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stacked barplot color choice
R metagenomics 16s phyloseq written 1 day ago by DC720 • updated 1 day ago by antonioggsousa240
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mothur output visualisation with Phyloseq: unable to order the x-axis
R 16s mothur phyloseq written 10 days ago by DC720 • updated 10 days ago by Asaf8.0k
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ERROR:Error in x[seq_len(n)] : object of type 'S4' is not subsettable
page mothur phyloseq 16s rrna heatmap written 13 days ago by DC720 • updated 13 days ago by Joe17k
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PCoA plot with phyla abundance
vegan R phyloseq written 4 months ago by Bioinfonext220
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Removing unassigned OTUs
phyloseq R next-gen otu microbiome written 24 months ago by rahulgenexpress10 • updated 24 months ago by zx87549.3k
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Phyloseq Weighted Unifrac Ordination Error
unifrac phyloseq pcoa ordination ape written 2.5 years ago by mzmd40 • updated 2.4 years ago by Kevin Blighe61k
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Plots in R using phyloseq
R phyloseq written 2.5 years ago by arunsaikirans0
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Names are not identical in mapping file and the otu file.
R phyloseq qiime written 2.5 years ago by arunsaikirans0 • updated 2.5 years ago by Hussain Ather940
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Anyone with experience in Phyloseq in R?
R phyloseq qiime written 4.0 years ago by espop2360 • updated 3.0 years ago by Bioinformatics_NewComer320
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Convert mothur classify.seqs output to BIOM format
R metagenomics mothur phyloseq written 3.2 years ago by pkozyrev10 • updated 3.2 years ago by h.mon30k
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How to plot UniFrac PCoA with 95% confidence Elipses in R
vegan R metagenomics phyloseq ordiellipse written 5.5 years ago by c.v.oflynn90 • updated 5.3 years ago by Biostar ♦♦ 20
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