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Recent Votes
- C: Extract N amino acids from fasta file
- A: Extract N amino acids from fasta file
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- C: Are gene symbol and HGNC symbol the same names for a gene?
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Recent Replies
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C: Are gene symbol and HGNC symbol the same names for a gene? by
maryammomeni23 • 0
Thanks a lot for your answer. As you said I think the GEO2R has confused the two. : $ seqkit subseq -r 1:30 inpu...
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C: Extract N amino acids from fasta file by
shenwei356 ♦ 5.0k
`seqkit subseq -r 1:20` is enough.
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A: Extract N amino acids from fasta file by
yztxwd • 230
awk '{if(/>.*/) {print} else {print substr($0, 1, 30)} }' test.fa test.fa >a4761...
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C: how to remove N loci in a global alignment for all strains by
yztxwd • 230
Do all alignments have the same length? if it is, you can try this grep -v ">" test.fa |...
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C: Is there a way to convert a FASTQ file to FASTA file? by
swbarnes2 ♦ 7.0k
No. Do not reinvent the wheel. Google for programs that will do what you want. You can likely ...
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A: estimate tumor purity from capture panel data using tumor-only mode by
markus.riester • 480
If you have at least a few processed-matched normals, you can try https://github.com/lima1/PureCN...
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C: ChIP-seq lack of nucleosome depleted region by
yztxwd • 230
You can't see nucleosome depleted region and +1 nucleosome (the peak in your plot doesn't look li...
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C: Is there a way to convert a FASTQ file to FASTA file? by
as2779 • 0
Ah that makes sense. Is there some sort of tool to assembly contigs from FASTQ files? I'm also mo...
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A: how to remove N loci in a global alignment for all strains by
Sishuo Wang • 180
Maybe [trimseq][1]? [1]: http://emboss.sourceforge.net/apps/cvs/emboss/apps/trimseq.html
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