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<prev • 281 results • page 1 of 10 • next >
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Biopython module Bio.PDB.DSSP issue with solvent accessible surface area?
pdb python biopython dssp written 8 weeks ago by westin.kosater • 10
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How To Download Atomic Coordinates For A Specific Chain From A Pdb File?
pdb written 6.8 years ago by edweena • 10 • updated 9 weeks ago by M.O.L.S • 10
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Python: I have a list of probabilities, and I want to use them to generate mutations in a protein sequence
pdb python dssp written 10 weeks ago by westin.kosater • 10 • updated 10 weeks ago by e.benn • 110
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8 follow
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Is There A Software For 3D Printing Of Pdb Structures?
pdb written 5.8 years ago by Michael Dondrup ♦ 46k • updated 11 weeks ago by lindagrham21 • 0
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PDB files how to identify drugs among small molecules
pdb search written 3 months ago by ankithan1712 • 0
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321
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Find mapping of indices of amino acid index in PDB files and sequence
pdb python sequence written 3 months ago by JJP • 0 • updated 3 months ago by natasha.sernova • 3.4k
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Output all atoms within a sphere of 3 A of the center of Trypsine
pdb bioinformatics protein biopython python written 3 months ago by a4appy23 • 10 • updated 3 months ago by finswimmer ♦ 11k
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273
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Bio.PDB parsing PDB file
pdb biopython written 4 months ago by Gunilla • 0
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221
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1
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Putting atomic coordinates from PDB file into Pandas dataframe?
pdb python pandas written 4 months ago by westin.kosater • 10 • updated 4 months ago by RamRS ♦ 21k
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Creating a distance matrix from PDB file coordinates (Python)
pdb python written 4 months ago by westin.kosater • 10 • updated 4 months ago by jrj.healey ♦ 11k
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PDB ids and Ensembl ID for gene sequence
gene pdb ensembl written 6 months ago by kingkenshin1997 • 0 • updated 4 months ago by Emily_Ensembl ♦ 18k
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Find protein residues in PDB file that is the most exposed (and does not influence residues around it as much)
pdb sequence protein written 5 months ago by skim • 30
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Map plasmodb gene ID to pdb crystal structure if exist
gene pdb id plasmodb structure written 7 months ago by db4 • 0 • updated 5 months ago by Biostar ♦♦ 20
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Using STDIN with BioPython's PDB methods
pdb i/o stdin biopython pipes written 5 months ago by jrj.healey ♦ 11k
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235
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Primary sequence of PDB id
pdb sequence protein written 5 months ago by Bioinformatics313 • 0
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368
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How can I use biopython to extract each alpha carbon from a PDB file?
pdb python biopython written 5 months ago by westin.kosater • 10
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618
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Fetching data from https url with Python 3.7
pdb https written 6 months ago by konstanzeta • 0 • updated 6 months ago by Alex Reynolds ♦ 28k
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How to get PDB IDs for many fasta sequences?
pdb python sequence written 7 months ago by sl_99 • 0 • updated 7 months ago by RamRS ♦ 21k
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6 follow
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Problem To Convert Pdb Text File To Jmol Jar File
pdb java format file conversion written 8.7 years ago by Hazelin • 100 • updated 7 months ago by RamRS ♦ 21k
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PDB files vs MOL files.
pdb mol written 11 months ago by advait.raykar • 0 • updated 7 months ago by Biostar ♦♦ 20
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Ftp Download File Using Java Codes
pdb java written 8.8 years ago by User 4686 • 220 • updated 7 months ago by RamRS ♦ 21k
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10 follow
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How To Extract Just The Coordinate Values From A Pdb File Converted To A Text File, In Java Only?
pdb java coordinates structure parsing written 8.8 years ago by Jeremiahloh • 30 • updated 7 months ago by RamRS ♦ 21k
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Job: Software Engineer - Protein Design, Structural Bioinformatics (DNASTAR, Madison, WI)
pdb design job software protein structure written 7 months ago by darnells • 30
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562
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Get a list of PDB id from a list of sequence protein number ?
gene pdb protein tool written 7 months ago by Bioinformatics313 • 0 • updated 7 months ago by Elisabeth Gasteiger • 1.6k
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765
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How do you plot secondary structure like PDB?
pdb plot secondary strucure ribbon draw written 11 months ago by UnivStudent • 380
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script for color smyd2 protein from pdb according fluctuation
pdb protien structure color written 8 months ago by haneenjawarneh • 0
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how to get genomic position from protein pdb ID+AA residue position within the protein
pdb protein pisite protein-protein interaction written 8 months ago by lait • 130
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367
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How to optimize the homology modeling?
pdb tool homology modeling written 9 months ago by sindy_zpro • 0 • updated 9 months ago by Shamim Sarhadi • 210
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Multiple UniProt IDs for a PDB
pdb sequence written 9 months ago by tims0073 • 0
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335
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Convert multiple .mol files from the KEGG database to pdb.
pdb mol written 10 months ago by advait.raykar • 0 • updated 10 months ago by jrj.healey ♦ 11k
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