Showing: phasingreset
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7
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How to add custom fields to the VCF files?
vcf annotation phasing snp manipulation written 2.1 years ago by kirannbishwa01860 • updated 16 days ago by sm.hashemin60
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103
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phase a non-model genome
phasing written 19 days ago by devon.orourke0
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58
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124
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120
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1
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haplotype phasing in duos
haplotype phasing duos rna-seq trios written 4 months ago by lait120 • updated 11 weeks ago by mike40
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259
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0
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163
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6
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227
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5 follow
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How do variant callers get genotype info?
variant calling indel snp phasing written 3 months ago by afzm20 • updated 3 months ago by Jeremy Leipzig17k
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181
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9
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Convert IMPUTE2 to VCF while keeping phase information
vcf impute2 phasing conversion written 2.8 years ago by lkmklsmn820 • updated 4 months ago by Biostar ♦♦ 20
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245
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use gatk phased vcf as input file of HapCut2
hapcut2 gatk vcf phasing written 4 months ago by Peter Chung70 • updated 4 months ago by RamRS17k
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258
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0
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139
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extractPIRs is throwing an ERROR
shapeit extractpirs phasing written 5 months ago by nkausthu20 • updated 5 months ago by genomax55k
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348
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0
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4
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1
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637
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1
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Phasing without a reference panel
hapmap population genotype phasing written 7 months ago by chadapohn.chaosrikul0 • updated 7 months ago by Wietje150
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396
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1
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Plink. Convert ped files of artificially mixed population into vcf using recode
vcf plink phasing written 8 months ago by Mr Locuace80 • updated 8 months ago by Wietje150
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0
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420
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0
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Problem phasing Indels
indels phasing beagle written 9 months ago by hdtms 20
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411
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9
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1
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500
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6 follow
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Can phasing or pre-phase during basecall cause indel?
indel phasing written 9 months ago by CY190 • updated 9 months ago by Kevin Blighe28k
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438
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0
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403
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11
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5 follow
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phasing variants to find de novos
de novo ngs phasing whole exome sequencing written 11 months ago by lait120 • updated 11 months ago by Len Trigg1.2k
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519
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436
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555
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error when using shapeit2 phasing with vcf from GATK
vcf shapeit phasing written 14 months ago by Loveinheaven0 • updated 14 months ago by h.mon19k
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546
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1
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0
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452
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0
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1
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HapCUT2 using GATK results
hapcut2 gatk vcf phasing written 20 months ago by jyu429120 • updated 14 months ago by lloydlow0
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468
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