Showing: phasingreset
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use gatk phased vcf as input file of HapCut2
hapcut2 gatk vcf phasing written 15 days ago by Peter Chung70 • updated 5 days ago by Ram15k
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extractPIRs is throwing an ERROR
shapeit extractpirs phasing written 5 weeks ago by nkausthu20 • updated 5 weeks ago by genomax47k
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Phasing without a reference panel
hapmap population genotype phasing written 3 months ago by chadapohn.chaosrikul0 • updated 3 months ago by Wietje120
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Plink. Convert ped files of artificially mixed population into vcf using recode
vcf plink phasing written 4 months ago by Mr Locuace80 • updated 4 months ago by Wietje120
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Problem phasing Indels
indels phasing beagle written 5 months ago by hdtms 10
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Can phasing or pre-phase during basecall cause indel?
indel phasing written 5 months ago by CY130 • updated 5 months ago by Kevin Blighe19k
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phasing variants to find de novos
de novo ngs phasing whole exome sequencing written 6 months ago by lait80 • updated 6 months ago by Len Trigg1.1k
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error when using shapeit2 phasing with vcf from GATK
vcf shapeit phasing written 9 months ago by Loveinheaven0 • updated 9 months ago by h.mon14k
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HapCUT2 using GATK results
hapcut2 gatk vcf phasing written 16 months ago by jyu429120 • updated 10 months ago by lloydlow0
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Tool: Read-based phasing with WhatsHap
tool phasing written 17 months ago by Marcel M70 • updated 17 months ago by t.marschall20
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How to add custom fields to the VCF files?
vcf annotation phasing snp manipulation written 21 months ago by kirannbishwa01790 • updated 20 months ago by Biostar ♦♦ 20
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