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<prev • 253 results • page 1 of 9 • next >
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How Do I Download Protein Monomers From Pdb?
pdb protein written 5.3 years ago by kadhar • 0 • updated 1 day ago by Biostar ♦♦ 20
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4
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8 follow
4
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Perl Or Python Script To Calculate Phi,Psi Angle Of A Pdb File
pdb python perl written 6.8 years ago by Siddharth • 30 • updated 18 days ago by jamie.a • 0
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How to detect entire beta sheet (multiple strands) using STRIDE on a pdb file?
pdb stride protein dssp written 26 days ago by jl_heights • 10
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Python Tool To Assign Secondary Structure Elements To A 3D/Pdb Structure
pdb python written 4.3 years ago by dimkal • 730 • updated 5 weeks ago by Biostar ♦♦ 20
2
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1
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168
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1
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Question about blastp using pdb database
pdb 1gcn blast glucagon written 5 weeks ago by hyunilstaleykang • 0 • updated 5 weeks ago by a.zielezinski ♦ 8.2k
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How can I find full formula of the ligand in PDB files?
pdb written 3 months ago by srdjanmasirevic2 • 10 • updated 6 weeks ago by Biostar ♦♦ 20
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135
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Downloading sequences from PDB and only get protein residues and not ligand residues?
pdb residue atom protein amino acid written 7 weeks ago by furgfurg • 10
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132
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Info (Secondary structure and solvent accessibility) from DSSP
pdb python solvent accessibility protein dssp written 7 weeks ago by fabri.digua • 0
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208
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1
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Problem with PDB, DSSP and Protein solvent accessibility
pdb protein solvent accessibity dssp written 9 weeks ago by fabri.digua • 0 • updated 9 weeks ago by yamule • 180
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SIFTS (uniprot <-> pdb chain) has SP_END < SP_BEG for some mappings
pdb sifts protein mapping uniprot written 3 months ago by mtscales • 20
3
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1
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234
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Cross-reference with PDB database
pdb protein uniprot sequencing written 3 months ago by adirsommer • 10 • updated 3 months ago by Elisabeth Gasteiger • 1.4k
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Syntax For Neighborsearch Module In Biopython
pdb biopython parsing written 7.8 years ago by satsurae • 120 • updated 3 months ago by jma.bullock • 0
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199
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Chemical formula of a ligand in PDB file
pdb written 3 months ago by srdjanmasirevic2 • 10
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215
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finding invariant water molecule
3dss pdb invariant water molecule written 4 months ago by hemantkiitg • 0
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248
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PDB file modification for homology modeling
pdb 3d vmd antibody homology modeling written 4 months ago by aroso491 • 0
2
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1
answer
391
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1
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Creating PDB file for peptide bonds
pdb peptide-bonds aminoacids written 5 months ago by tayab soomro • 0 • updated 5 months ago by jrj.healey • 3.8k
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370
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Calculate Radius of Gyration [python 3]
pdb python radius of gyration biopython protein written 5 months ago by ac.research • 10
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300
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1
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News: New Alexa skill provides voice-based access to Protein Data Bank data
pdb news protein structure written 5 months ago by gregorybquinn • 0
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3
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313
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3
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3D structure for proteins
pdb 3d protein structure gene list written 6 months ago by shafnaasmy.v.s • 10 • updated 6 months ago by yamule • 180
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240
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Analyze of beta barel proteins
pdb scop alignment cath written 6 months ago by mdavari • 0
2
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1
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330
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1
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Efficient way to check pdb enzyme protein models with certain mutations if the active site still works?
pdb model homology enzyme written 7 months ago by skim • 20 • updated 6 months ago by jrj.healey • 3.8k
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253
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Helix identification from a .pdb file
pdb sse chimera written 8 months ago by nathan1000 • 0
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2
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352
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2
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PDB visualization methods
pdb visualizer structure written 9 months ago by juara • 0 • updated 9 months ago by Alex Reynolds ♦ 23k
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293
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Residues interacting with a specific ligand in a set of pdb structures
pdb discovery studio pymol ligand residues written 9 months ago by zappy • 0
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325
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Counting human proteins with at least 1 authentic bound ligand compound in PDB
pdb ligands human proteins written 11 months ago by cdsouthan • 1.8k • updated 10 months ago by Biostar ♦♦ 20
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472
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1
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PDB missing residues vs inserts
pdb written 12 months ago by rayoub • 80 • updated 10 months ago by wojdyr • 40
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How to extract x-y-z coordinates from pdb file and compute the torsion angles in matlab
pdb protein matlab written 11 months ago by pandoras13fox • 0
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366
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How to calculate the in-ring torsion angle?
angle ring pdb written 11 months ago by Karim Afifi • 0
21
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5
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10k
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9 follow
5
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How To Extract Just The Coordinate Values From A Pdb File, Using Perl Only?
pdb perl coordinates protein parsing written 7.1 years ago by Sakshi • 20 • updated 11 months ago by Biostar ♦♦ 20
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519
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1
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How to extract all Pfam Sequences with cleared PDB Structure?
pdb python pfam written 11 months ago by twinstar2 • 0
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