Showing: peak callingreset
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eCLIP peak calling
macs peak calling clip galaxy written 11 weeks ago by GiusiG0 • updated 14 days ago by Ashley40
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5 follow
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Ideas to split peaks into subpeaks - beyond PeakSplitter
peak calling wig chip-seq written 8 months ago by Sergio Martínez Cuesta60 • updated 5 weeks ago by Biostar ♦♦ 20
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6 follow
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Processing ATAC-seq data after peak calling
peak calling sequencing written 7 months ago by anais139620 • updated 5 months ago by phosphodiester_bond20
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Is strand important when it comes to DNAse and ChIP-Seq peak calling?
genome gene dnase chip-seq peak calling written 3.4 years ago by ashah9030 • updated 6 months ago by Biostar ♦♦ 20
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Empty output from MACS2 when using control
peak calling macs2 chip-seq written 3.0 years ago by lm68750 • updated 6 months ago by oriolebaltimore60
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Comparison of replicates from NGS : merge before or after peak calling ?
peak calling ngs merge written 7 months ago by anais139620 • updated 7 months ago by h.mon22k
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Differential Peak Expression in ATAC-seq data
peak calling atac-seq differential expression written 2.1 years ago by ccag30 • updated 7 months ago by phosphodiester_bond20
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Using MACS2 for peak calling
peak calling atac-seq sequencing written 8 months ago by anais139620 • updated 8 months ago by Hussain Ather890
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Why do peak shifts occur?
peak calling written 10 months ago by anikethsuresh10 • updated 10 months ago by Friederike2.4k
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Help understanding MACS2 --extsize and --shift
peak calling macs2 atac-seq written 2.4 years ago by datascientist28350 • updated 17 months ago by xd_d90
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Define exact peak borders
macs peak calling written 19 months ago by ATpoint12k • updated 19 months ago by Charles Plessy2.6k
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Problems with MACS ChIP-Seq peak calling
macs peak calling chip-seq written 19 months ago by dcheng10 • updated 19 months ago by YaGalbi1.4k
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F-seq output: Meaning of bed columns
f-seq fseq peak calling written 4.3 years ago by dariober9.8k • updated 21 months ago by Art0
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Paired end and single end with MACS2
peak calling macs2 chip-seq written 23 months ago by hannafrida.klein30 • updated 23 months ago by Ian5.3k
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peak calling for cancer and healthy data?
macs peak calling chip-seq treatment and control written 3.8 years ago by ukpersia1 20 • updated 24 months ago by EagleEye6.1k
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Understanding ATAC-seq data
peak calling atac-seq sequencing written 24 months ago by Friederike2.4k • updated 24 months ago by Charles Plessy2.6k
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How to create a bedGraph file for broadPeak peak caller?
bedgraph broadpeak chip-seq peak calling written 3.0 years ago by mrs.hope10 • updated 2.1 years ago by 5694977350
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Peak center for ATAC-seq data
peak calling chip-seq atac-seq coverage plots written 2.2 years ago by christacaggiano20 • updated 2.2 years ago by igor7.2k
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MACS2 Optimal parameter identification
clip-seq peak calling chip-seq rna-seq written 2.9 years ago by onspotproductions120 • updated 2.2 years ago by Biostar ♦♦ 20
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