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41
votes
7
answers
2.3k
views
10 follow
7
answers
Kegg Paywalled, What Do People Use?
pathway database kegg written 6.7 years ago by Iddo • 230 • updated 4 days ago by Charles Warden ♦ 6.1k
0
votes
0
answers
39
views
0
answers
Pathway Annotation, grouping of sparse data on pathway level
pathway written 5 days ago by kuckunniwid • 20
0
votes
0
answers
83
views
0
answers
Assesing Gene topology and connectivity
gene co-expresion topology rna-seq pathway written 10 days ago by v82masae • 100
39
votes
0
answers
2.1k
views
48 follow
0
answers
Tutorial: Pathway Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 8 months ago by egeulgen • 660
15
votes
0
answers
1.3k
views
11 follow
0
answers
Tool: pathfindR - Pathway Enrichment Analysis using Active Subnetworks
pathway R active subnetwork tool enrichment written 11 months ago by egeulgen • 660
0
votes
0
answers
87
views
0
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Finding UP and DOWN regulated genes in a pathway incline to which group
pathway R enrichment analysis written 19 days ago by F • 3.2k
7
votes
2
answers
10k
views
6 follow
2
answers
How To Compute The Significance Of The Overlap Of The Size Of The Intersection Of Two Gene Sets.
pathway statistics written 5.5 years ago by ChIP • 490 • updated 4 months ago by Vasei • 20
0
votes
1
answer
210
views
1
answer
Map Gene names/IDs on Pathway with KEGG
pathway gene kegg written 4 months ago by Shelle • 0 • updated 4 months ago by h.mon ♦ 23k
20
votes
2
answers
8.9k
views
7 follow
2
answers
How To Use The Kegg Xml Files?
pathway kegg written 8.6 years ago by Panos • 1.6k • updated 5 months ago by RamRS ♦ 20k
4
votes
2
answers
2.0k
views
2
answers
ClusterProfiler-cnetplot output to Cytoscape?
pathway clusterprofiler written 2.3 years ago by EdS • 10 • updated 5 months ago by Max.Ka • 0
35
votes
10
answers
21k
views
18 follow
10
answers
Get All The Genes In A Pathway (E.G. Kegg)
pathway gwas kegg gene written 7.6 years ago by Stephen ♦ 2.7k • updated 5 months ago by RamRS ♦ 20k
2
votes
2
answers
236
views
2
answers
Which DE genes should be included in pathway search
pathway de rna-seq written 5 months ago by jomo018 • 470 • updated 5 months ago by grant.hovhannisyan • 1.4k
0
votes
0
answers
261
views
0
answers
GSEA analysis and pathway mapping
pathway R rna-seq written 6 months ago by ps1212 • 0
0
votes
0
answers
324
views
0
answers
How to characterise a protein "enzyme", and find evolutionary divergence into two distinct pathways?
pathway proteins enzymes protocol written 7 months ago by arpankbasak • 10
2
votes
5
answers
6.1k
views
5
answers
How to perform KEGG enrichment analyses on a set of genes
pathway enrichment kegg rna-seq R written 2.3 years ago by miyakokodama • 10 • updated 7 months ago by bigmawen • 310
0
votes
1
answer
232
views
1
answer
Metabolic Pathways From KEGG.
pathway assembly downloads written 7 months ago by waqarlodhi93 • 0 • updated 7 months ago by EagleEye ♦ 6.2k
0
votes
0
answers
374
views
0
answers
How to do protein pathway analysis rna-seq?
pathway metabolism rna-seq gene written 7 months ago by brieannsobieski • 0
3
votes
1
answer
1.9k
views
6 follow
1
answer
DAVID Fisher Exact Test contingency table
pathway stats david written 21 months ago by igor ♦ 7.3k • updated 8 months ago by Poorya Parvizi • 40
0
votes
1
answer
535
views
1
answer
Genome annotation to KEGG KO ids
genome assembly sequence kegg pathway written 9 months ago by Dattatray Mongad • 240 • updated 9 months ago by lieven.sterck ♦ 3.9k
0
votes
0
answers
286
views
0
answers
miR2Pathway and finite observations
pathway R mirna written 11 months ago by plink_9857 • 40 • updated 11 months ago by genomax ♦ 62k
0
votes
0
answers
415
views
0
answers
Creating pathway diagrams from xml file
pathway xml written 11 months ago by Natasha • 30
114
votes
20
answers
91k
views
59 follow
20
answers
Is There A Free Alternative To Ingenuity Pathway Analysis?
pathway network written 8.0 years ago by Gon • 440 • updated 11 months ago by Francis Crick • 50
1
vote
1
answer
289
views
1
answer
How to form network using tanimoto distance
pathway R network written 11 months ago by swap • 0 • updated 11 months ago by Jean-Karim Heriche ♦ 18k
2
votes
0
answers
425
views
0
answers
Pathway Analysis with an "ideal environment"
pathway rna-seq written 12 months ago by Mozart • 80
2
votes
0
answers
320
views
0
answers
Creating a pathway with requirements
pathway gfp operon iptg written 12 months ago by JongD12 • 0
5
votes
2
answers
827
views
6 follow
2
answers
Gene pathway analysis of my list of genes
pathway R genes enrichment written 12 months ago by Pin.Bioinf • 230 • updated 12 months ago by genomax ♦ 62k
2
votes
1
answer
423
views
1
answer
Reconstruct principal curves from the results of pathifier package
pathway R bioconductor pathifier principal curves written 13 months ago by arronar • 160 • updated 12 months ago by Suren • 90
0
votes
0
answers
236
views
0
answers
Pathway search for the plant genes
pathway written 12 months ago by User000 • 260
5
votes
2
answers
2.0k
views
7 follow
2
answers
pathway for single cell RNA-seq
pathway written 13 months ago by kanwarjag • 930 • updated 13 months ago by igor ♦ 7.3k
0
votes
2
answers
2.9k
views
2
answers
How to use WEGO (Web Gene Ontology Annotation Plot)
pathway gene ontology wego written 3.3 years ago by amyfm • 10 • updated 13 months ago by biokoala ♦ 3.6k
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