Showing: plinkreset
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8
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1
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Convert VCFf file to plink ped/map format while filtering the SNPs
plink map ped vcftools written 4.1 years ago by roll240 • updated 23 hours ago by zx87545.7k
2
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2
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614
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2
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0
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0
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119
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How plink calculates meta-analysis
gwama metal meta-analysis plink written 20 days ago by johnS0 • updated 1 day ago by Biostar ♦♦ 20
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Convert Phase Output To Plink
plink written 5.2 years ago by 71480 • updated 3 days ago by Biostar ♦♦ 20
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86
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2
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76
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Position error using write.plink
R snp plink snpstats write.plink written 6 days ago by ida.larsson20 • updated 6 days ago by zx87545.7k
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49
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55
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73
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57
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67
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0
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101
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3
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1
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180
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1
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How to convert bgen data files to PLINK format
software bgen plink written 6 weeks ago by bha60 • updated 15 days ago by Biostar ♦♦ 20
18
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5
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5.1k
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8 follow
5
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Phased Data In Plink
plink genotyping written 7.6 years ago by Pierre480 • updated 20 days ago by Shicheng Guo7.1k
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25 follow
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83
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0
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1
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99
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1
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Plink genotype * sex
genome plink snp written 26 days ago by rmretama0 • updated 26 days ago by chrchang5234.2k
5
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1
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152
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1
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GWAS in Plink - phenotype file format
gwas snps plink phenotype written 4 weeks ago by SGMS50 • updated 4 weeks ago by zx87545.7k
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0
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161
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How to validate SNP if NCBI Genome remapping service as failed
gwas plink snp R written 8 weeks ago by Leonida Monaco20 • updated 4 weeks ago by Biostar ♦♦ 20
0
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1
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176
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1
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Plink: Understanding LD Clumping vs Pruning
clumping eqtl pruning ld plink written 5 weeks ago by Werewolf10 • updated 4 weeks ago by Kevin Blighe32k
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0
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119
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Prune SNPs in LD with a list of SNPs
snp plink ld written 5 weeks ago by aritra9020
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1
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2.0k
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1
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Forcing A1/A2 alleles in PLINK in a VCF phased file
vcf plink snp written 14 months ago by GabrielMontenegro430 • updated 5 weeks ago by diercles.cardoso0
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102
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How can I allow to hetro and missing genotype in ROH detection?
missing roh plink hetro written 6 weeks ago by mary190 • updated 6 weeks ago by zx87545.7k
1
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0
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158
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0
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Error: Line 2 of .ped file has more tokens than expected.
snps plink written 6 weeks ago by sonia.olaechea20 • updated 6 weeks ago by zx87545.7k
2
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1
answer
113
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1
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Plink command to find tag SNP for DRB1*01, DRB1*04, and DRB1*10
plink written 7 weeks ago by Shicheng Guo7.1k • updated 7 weeks ago by zx87545.7k
4
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1
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1.0k
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1
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Change plink file for logistic in R
R plink snp logistic written 2.8 years ago by C-man10 • updated 8 weeks ago by zx87545.7k
4
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0
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371
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0
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How to convert txt or csv files into ped files?
R plink ped python written 4 months ago by sjunlee890 • updated 8 weeks ago by zx87545.7k
2
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1
answer
843
views
1
answer
P-value problem in Plink
p-value plink logistic written 2.7 years ago by C-man10 • updated 8 weeks ago by RamRS19k
2
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1
answer
165
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1
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Plink: Proper file format for linkage disequilibirum
plink written 8 weeks ago by Werewolf10 • updated 8 weeks ago by RamRS19k
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0
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890
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0
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Plink - logistic regression - several binary outcomes
plink logistic written 2.8 years ago by C-man10 • updated 8 weeks ago by RamRS19k
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