Showing: phasingreset
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haplotype phasing in duos
haplotype phasing duos rna-seq trios written 12 weeks ago by lait80 • updated 17 days ago by mike40
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How do variant callers get genotype info?
variant calling indel snp phasing written 6 weeks ago by afzm20 • updated 6 weeks ago by Jeremy Leipzig17k
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Convert IMPUTE2 to VCF while keeping phase information
vcf impute2 phasing conversion written 2.6 years ago by lkmklsmn810 • updated 8 weeks ago by Biostar ♦♦ 20
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use gatk phased vcf as input file of HapCut2
hapcut2 gatk vcf phasing written 10 weeks ago by Peter Chung70 • updated 9 weeks ago by Ram16k
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extractPIRs is throwing an ERROR
shapeit extractpirs phasing written 3 months ago by nkausthu20 • updated 3 months ago by genomax52k
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Phasing without a reference panel
hapmap population genotype phasing written 5 months ago by chadapohn.chaosrikul0 • updated 5 months ago by Wietje150
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Plink. Convert ped files of artificially mixed population into vcf using recode
vcf plink phasing written 6 months ago by Mr Locuace80 • updated 6 months ago by Wietje150
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Problem phasing Indels
indels phasing beagle written 7 months ago by hdtms 20
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Can phasing or pre-phase during basecall cause indel?
indel phasing written 7 months ago by CY140 • updated 7 months ago by Kevin Blighe24k
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phasing variants to find de novos
de novo ngs phasing whole exome sequencing written 8 months ago by lait80 • updated 8 months ago by Len Trigg1.2k
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error when using shapeit2 phasing with vcf from GATK
vcf shapeit phasing written 12 months ago by Loveinheaven0 • updated 12 months ago by h.mon16k
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HapCUT2 using GATK results
hapcut2 gatk vcf phasing written 18 months ago by jyu429120 • updated 12 months ago by lloydlow0
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