Showing selected topics • reset
<prev • 62 results • page 1 of 3 • next >
0
votes
0
answers
106
views
0
answers
Pysam pileup dropping reads
pysam pileup written 9 weeks ago by yryan0
0
votes
0
answers
146
views
0
answers
0
votes
1
answer
311
views
1
answer
Difference between Pysam Pileup and Fetch
reads bam pysam pileup written 6 months ago by aalith10 • updated 4 months ago by castaway19900
2
votes
1
answer
281
views
1
answer
3
votes
2
answers
564
views
2
answers
samtools mpileup keeps making an empty file
samtools pileup written 15 months ago by James Reeve100 • updated 15 months ago by gab20
5
votes
1
answer
7.4k
views
5 follow
1
answer
Pileup To Vcf Format
vcf pileup written 9.0 years ago by Pri20 • updated 17 months ago by Mbillah110
2
votes
4
answers
1.3k
views
5 follow
4
answers
1
vote
2
answers
1.2k
views
2
answers
Samtools 1.3 mpileup result < >
next-gen samtools rna-seq pileup sequencing written 4.1 years ago by yanweng40 • updated 18 months ago by RamRS26k
0
votes
2
answers
2.4k
views
2
answers
Mapping Reads Back To Assembly Contigs To Generate Pileup
pileup bwa coverage written 8.0 years ago by Sen0 • updated 18 months ago by Biostar ♦♦ 20
8
votes
3
answers
2.2k
views
3
answers
1
vote
0
answers
419
views
0
answers
0
votes
0
answers
538
views
0
answers
pileup vs. IGV insertion locations
pileup igv written 24 months ago by blur110
0
votes
0
answers
592
views
0
answers
0
votes
1
answer
1.1k
views
1
answer
Finding SNPs in population data: help with pipeline
genome population snp pileup written 2.9 years ago by Alex0 • updated 2.3 years ago by Pierre Lindenbaum127k
9
votes
2
answers
6.4k
views
7 follow
2
answers
Samtools Mpileup And Overlapping Paired-End Reads
paired-end pileup rna-seq written 6.4 years ago by alpha2zee120 • updated 2.4 years ago by Owen S.350
0
votes
0
answers
2.4k
views
0
answers
Pysam read reference positions and sequence do not match
samtools pysam pileup tview written 2.5 years ago by rlorigro0 • updated 2.4 years ago by Biostar ♦♦ 20
5
votes
1
answer
1.1k
views
5 follow
1
answer
Nucleotide coverage if >5 reads
alignment sequence pileup written 2.5 years ago by Vca805530 • updated 2.5 years ago by Pierre Lindenbaum127k
0
votes
1
answer
717
views
1
answer
4
votes
1
answer
1.1k
views
1
answer
Samtools mpileup output: missing fields?
rnaseq samtools pileup mpileup written 2.6 years ago by cjaln0 • updated 2.6 years ago by John Marshall1.9k
1
vote
1
answer
1.2k
views
1
answer
pileup format: what's the difference between upper and lower case?
samtools pileup written 2.9 years ago by blur110 • updated 2.9 years ago by Devon Ryan94k
0
votes
1
answer
749
views
1
answer
2
votes
1
answer
3.4k
views
1
answer
What does "pileup" mean in the context of MACS2 peak caller?
macs2 chip-seq pileup written 3.0 years ago by ariel.balter140 • updated 3.0 years ago by Santosh Anand5.0k
1
vote
2
answers
2.7k
views
2
answers
filtering pileup file with samtools for SomaticSniper
somaticsniper samtools snp pileup written 4.5 years ago by TriS4.2k • updated 3.4 years ago by guangxujin0
1
vote
1
answer
1.0k
views
1
answer
Pileup format parsing difficulty
samtools pileup written 3.5 years ago by maheetha.b70 • updated 3.5 years ago by John Marshall1.9k
16
votes
3
answers
6.8k
views
5 follow
3
answers
8
votes
1
answer
3.9k
views
1
answer
(samtools) Filtering and interpreting >100 QUAL scores
vcf phred-scaled qual samtools pileup written 4.2 years ago by umn_bist370 • updated 4.2 years ago by Brice Sarver3.5k
1
vote
1
answer
5.5k
views
1
answer
understanding pysam pileup()
pysam pileup written 4.3 years ago by geek_y10k
0
votes
0
answers
2.4k
views
0
answers
1
vote
3
answers
3.0k
views
3
answers
How To Pile Up Multiple Bed Files Into 1 File
bed intersect sam bam pileup written 7.9 years ago by Hanfei Sun60 • updated 4.5 years ago by Biostar ♦♦ 20
1
vote
1
answer
4.5k
views
1
answer
Masked Or Unmasked Dna Reference For Sam2Vcf.Pl
vcf samtools pileup written 8.9 years ago by Pi510 • updated 4.5 years ago by Biostar ♦♦ 20
<prev • 62 results • page 1 of 3 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1167 users visited in the last hour