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<prev • 233 results • page 1 of 8 • next >
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PCs presentation on geographic map
pca map snp written 1 day ago by melania 2282 • 80 • updated 1 day ago by ATpoint ♦ 34k
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Scale and Center [normalized] RNA-seq expression counts for PCA ?
genome R pca rna-seq sequencing written 5.3 years ago by gaelgarcia • 170 • updated 7 days ago by majeedmj.ict • 10
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How to combine different data types and perform PCA in R
data frame pca microarray rna-seq R written 12 days ago by mohammedtoufiq91 • 110
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PCA with split up chromosomes
gwas pca written 13 days ago by gradstudentNew • 30
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Eigenvalues from PLINK1.90 pca don't sum to number of variables?
pca plink written 21 days ago by c.horscroft • 0
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Error estimating covariance matrix and individual admixture proportions
pca pcangsd written 6 weeks ago by carolina.santiago.t • 0 • updated 17 days ago by Sej Modha ♦ 4.7k
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Forum: Feature Selection in 10X scRNA-seq data
scrna-seq forum pca software-error written 4 months ago by ATpoint ♦ 34k
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Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
1000 genomes tutorial pca plink ethnicity written 21 months ago by Kevin Blighe ♦ 59k
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Given microarray expressions, what is the best way to use PCA for reducing dimensionality in a dataset?
pca written 29 days ago by researcherfun • 0 • updated 29 days ago by Kevin Blighe ♦ 59k
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performing PCA by R
R pca rna-seq written 6 weeks ago by heba.m.elseedy • 10 • updated 6 weeks ago by brunobsouzaa • 150
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Ancestry inference cases-controls targeted NGS, small gene set
population structure pca ethnicity targeted ngs written 7 weeks ago by nikimourtzi23 • 0 • updated 7 weeks ago by genomax ♦ 83k
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Does the GENOtation web-based PCA tool work?
wgs pca genotation snp stanford written 8 weeks ago by omg what am I doing • 70 • updated 7 weeks ago by Kevin Blighe ♦ 59k
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Find particular SNPs affecting PCA
myposts pca snp snprelate written 4.4 years ago by lovestowell • 10 • updated 8 weeks ago by rturba07 • 0
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What is the relationship between PLINK --pca and --mds-plot in terms of % variance explained
eigenvalues pca mds plink written 10 weeks ago by gary.napier • 20 • updated 10 weeks ago by h.mon ♦ 29k
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How to do a PCA plot on the exome data using different library kits?
exome library-kit pca sequencing written 10 weeks ago by mullin.yu • 0
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PCA plot color differentiation
gwas pca plink color written 3 months ago by devarora • 150
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How many PCs should be considered for downstream analyses?
rnaseq scrnaseq pca umap clustering written 3 months ago by bioinforesearchquestions • 280 • updated 3 months ago by jared.andrews07 ♦ 5.5k
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Merge VCF file
vcf gatk pca gwas written 3 months ago by devarora • 150 • updated 3 months ago by Pierre Lindenbaum ♦ 128k
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Plink Error in PCA plot
vcf gwas pca plink written 3 months ago by devarora • 150
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192
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DESEQ2 : plotPCA
deseq2 pca rna-seq written 3 months ago by ZheFrench • 300
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Why the PCA results of PCASamples() from methylkit is different from prcomp()?
pcasamples multiplepca pca prcomp methylkit written 3 months ago by maria2019 • 100
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How to perform PCA analysis
pca rna-seq written 3 months ago by francesca3 • 20 • updated 3 months ago by Kevin Blighe ♦ 59k
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Question about interpreting PCA values in HiC data
compartments pca hic written 4 months ago by srhic • 0
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Add borders to the shapes in the PCA plot by using autoplot
ggfortify R ggplot2 pca autoplot written 4 months ago by mohammedtoufiq91 • 110 • updated 4 months ago by zx8754 ♦ 9.2k
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In PCA on RNA-Seq data, what does Gaussian distribution refer to?
pca gaussian rna-seq written 4 months ago by CY • 470 • updated 4 months ago by Devon Ryan ♦ 95k
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Why do I get different results for PC1 from plotPCA(DESeq2) and prcomp?
deseq2 pca plotpca prcomp written 4 months ago by maria2019 • 100
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Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format (old)
vcf 1000 genomes tutorial pca plink written 2.7 years ago by Kevin Blighe ♦ 59k • updated 4 months ago by caspase8mach • 0
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Which counts to use for RNA-seq heatmap and PCA?
pca rna-seq edger heatmap written 5 months ago by Lucy • 40
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Interpretation problem at PCA plot for detecting batch effect
pca rna-seq batch effect written 5 months ago by modarzi • 120
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330
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6 follow
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How to plot PCA on two or more variables
factominer pca3d pca variables R written 6 months ago by mohammedtoufiq91 • 110
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