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written 15 months ago by
rpalmavejares • 20
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8 weeks ago by
h.mon ♦ 22k
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210
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written 4 months ago by
elenatea.russo • 10
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tarakjang • 0
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written 8 months ago by
Yunqing Yu • 0
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5 months ago by
Michael Dondrup ♦ 45k
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written 11 months ago by
Xiaokang ZH • 40
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9 months ago by
Biostar ♦♦ 20
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written 10 months ago by
rayoub • 100
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10 months ago by
Bill Pearson • 830
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written 15 months ago by
Selenocysteine • 510
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14 months ago by
Puli Chandramouli Reddy • 150
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written 2.5 years ago by
genomeandahalf • 40
• updated
2.4 years ago by
Biostar ♦♦ 20
Recent Votes
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Recent Replies
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C: SPLiT-Seq Demultiplexing a bash tool for extraction of barcoded single cells by
rainwashautumn • 0
Thanks a lot for your meticulously reply. Now I have noticed that the full dataset which is used...
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C: bedtools coverage gives error received illegal bin number, but that number isn't by
Alex Reynolds ♦ 27k
You can also use `awk` to fix the input before running it through `bedops`: $ awk -vFS="\t" ...
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C: Shotgun metagenomics: Why bother with de novo assembly? by
jrj.healey ♦ 9.9k
16S still has its place for sure. You can’t beat it for cost. But, there’s no way around the abun...
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A: bedtools coverage gives error received illegal bin number, but that number isn't by
pangxy3 • 0
I got same error when using subtract of bedtools. And I have tried to use bedops to check one of...
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C: Is it ok to use DREME to predict motifs from RNA-Seq data? by
ytzhao • 0
Hello, I guess that you mean you now have several genes, in fasta format. you wanna find motif fr...
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A: network with cytoscape by
jpreethi569 • 0
Great information. I'm learning a lot from here. Do share more. https://www.fita.in/placement-tra...
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C: How The Non-Canonical Intron Splice Sites Came Out? by
ytzhao • 0
I appreciate your kind comment, but the url you gave was out of service now, would you like to se...
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C: How to separate sequences of two species from Metagenomics Analysis? by
shenwei356 ♦ 4.4k
Try mapping to E.coli first, check the coverage (they may share some genes), and assemble with un...
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chrchang523 ♦ 4.3k
It’s plink 2.0, not 1.9, that has all the major optimizations for —linear. Using v2.0 for this s...
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C: how to change the sequence ID and order of sequences in a file to match an align by
finswimmer ♦ 8.9k
The desired output looks like it is just sorted sorted by sequence name. Shouldn't be `seqkit sor...
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C: Finding 16 mer not present in GRCh38 by
shenwei356 ♦ 4.4k
I found out 14-mers on my 48GB RAM PC, you can easily extend them to 16-mers. https://www.biosta...
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C: Missing data in covariate file in PLINK by
landscape95 • 150
Thank you very much! I have read this document but according to it, the --missing-phenotype will ...
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