Showing: pileupreset
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samtools mpileup keeps making an empty file
samtools pileup written 5 weeks ago by James Reeve40 • updated 5 weeks ago by gab20
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5 follow
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Pileup To Vcf Format
vcf pileup written 7.9 years ago by Pri20 • updated 3 months ago by Mbillah110
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Samtools 1.3 mpileup result < >
next-gen samtools rna-seq pileup sequencing written 3.0 years ago by yanweng30 • updated 4 months ago by RamRS20k
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Mapping Reads Back To Assembly Contigs To Generate Pileup
pileup bwa coverage written 6.9 years ago by Sen0 • updated 5 months ago by Biostar ♦♦ 20
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pileup vs. IGV insertion locations
pileup igv written 10 months ago by blur90
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Finding SNPs in population data: help with pipeline
genome population snp pileup written 22 months ago by Alex0 • updated 14 months ago by Pierre Lindenbaum116k
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Samtools Mpileup And Overlapping Paired-End Reads
paired-end pileup rna-seq written 5.2 years ago by alpha2zee100 • updated 15 months ago by Owen S.340
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Pysam read reference positions and sequence do not match
samtools pysam pileup tview written 16 months ago by rlorigro0 • updated 15 months ago by Biostar ♦♦ 20
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Nucleotide coverage if >5 reads
alignment sequence pileup written 16 months ago by Vca805530 • updated 16 months ago by Pierre Lindenbaum116k
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Samtools mpileup output: missing fields?
rnaseq samtools pileup mpileup written 17 months ago by cjaln0 • updated 17 months ago by John Marshall1.5k
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pileup format: what's the difference between upper and lower case?
samtools pileup written 21 months ago by blur90 • updated 21 months ago by Devon Ryan88k
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What does "pileup" mean in the context of MACS2 peak caller?
macs2 chip-seq pileup written 22 months ago by ariel.balter130 • updated 22 months ago by Santosh Anand4.6k
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filtering pileup file with samtools for SomaticSniper
somaticsniper samtools snp pileup written 3.4 years ago by TriS3.6k • updated 2.3 years ago by guangxujin0
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Pileup format parsing difficulty
samtools pileup written 2.4 years ago by maheetha.b60 • updated 2.4 years ago by John Marshall1.5k
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(samtools) Filtering and interpreting >100 QUAL scores
vcf phred-scaled qual samtools pileup written 3.1 years ago by umn_bist320 • updated 3.1 years ago by Brice Sarver2.5k
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understanding pysam pileup()
pysam pileup written 3.1 years ago by geek_y9.1k
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How To Pile Up Multiple Bed Files Into 1 File
bed intersect sam bam pileup written 6.8 years ago by Hanfei Sun60 • updated 3.3 years ago by Biostar ♦♦ 20
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Masked Or Unmasked Dna Reference For Sam2Vcf.Pl
vcf samtools pileup written 7.8 years ago by Pi510 • updated 3.4 years ago by Biostar ♦♦ 20
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meaning of new symbols in samtools mpileup format?
samtools snp pileup htslib written 4.5 years ago by Dejian1.2k • updated 4.5 years ago by Devon Ryan88k
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