Showing: pileupreset
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Samtools Mpileup And Overlapping Paired-End Reads
paired-end pileup rna-seq written 4.0 years ago by alpha2zee90 • updated 3 days ago by Owen S.320
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Pysam read reference positions and sequence do not match
samtools pysam pileup tview written 4 weeks ago by rlorigro0 • updated 19 days ago by Biostar ♦♦ 20
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Nucleotide coverage if >5 reads
alignment sequence pileup written 4 weeks ago by Vca805530 • updated 4 weeks ago by Pierre Lindenbaum100k
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Samtools mpileup output: missing fields?
rnaseq samtools pileup mpileup written 10 weeks ago by cjaln0 • updated 10 weeks ago by John Marshall1.1k
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pileup format: what's the difference between upper and lower case?
samtools pileup written 6 months ago by blur60 • updated 6 months ago by Devon Ryan73k
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Finding SNPs in population data: help with pipeline
genome population snp pileup written 6 months ago by Alex0 • updated 6 months ago by Biostar ♦♦ 20
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What does "pileup" mean in the context of MACS2 peak caller?
macs2 chip-seq pileup written 7 months ago by ariel.balter110 • updated 7 months ago by Santosh Anand3.0k
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filtering pileup file with samtools for SomaticSniper
somaticsniper samtools snp pileup written 2.1 years ago by TriS3.1k • updated 12 months ago by guangxujin0
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Pileup format parsing difficulty
samtools pileup written 13 months ago by maheetha.b30 • updated 13 months ago by John Marshall1.1k
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Samtools 1.3 mpileup result < >
next-gen samtools rna-seq pileup sequencing written 21 months ago by yanweng20 • updated 21 months ago by alebuenosm20
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(samtools) Filtering and interpreting >100 QUAL scores
vcf phred-scaled qual samtools pileup written 22 months ago by umn_bist260 • updated 22 months ago by Brice Sarver2.4k
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understanding pysam pileup()
pysam pileup written 23 months ago by geek_y8.1k
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How To Pile Up Multiple Bed Files Into 1 File
bed intersect sam bam pileup written 5.5 years ago by Hanfei Sun60 • updated 2.1 years ago by Biostar ♦♦ 20
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Masked Or Unmasked Dna Reference For Sam2Vcf.Pl
vcf samtools pileup written 6.5 years ago by Pi510 • updated 2.2 years ago by Biostar ♦♦ 20
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meaning of new symbols in samtools mpileup format?
samtools snp pileup htslib written 3.3 years ago by Dejian1.2k • updated 3.3 years ago by Devon Ryan73k
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Samtools Pileup Of Millions Of Reads From A Single Amplicon
samtools pileup sequencing written 3.8 years ago by Sebastian10 • updated 3.8 years ago by Christian2.6k
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Pileup To Vcf Format
vcf pileup written 6.6 years ago by Pri20 • updated 4.0 years ago by Biostar ♦♦ 20
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How To Generate A Consensus Sequence On The Galaxy Platform
galaxy pileup written 4.3 years ago by thelittledoctor0 • updated 4.0 years ago by Biostar ♦♦ 20
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Sra-Pileup Question
pileup written 4.1 years ago by Sergei Lebedev30 • updated 4.1 years ago by Matt Shirley7.9k
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Imitate Pileup Format
samtools mpileup pileup written 4.2 years ago by Lee Katz2.8k • updated 4.2 years ago by polarise370
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