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MeDIP seq data analysis
peak peak calling aligment medip methylation written 6 months ago by iridha0 • updated 6 months ago by genomax89k
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5 follow
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Methylation Data Peak Calling
methylome peak calling bs-seq medip-seq written 6.2 years ago by Coby Viner40 • updated 9 months ago by Shicheng Guo8.3k
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ATAC-seq peak calling
peak calling macs2 atac-seq written 11 months ago by mickey_9510 • updated 11 months ago by ATpoint38k
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Calling differential peaks on large set of 3 conditions
peak calling differential macs2 written 3.4 years ago by 141341254653464453.5k • updated 14 months ago by Grinch90
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Peak calling using spp package
peak calling chip-seq spp package written 15 months ago by chaudharyc6130 • updated 15 months ago by Devon Ryan96k
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MACS2 result analysis
peak calling macs2 chip-seq tool written 16 months ago by chaudharyc6130 • updated 16 months ago by ATpoint38k
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Current status of EPIC peak caller
epic peak calling chip-seq written 3.9 years ago by ariel.balter140 • updated 17 months ago by endrebak830
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CLIP-seq peak analysis
clip-seq peak calling chip-seq written 19 months ago by mb31410 • updated 19 months ago by shawn.w.foley1.2k
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F-seq output: Meaning of bed columns
f-seq fseq peak calling written 6.0 years ago by dariober11k • updated 19 months ago by vw20
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Duplicated ATAC-Seq peaks called by MACS2
macs peak calling macs2 atac-seq written 20 months ago by Gary480 • updated 20 months ago by geek_y11k
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eCLIP peak calling
macs peak calling clip galaxy written 23 months ago by GiusiG0 • updated 20 months ago by Ashley60
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Ideas to split peaks into subpeaks - beyond PeakSplitter
peak calling wig chip-seq written 2.4 years ago by Sergio MartĂ­nez Cuesta90 • updated 21 months ago by Biostar ♦♦ 20
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Processing ATAC-seq data after peak calling
peak calling sequencing written 2.3 years ago by anais139630 • updated 2.1 years ago by phosphodiester_bond40
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Is strand important when it comes to DNAse and ChIP-Seq peak calling?
genome gene dnase chip-seq peak calling written 5.1 years ago by ashah9030 • updated 2.2 years ago by Biostar ♦♦ 20
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Empty output from MACS2 when using control
peak calling macs2 chip-seq written 4.7 years ago by lm68750 • updated 2.2 years ago by oriolebaltimore150
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weird problem with summit.bed file from macs2
software error peak calling chip-seq sequencing written 2.3 years ago by mikysyc201680 • updated 2.3 years ago by jared.andrews077.1k
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Comparison of replicates from NGS : merge before or after peak calling ?
peak calling ngs merge written 2.3 years ago by anais139630 • updated 2.3 years ago by h.mon31k
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Differential Peak Expression in ATAC-seq data
peak calling atac-seq differential expression written 3.8 years ago by ccag30 • updated 2.3 years ago by phosphodiester_bond40
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Using MACS2 for peak calling
peak calling atac-seq sequencing written 2.4 years ago by anais139630 • updated 2.4 years ago by Hussain Ather940
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Why do peak shifts occur?
peak calling written 2.6 years ago by anikethsuresh20 • updated 2.6 years ago by Friederike6.1k
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Help understanding MACS2 --extsize and --shift
peak calling macs2 atac-seq written 4.1 years ago by datascientist28460 • updated 3.1 years ago by xd_d100
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Define exact peak borders
macs peak calling written 3.2 years ago by ATpoint38k • updated 3.2 years ago by Charles Plessy2.7k
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