Showing: plinkreset
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34
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29 follow
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TCGA SNP to plink
maf tcga plink written 10 hours ago by archie50
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78
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5 follow
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Split plink files by a number of SNPs
gwas plink snp written 1 day ago by kakukeshi20 • updated 1 day ago by WouterDeCoster30k
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1
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130
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1
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recode SNPs ATGC illumina
plink snp written 3 days ago by ami23.sarr0 • updated 2 days ago by Kevin Blighe24k
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95
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1
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92
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How to get TCGA SNP in vcf and process in PLINK
vcf tcga plink written 5 days ago by archie50 • updated 5 days ago by pbpanigrahi170
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7 follow
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4
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Convert .gprobs files to PLINK format
genome gprobs plink snp dbgap written 6 days ago by lauretomas10 • updated 6 days ago by chrchang5233.6k
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78
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97
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79
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how to make bootstrapped tree using PLINK files?
tree snp plink written 12 days ago by RS20 • updated 12 days ago by Kevin Blighe24k
3
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109
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Fst between the combination of populations (pairwise)
pairwise fst plink written 4 weeks ago by cmcouto.silva30 • updated 12 days ago by Biostar ♦♦ 20
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105
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135
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Full list of KING options and paramenters
king relatedness kinship plink ibd written 9 weeks ago by gaelgarcia05180 • updated 19 days ago by Wei-Min Chen0
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3
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3
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fcGENE conversion error: Plink dosage to bed/bim/fam
dosage fcgene plink written 23 months ago by aldoc10 • updated 19 days ago by Brady0
1
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87
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1
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choice of snps for pca analysis
indep-pairwise pca plink population genetics written 25 days ago by wrab42510 • updated 25 days ago by Kevin Blighe24k
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check relatedness of individuals
R next-gen genetics plink snp written 7 weeks ago by bha60 • updated 26 days ago by Biostar ♦♦ 20
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67
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Input for VariantsToBinaryPed
gatk plink written 28 days ago by archie50 • updated 28 days ago by zx87544.6k
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85
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4
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219
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2
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164
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How to remove duplicate SNPs from plink ped,vcf?
plink snp written 5 weeks ago by Tania120 • updated 5 weeks ago by Kevin Blighe24k
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288
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PLINK heterozygosity - Negative F statistic?
gwas plink heterozygosity written 3 months ago by Caragh 40 • updated 5 weeks ago by Biostar ♦♦ 20
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90
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0
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104
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How to Ranking SNPs
R plink snp written 6 weeks ago by bha60
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114
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Runs of homozygosity calculation
roh bcftools plink written 6 weeks ago by BAGeno70 • updated 6 weeks ago by Wietje150
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124
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1
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0
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101
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3
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142
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Triallelic variant - GWAS
gene plink snp written 7 weeks ago by khn20 • updated 7 weeks ago by chrchang5233.6k
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