Showing: pileupreset
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pileup vs. IGV insertion locations
pileup igv written 10 weeks ago by blur90
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Finding SNPs in population data: help with pipeline
genome population snp pileup written 13 months ago by Alex0 • updated 6 months ago by Pierre Lindenbaum108k
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7 follow
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Samtools Mpileup And Overlapping Paired-End Reads
paired-end pileup rna-seq written 4.6 years ago by alpha2zee100 • updated 7 months ago by Owen S.330
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Pysam read reference positions and sequence do not match
samtools pysam pileup tview written 8 months ago by rlorigro0 • updated 7 months ago by Biostar ♦♦ 20
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Nucleotide coverage if >5 reads
alignment sequence pileup written 8 months ago by Vca805530 • updated 8 months ago by Pierre Lindenbaum108k
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Samtools mpileup output: missing fields?
rnaseq samtools pileup mpileup written 9 months ago by cjaln0 • updated 9 months ago by John Marshall1.2k
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pileup format: what's the difference between upper and lower case?
samtools pileup written 13 months ago by blur90 • updated 13 months ago by Devon Ryan81k
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What does "pileup" mean in the context of MACS2 peak caller?
macs2 chip-seq pileup written 14 months ago by ariel.balter130 • updated 14 months ago by Santosh Anand3.5k
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filtering pileup file with samtools for SomaticSniper
somaticsniper samtools snp pileup written 2.7 years ago by TriS3.4k • updated 19 months ago by guangxujin0
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Pileup format parsing difficulty
samtools pileup written 20 months ago by maheetha.b50 • updated 20 months ago by John Marshall1.2k
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Samtools 1.3 mpileup result < >
next-gen samtools rna-seq pileup sequencing written 2.3 years ago by yanweng20 • updated 2.3 years ago by alebuenosm20
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(samtools) Filtering and interpreting >100 QUAL scores
vcf phred-scaled qual samtools pileup written 2.4 years ago by umn_bist310 • updated 2.4 years ago by Brice Sarver2.4k
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understanding pysam pileup()
pysam pileup written 2.5 years ago by geek_y8.6k
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How To Pile Up Multiple Bed Files Into 1 File
bed intersect sam bam pileup written 6.1 years ago by Hanfei Sun60 • updated 2.7 years ago by Biostar ♦♦ 20
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Masked Or Unmasked Dna Reference For Sam2Vcf.Pl
vcf samtools pileup written 7.1 years ago by Pi510 • updated 2.8 years ago by Biostar ♦♦ 20
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meaning of new symbols in samtools mpileup format?
samtools snp pileup htslib written 3.8 years ago by Dejian1.2k • updated 3.8 years ago by Devon Ryan81k
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Samtools Pileup Of Millions Of Reads From A Single Amplicon
samtools pileup sequencing written 4.3 years ago by Sebastian10 • updated 4.3 years ago by Christian2.6k
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