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How to get the genome list output table programmaticaly in PATRIC Database ?

genome patric database python written 4.6 years ago by yoan.bouzin • 0 • updated 3.1 years ago by trantrungthanh3t • 0

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922

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Difference between PATRIC's WGS and COMPLETE genomes

wgs patric genomes complete written 3.2 years ago by Eran • 0

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Command line to download fasta sequences from PATRIC DB

command patric download written 3.0 years ago by yarmda • 40

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333

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How to match proteins to a genome

proteomics patric genomics written 19 months ago by l.souza • 70

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C: Differential expression analysis by ATpoint ♦ 38k
Please use `ADD COMMENT` and not the answer field.
A: Differential expression analysis by wes • 20
Thanks for your comments. Will read through all the relevant information.
C: (Cytoscape) How to create a legend for edge width? by ATpoint ♦ 38k
https://www.biostars.org/u/65562/, please don't refresh threads. Add a comment but not the answer...
C: Chia-pipe cannot find the module pigz by lakhujanivijay ♦ 5.2k
Hi https://www.biostars.org/u/40156/ `/WGS_tools/ChIA-PIPE/0.chia_pipe_shell.sh: line 208: pigz:...
C: Chia-pipe cannot find the module pigz by bioinfo89 • 40
Yes it is the actual executable and it has execute permissions.
C: Unused argument in R by Sam • 3.1k
The parameters for rnorm is `rnorm(N, mean, sd)`. I guess what you are trying to do here is to g...
C: Unused argument in R by rpolicastro • 1.7k
Is the function `gen.norm.dat` from a library, or did you define it elsewhere? This function is l...
C: Unused argument in R by Kevin Blighe ♦ 65k
Please highlight your code and click on the `101010` button.
A: Unused argument in R by paria.alipour • 0
"repeat.gendat <- function(Nreps,N, quantilelist=c(0,1,5,50,95,99,100), distrib='norm',n.mean=...
C: Unused argument in R by Hamid Ghaedi • 220
Paria, please use "code sample" option to indicate your code lines.
C: parsing hammer 2.3.2 results using biopython by frcamacho • 190
Hi, this script works with hmmer3-text format ([https://lifebit.gitbook.io/cloudos/pipelines-docu...
C: Operation timed out by chrchang523 ♦ 7.3k
(This error doesn’t involve plink, so you should keep this post and delete the plink2-users post.)

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