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<prev • 152 results • page 1 of 6 • next >
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PacBio end-to-end pipeline advise
isoseq alignment pipeline pacbio rna-seq written 15 days ago by entropy • 30
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Scale cores down when close to memory limit snakemake/nextflow
pipeline cores memory written 7 weeks ago by gb • 1.2k
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120
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Tool: Compi: Application Framework for Portable Computational Pipelines
workflow management system pipeline docker tool written 7 weeks ago by Hugo • 180
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Small demo bioinformatics workflows which don't require reference data?
bioinformatics workflow pipeline written 12 weeks ago by steve • 2.4k • updated 8 weeks ago by Biostar ♦♦ 20
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News: Nextflow Training Course
workflow pipeline news nextflow written 9 weeks ago by carlopecoraro2 • 1.3k • updated 9 weeks ago by ATpoint ♦ 26k
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Running blast command line inside python script
python pipeline blast written 3 months ago by flogin • 150 • updated 3 months ago by Mensur Dlakic • 2.5k
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Will pipeline designed for detecting selection in diploid organisms work on my haploid data?
vcf pipeline diploid haploid positive selection written 3 months ago by gcooper1245 • 10
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small wheat samples fastq or fatq.gz for testing pipeline
wheat pipeline test written 4 months ago by jorge.perezparedes • 0 • updated 4 months ago by MatthewP • 330
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Tissue Specificity R-package
r package publication tissue specificity pipeline written 21 months ago by YaGalbi • 1.4k • updated 4 months ago by Biostar ♦♦ 20
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How to get my tool on Homebrew ?
tools pipeline tool homebrew written 5 months ago by Elephantdumbo • 20 • updated 5 months ago by Philipp Bayer ♦ 6.5k
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News: Interested in learning more about GWAS? Course in Canada this September
gwas news pipeline written 5 months ago by carlopecoraro2 • 1.3k
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Perform one basecommand fot multiple files and get output for each file in CWL
cwl workflow pipeline written 6 months ago by mariafirulevabio • 40 • updated 6 months ago by Tom • 520
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ion torrent pipeline
ion-torrent pipeline snp nextflow variants written 6 months ago by acebolladaso.iacs • 10
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How about my parallel bwa+gatk pipeline?
gatk ngs parallel pipeline written 2.1 years ago by bluemonster0808 • 40 • updated 6 months ago by Charles Warden ♦ 7.5k
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News: The BioCompute Object App-a-thon is now live!
bioinformatics news app-a-thon pipeline precisionfda written 7 months ago by stephens_sarah • 140
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News: The BioCompute Object App-a-thon starts on May 14!
standards bioinformatic computation pipeline news written 7 months ago by stephens_sarah • 140
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Snakemake report error:Missing input files for rulle all
pipeline snakemake rna-seq written 7 months ago by harrypotterandsbt • 60
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Tool: AllMine, a flexible pipeline for allele mining
wgs pipeline snp rna-seq tool written 7 months ago by thomasbersez • 50
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Job: Bioinformatician / Data Manager Position Open - Mount Sinai, New York
chip-seq pipeline atac-seq rna-seq job written 8 months ago by jaroslav.bendl • 10
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WDL + cromwell and remote server
cromwel sshfs pipeline wdl written 8 months ago by c.clarido • 50
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7 follow
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What Are Some Sanity Checks That Should Be Performed On Ngs Data?
quality next-gen pipeline sequencing written 9.0 years ago by Jeremy Leipzig ♦ 18k • updated 9 months ago by Biostar ♦♦ 20
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How to parallelize a rule in Snakemake ?
ngs pipeline snakemake rna-seq written 9 months ago by darbinator • 190
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TCGA DNA methylation data pipeline
dna methylation tcga pipeline written 10 months ago by yuabrahamliu • 40 • updated 10 months ago by Charles Warden ♦ 7.5k
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News: SNAKEMAKE course in Berlin. Last 3 places
python news pipeline written 11 months ago by carlopecoraro2 • 1.3k
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How to run Snakemake pipeline from .py file instead of .smk file.
python pipeline snakemake written 11 months ago by Artem Kiselev • 20
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6 follow
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RNA-Seq Differential Expression Bash Scripting Error
pipeline samtools bash scripting rna-seq hisat2 written 11 months ago by timothyfisher101 • 0 • updated 11 months ago by ATpoint ♦ 26k
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How to find true mutations in tumor by removing the background from matched sample?
normalization exome-seq R snp pipeline written 11 months ago by dodausp • 120 • updated 11 months ago by bernatgel • 2.3k
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Bash vs WDL for running GATK
gatk cromwell pipeline linux wdl written 12 months ago by Mehulsharma.253 • 10 • updated 12 months ago by vdauwera • 960
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8 follow
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workflow management system : WDL, CWL, Ruffus, SnakeMake, etc
pipeline language written 13 months ago by Bogdan • 890 • updated 13 months ago by WouterDeCoster ♦ 42k
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SplitsTree command line mode
phylogeny command line splitstree pipeline network written 13 months ago by Macspider • 3.0k
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