Showing: peak callingreset
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Current status of EPIC peak caller
epic peak calling chip-seq written 2.5 years ago by ariel.balter140 • updated 10 days ago by endrebak740
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176
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CLIP-seq peak analysis
clip-seq peak calling chip-seq written 7 weeks ago by mb3140 • updated 7 weeks ago by shawn.w.foley420
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F-seq output: Meaning of bed columns
f-seq fseq peak calling written 4.6 years ago by dariober10.0k • updated 8 weeks ago by vw20
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283
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Duplicated ATAC-Seq peaks called by MACS2
macs peak calling macs2 atac-seq written 12 weeks ago by Gary450 • updated 11 weeks ago by geek_y9.4k
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eCLIP peak calling
macs peak calling clip galaxy written 5 months ago by GiusiG0 • updated 3 months ago by Ashley50
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5 follow
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Ideas to split peaks into subpeaks - beyond PeakSplitter
peak calling wig chip-seq written 11 months ago by Sergio MartĂ­nez Cuesta60 • updated 4 months ago by Biostar ♦♦ 20
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6 follow
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Processing ATAC-seq data after peak calling
peak calling sequencing written 10 months ago by anais139620 • updated 8 months ago by phosphodiester_bond30
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Is strand important when it comes to DNAse and ChIP-Seq peak calling?
genome gene dnase chip-seq peak calling written 3.7 years ago by ashah9030 • updated 9 months ago by Biostar ♦♦ 20
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Empty output from MACS2 when using control
peak calling macs2 chip-seq written 3.2 years ago by lm68750 • updated 10 months ago by oriolebaltimore60
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weird problem with summit.bed file from macs2
software error peak calling chip-seq sequencing written 10 months ago by mikysyc201630 • updated 10 months ago by jared.andrews072.2k
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Comparison of replicates from NGS : merge before or after peak calling ?
peak calling ngs merge written 10 months ago by anais139620 • updated 10 months ago by h.mon24k
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Differential Peak Expression in ATAC-seq data
peak calling atac-seq differential expression written 2.3 years ago by ccag30 • updated 10 months ago by phosphodiester_bond30
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Using MACS2 for peak calling
peak calling atac-seq sequencing written 12 months ago by anais139620 • updated 12 months ago by Hussain Ather910
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Normalization and differential analysis in ATAC-seq data
peak calling atac-seq differential expression written 12 months ago by anais139620 • updated 12 months ago by RamRS21k
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7 follow
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Why do peak shifts occur?
peak calling written 14 months ago by anikethsuresh10 • updated 14 months ago by Friederike3.7k
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Help understanding MACS2 --extsize and --shift
peak calling macs2 atac-seq written 2.7 years ago by datascientist28380 • updated 20 months ago by xd_d90
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Define exact peak borders
macs peak calling written 22 months ago by ATpoint15k • updated 22 months ago by Charles Plessy2.7k
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Problems with MACS ChIP-Seq peak calling
macs peak calling chip-seq written 23 months ago by dcheng10 • updated 23 months ago by YaGalbi1.4k
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Paired end and single end with MACS2
peak calling macs2 chip-seq written 2.2 years ago by hannafrida.klein30 • updated 2.2 years ago by Ian5.4k
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peak calling for cancer and healthy data?
macs peak calling chip-seq treatment and control written 4.1 years ago by ukpersia1 20 • updated 2.2 years ago by EagleEye6.2k
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17 follow
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Understanding ATAC-seq data
peak calling atac-seq sequencing written 2.2 years ago by Friederike3.7k • updated 2.2 years ago by Charles Plessy2.7k
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How to create a bedGraph file for broadPeak peak caller?
bedgraph broadpeak chip-seq peak calling written 3.2 years ago by mrs.hope10 • updated 2.4 years ago by 5694977350
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Peak center for ATAC-seq data
peak calling chip-seq atac-seq coverage plots written 2.4 years ago by christacaggiano20 • updated 2.4 years ago by igor7.6k
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MACS2 Optimal parameter identification
clip-seq peak calling chip-seq rna-seq written 3.1 years ago by onspotproductions130 • updated 2.5 years ago by Biostar ♦♦ 20
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