Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: pca • reset
or   Classic search
<prev • 157 results • page 1 of 6 • next >
18
votes
2
answers
865
views
9 follow
2
answers
Tool: BioVinci: user-friendly software to make plotting easy - PCA, 3D scatter plot, venn diagram, you name it.
venn diagram tool R rna-seq gene pca written 4 months ago by Jennifer Pham • 140 • updated 1 day ago by Nancy Watson • 0
3
votes
0
answers
242
views
5 follow
0
answers
How to create PCA plot and heatmaps using only significant genes in edgeR ?
R pca edger heatmaps written 9 weeks ago by Björn • 30 • updated 7 days ago by zx8754 ♦ 4.9k
7
votes
1
answer
119
views
7 follow
1
answer
Is it possible to make a PCA plot for samples using TPM exprssion values in R?
pca tpm rna-seq written 8 days ago by rimgubaev • 70 • updated 8 days ago by andrew.j.skelton73 ♦ 5.3k
10
votes
0
answers
304
views
15 follow
0
answers
Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
1000 genomes tutorial pca plink ethnicity written 19 days ago by Kevin Blighe ♦ 28k
49
votes
0
answers
4.1k
views
45 follow
0
answers
Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format (old)
vcf 1000 genomes tutorial pca plink written 12 months ago by Kevin Blighe ♦ 28k • updated 19 days ago by genomax ♦ 55k
0
votes
0
answers
113
views
0
answers
Few SNPs after merging my samples with 1000G phase 3
1000g pca snp written 21 days ago by Phoenix Mu • 0
28
votes
5
answers
1.1k
views
15 follow
5
answers
why PCA for RNA-Seq but tSNE for scRNA-seq?
scrna-seq pca tsne rna-seq written 4 months ago by CY • 190 • updated 22 days ago by Charles Warden ♦ 5.2k
1
vote
0
answers
139
views
0
answers
How to reproduce MATLAB tsne('algorithm', 'exact') result in R?
tsne pca matlab R rtsne written 24 days ago by mk • 20
2
votes
1
answer
138
views
1
answer
Confusion About Observations vs. Variables in my Data
R beginner k-means rna-seq pca written 25 days ago by Ark • 0 • updated 25 days ago by Ram ♦ 17k
1
vote
0
answers
162
views
0
answers
Probabilistic PCA on very sparse SNP matrix
probabilistic pca pca snpstats snpmatrix written 3 months ago by dominicdhall • 40 • updated 4 weeks ago by Biostar ♦♦ 20
2
votes
1
answer
4.9k
views
1
answer
Scale and Center [normalized] RNA-seq expression counts for PCA ?
genome R pca rna-seq sequencing written 3.6 years ago by gaelgarcia • 100 • updated 5 weeks ago by Kevin Blighe ♦ 28k
4
votes
3
answers
1.1k
views
3
answers
PCA Analysis Direction
gene R pca microarray python written 2.1 years ago by Steve • 10 • updated 6 weeks ago by Biostar ♦♦ 20
2
votes
1
answer
132
views
1
answer
PCA implementation in plink
population pca plink written 6 weeks ago by prasundutta87 • 200 • updated 6 weeks ago by chrchang523 ♦ 3.9k
4
votes
0
answers
304
views
0
answers
PCA analysis for beginners
vcf R ngs pca sequencing written 7 weeks ago by Bella_p • 50 • updated 6 weeks ago by zx8754 ♦ 4.9k
2
votes
1
answer
146
views
1
answer
What values should I use for principle component analysis of microarray data?
R pca microarray written 7 weeks ago by reubenmcgregor88 • 40 • updated 7 weeks ago by Kevin Blighe ♦ 28k
10
votes
0
answers
473
views
6 follow
0
answers
The interpretation of PCA
R deseq2 pca written 11 weeks ago by Za • 90 • updated 8 weeks ago by Biostar ♦♦ 20
5
votes
1
answer
223
views
1
answer
PCA: summarize results from principal components analysis and look for population heterogeneity
principal components analysis pca plink written 9 weeks ago by filippo.corponi • 10 • updated 9 weeks ago by Kevin Blighe ♦ 28k
1
vote
1
answer
139
views
1
answer
choice of snps for pca analysis
indep-pairwise pca plink population genetics written 12 weeks ago by wrab425 • 10 • updated 12 weeks ago by Kevin Blighe ♦ 28k
0
votes
1
answer
634
views
1
answer
Sleuth PCA plots - how to change axis to percentage?
R sleuth pca kallisto rna-seq written 13 months ago by BioBing • 90 • updated 3 months ago by bruce.moran • 410
4
votes
1
answer
163
views
1
answer
PCA and statistics on SNPmatrix
pca snp written 3 months ago by dominicdhall • 40 • updated 3 months ago by leeandroid • 80
1
vote
1
answer
333
views
1
answer
How to make a PCA plot to check similar samples between two cohorts?
z-score pca microarray rna-seq written 3 months ago by Bioinfo • 240 • updated 3 months ago by Kevin Blighe ♦ 28k
2
votes
2
answers
5.6k
views
6 follow
2
answers
How To Adjust Data For Confounding Covariates Before Pca?
pca written 5.3 years ago by scottwilliamrobinson • 100 • updated 3 months ago by fansili2013 • 10
1
vote
1
answer
761
views
1
answer
Looking for software to run a multivariate linear mixed model GWAS on a Principal Component Analysis with a bimodal distribution
gwas pca snp written 15 months ago by r.harrington • 30 • updated 4 months ago by sa.kornilov • 0
6
votes
1
answer
295
views
7 follow
1
answer
rna seq replicates not clustering
pca rna-seq differential expression written 4 months ago by guillaume.rbt • 450
9
votes
6
answers
2.1k
views
5 follow
6
answers
PCA plot Fig software
figure pca written 3.1 years ago by kanwarjag • 900 • updated 4 months ago by Alex Reynolds ♦ 25k
0
votes
0
answers
225
views
0
answers
Analyse diversity in nucleotide sequences of one gene
phylogenetic tree pca snp written 6 months ago by khhgng • 60 • updated 4 months ago by Biostar ♦♦ 20
2
votes
2
answers
708
views
6 follow
2
answers
PCA Tools to analyse RNA-seq data
pca rna-seq written 9 months ago by vasanth.m.29 • 0 • updated 4 months ago by Jennifer Pham • 140
1
vote
1
answer
239
views
1
answer
getting unlinked variants and PCA analysis
phylogeny pca plink written 5 months ago by wrab425 • 10 • updated 5 months ago by chrchang523 ♦ 3.9k
0
votes
0
answers
157
views
0
answers
Genetic PCA from poolseq genotype file
pca poolseq genotype popoolation written 5 months ago by AP • 90
5
votes
1
answer
747
views
1
answer
Setting the label and value size for axis in PCA plot with fviz_pca_ind in factoextra
R pca factoextra written 5 months ago by lessismore • 490 • updated 5 months ago by Kevin Blighe ♦ 28k
<prev • 157 results • page 1 of 6 • next >
Recent Votes
Recent Locations • All »
  • Germany, Mannheim, UMM, 1 minute ago
  • Australia, 2 minutes ago
  • Belgium, 2 minutes ago
  • China, Beijing, IGDB, 4 minutes ago
  • Germany, 4 minutes ago
  • Belgium, 4 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1135 users visited in the last hour