Showing: pileupreset
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Finding SNPs in population data: help with pipeline
genome population snp pileup written 10 months ago by Alex0 • updated 12 weeks ago by Pierre Lindenbaum104k
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Samtools Mpileup And Overlapping Paired-End Reads
paired-end pileup rna-seq written 4.2 years ago by alpha2zee100 • updated 3 months ago by Owen S.330
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Pysam read reference positions and sequence do not match
samtools pysam pileup tview written 4 months ago by rlorigro0 • updated 3 months ago by Biostar ♦♦ 20
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Nucleotide coverage if >5 reads
alignment sequence pileup written 4 months ago by Vca805530 • updated 4 months ago by Pierre Lindenbaum104k
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Samtools mpileup output: missing fields?
rnaseq samtools pileup mpileup written 5 months ago by cjaln0 • updated 5 months ago by John Marshall1.2k
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pileup format: what's the difference between upper and lower case?
samtools pileup written 9 months ago by blur60 • updated 9 months ago by Devon Ryan76k
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What does "pileup" mean in the context of MACS2 peak caller?
macs2 chip-seq pileup written 10 months ago by ariel.balter120 • updated 10 months ago by Santosh Anand3.4k
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filtering pileup file with samtools for SomaticSniper
somaticsniper samtools snp pileup written 2.4 years ago by TriS3.2k • updated 15 months ago by guangxujin0
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Pileup format parsing difficulty
samtools pileup written 16 months ago by maheetha.b30 • updated 16 months ago by John Marshall1.2k
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Samtools 1.3 mpileup result < >
next-gen samtools rna-seq pileup sequencing written 2.0 years ago by yanweng20 • updated 2.0 years ago by alebuenosm20
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(samtools) Filtering and interpreting >100 QUAL scores
vcf phred-scaled qual samtools pileup written 2.1 years ago by umn_bist270 • updated 2.1 years ago by Brice Sarver2.4k
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understanding pysam pileup()
pysam pileup written 2.2 years ago by geek_y8.2k
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How To Pile Up Multiple Bed Files Into 1 File
bed intersect sam bam pileup written 5.8 years ago by Hanfei Sun60 • updated 2.3 years ago by Biostar ♦♦ 20
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Masked Or Unmasked Dna Reference For Sam2Vcf.Pl
vcf samtools pileup written 6.8 years ago by Pi510 • updated 2.4 years ago by Biostar ♦♦ 20
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meaning of new symbols in samtools mpileup format?
samtools snp pileup htslib written 3.5 years ago by Dejian1.2k • updated 3.5 years ago by Devon Ryan76k
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Samtools Pileup Of Millions Of Reads From A Single Amplicon
samtools pileup sequencing written 4.0 years ago by Sebastian10 • updated 4.0 years ago by Christian2.6k
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Pileup To Vcf Format
vcf pileup written 6.9 years ago by Pri20 • updated 4.3 years ago by Biostar ♦♦ 20
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How To Generate A Consensus Sequence On The Galaxy Platform
galaxy pileup written 4.6 years ago by thelittledoctor0 • updated 4.3 years ago by Biostar ♦♦ 20
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Sra-Pileup Question
pileup written 4.3 years ago by Sergei Lebedev30 • updated 4.3 years ago by Matt Shirley8.2k
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Imitate Pileup Format
samtools mpileup pileup written 4.5 years ago by Lee Katz2.8k • updated 4.5 years ago by polarise370
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