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<prev • 314 results • page 1 of 11 • next >
4
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143
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RAxML multi-threading option in HPC cluster
phylogenetics raxml written 15 days ago by MAPK • 1.2k
3
votes
1
answer
107
views
1
answer
How to tell the best model for ML analysis using RaxML?
phylogenetics raxml modeltest written 15 days ago by MAPK • 1.2k • updated 15 days ago by Michael Dondrup ♦ 44k
4
votes
1
answer
134
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1
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Strategies for identifying as many homologs as possible
homology phylogenetics est msa blast written 17 days ago by michael • 0 • updated 17 days ago by Michael Dondrup ♦ 44k
2
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0
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96
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0
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Generate all NNI-neighbours of a tree
nni phylogenetics tree newick written 19 days ago by phylomat • 0
1
vote
1
answer
171
views
1
answer
Phylogenetic analysis for large size fasta sequences
phylogenetics written 25 days ago by MAPK • 1.2k • updated 25 days ago by h.mon ♦ 15k
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3.4k
views
2
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Collapsing poorly supported nodes into polytomies in R - using 'Phangorn' and 'ape'
polytomies R phylogenetics phangorn ape written 3.7 years ago by confusedious • 390 • updated 4 weeks ago by emre.cto • 0
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60
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0
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Minimum mutation count for each alignment site over a given tree
phylogenetics written 4 weeks ago by painlessprose • 10
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0
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199
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0
answers
Job: Computational Postdoc | AndersenLab @ Scripps La Jolla
viruses phylogenetics job sequencing written 7 weeks ago by kga1978 • 80
5
votes
1
answer
203
views
5 follow
1
answer
Is there gold standard data for ancestral reconstruction?
gene evolution phylogenetics protein written 9 weeks ago by chahatupretiiitk • 50 • updated 8 weeks ago by Jean-Karim Heriche ♦ 15k
1
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0
answers
99
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0
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ETE3 compare stop filename truncation
congruency phylogenetics comparison trees written 10 weeks ago by jrj.healey • 4.6k
0
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0
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130
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0
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Identifying mutations between haplotypes using haploNet (pegas) in R
haplotypes R pegas phylogenetics written 3 months ago by GabrielMontenegro • 400
10
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1
answer
2.9k
views
1
answer
Phylogenetic Tree Comparison
similarity phylogenetics graphs written 6.4 years ago by Mehdi • 10 • updated 3 months ago by Biostar ♦♦ 20
5
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3
answers
3.4k
views
3
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Constructing Phylogenetic Tree Based On Pathogenicity Genes Of A Fungus
phylogeny domain phylogenetics genbank genome written 5.3 years ago by Natasya Azwin • 10 • updated 3 months ago by Biostar ♦♦ 20
1
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0
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231
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0
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Correspondence between unlabeled/different tips of different phylogenetic trees
gene phylogenetics sequence trees written 3 months ago by rfm • 0
1
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0
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312
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0
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Job: Cluster hire for new U19 Center for Systems Biology
systems biology R phylogenetics job python written 3 months ago by kga1978 • 80
51
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8
answers
16k
views
26 follow
8
answers
Phylogenetic Analysis Of Whole Genomes
phylogenetics tree written 7.9 years ago by Aparna • 120 • updated 4 months ago by Eli Korvigo • 120
4
votes
1
answer
504
views
1
answer
if you were making evolutionary trees how would you make sure they were accurate and not based on convergent evolution?
evolution phylogenetics convergent evolution tree written 18 months ago by nhilaski • 0 • updated 4 months ago by Biostar ♦♦ 20
12
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2
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3.3k
views
6 follow
2
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Mafft Output Distance Matrix
phylogenetics alignment distance written 7.3 years ago by Gabriel Mitchell • 520 • updated 4 months ago by Ghoti • 40
2
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1
answer
273
views
1
answer
Neighbor Joining algorithm: why n-2?
neighbor-joining phylogenetics evolution written 5 months ago by michael • 0 • updated 5 months ago by kloetzl • 960
2
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2
answers
377
views
2
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How to root a tree in R with a polytomy at the root
R phylogenetics written 5 months ago by hyanwong • 60
1
vote
1
answer
225
views
1
answer
Programs to calculate clade age
phylogenetics written 5 months ago by apulunuj • 0 • updated 5 months ago by Kevin Blighe ♦ 22k
1
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0
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308
views
0
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Error in PhyML
phyml error phylogenetics written 7 months ago by majeedaasim • 20 • updated 6 months ago by Biostar ♦♦ 20
0
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0
answers
369
views
0
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Minimum spanning tree - coloring the nodes
R phylogenetics graph mst written 6 months ago by tpaisie • 70
2
votes
1
answer
874
views
1
answer
how to get nekwick file for our sequence file
nwk file format phylogenetics mega myposts written 2.4 years ago by arpitha.hebbar.g • 0 • updated 6 months ago by Biostar ♦♦ 20
0
votes
1
answer
690
views
1
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How to create *.dist file?
sequence mothur phylogenetics distance matrix written 23 months ago by ag1805x • 80 • updated 7 months ago by Simply Bioinformatics • 80
12
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0
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547
views
7 follow
0
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How do I generate all possible Newick Tree permutations for a set of species given an outgroup in Python?
phylogeny python phylogenetics tree newick written 8 months ago by MrDoe777 • 50
0
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0
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327
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0
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Incompartible results: PhyML vs BLAST
phylogenetics phyml blast written 8 months ago by atgc • 0
0
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2
answers
464
views
2
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Unable to install SNPhylo in ubuntu
phylogenetics written 9 months ago by sukesh1411 • 30 • updated 9 months ago by leeandroid • 80
0
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0
answers
567
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0
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News: Course: Geometric Morphometrics. 5-9 March 2018, Berlin (Germany)
geometricmorphometics R news phylogenetics written 9 months ago by carlopecoraro2 • 710
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2
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4.7k
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5 follow
2
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Deleting The 3Rd Codon Position In A Multiple Sequence Alignment And Substitution Saturation
phylogenetics written 7.2 years ago by Kartik Sunagar • 290 • updated 9 months ago by al-ash • 30
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