway kegg rna-seq enzyme written 6 months ago by abbeysj20 • 0 • updated 4 months ago by Biostar ♦♦ 20
0
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0
answers
163
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0
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Ideas for integrating transcriptomic data/co-expression network and genome-scale metabolic networks
pathway rna-seq written 4 months ago by pixie@bioinfo • 1.4k
0
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2
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1.2k
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2
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Is there any resource annotating protein function within a pathway?
pathway protein written 4.8 years ago by ajingnk • 120 • updated 5 months ago by Biostar ♦♦ 20
2
votes
1
answer
215
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1
answer
differential gene set testing combining genes from multiple panels
pathway limma rna-seq voom written 5 months ago by glocke01 • 160 • updated 5 months ago by Gordon Smyth • 950
0
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2
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983
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2
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Genome annotation to KEGG KO ids
genome assembly sequence kegg pathway written 15 months ago by Dattatray Mongad • 320 • updated 5 months ago by SilentGene • 20
1
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1
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540
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1
answer
[Should I used CAGE?]: gene set enrichment analysis on image analysis experimental values
gene pathway bioprocess written 2.2 years ago by Aurelie MLB • 320 • updated 6 months ago by Biostar ♦♦ 20
3
votes
2
answers
2.9k
views
2
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List Of Pathway Names For Each Gene/Protein
pathway gene written 6.7 years ago by I am • 70 • updated 6 months ago by Biostar ♦♦ 20
41
votes
7
answers
2.5k
views
10 follow
7
answers
Kegg Paywalled, What Do People Use?
pathway database kegg written 7.2 years ago by Iddo • 230 • updated 6 months ago by Charles Warden ♦ 7.2k
0
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0
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166
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0
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Pathway Annotation, grouping of sparse data on pathway level
pathway written 6 months ago by kuckunniwid • 70
0
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0
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230
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0
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Assesing Gene topology and connectivity
gene co-expresion topology rna-seq pathway written 6 months ago by v82masae • 140
15
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0
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1.9k
views
11 follow
0
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Tool: pathfindR - Pathway Enrichment Analysis using Active Subnetworks
pathway R active subnetwork tool enrichment written 17 months ago by egeulgen • 810
0
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0
answers
251
views
0
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Finding UP and DOWN regulated genes in a pathway incline to which group
pathway R enrichment analysis written 6 months ago by F • 3.4k
7
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2
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11k
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6 follow
2
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How To Compute The Significance Of The Overlap Of The Size Of The Intersection Of Two Gene Sets.
pathway statistics written 6.0 years ago by ChIP • 500 • updated 10 months ago by Vasei • 30
0
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1
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414
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1
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Map Gene names/IDs on Pathway with KEGG
pathway gene kegg written 11 months ago by Shelle • 0 • updated 11 months ago by h.mon ♦ 27k
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