Showing: plinkreset
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Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format
vcf 1000 genomes tutorial pca plink written 4 months ago by Kevin Blighe11k • updated 21 hours ago by DataFanatic70
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Beagle 4.1 error : Possible data conversion issue
vcf plink snp beagle written 2.2 years ago by aritra9020 • updated 6 days ago by scottf1740
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Plink 1.9 --ld and --r2/r
snp plink linkage disrqulibrium written 22 months ago by Kousik0 • updated 6 days ago by Biostar ♦♦ 20
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plink linear regression P values
plink written 12 days ago by AQ720 • updated 12 days ago by chrchang5232.9k
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plink linear regression
plink written 14 days ago by AQ720
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From Impute2 to PLINK: when to merge chromosome files?
impute2 imputation plink gwas written 15 days ago by whit180 • updated 14 days ago by Wietje20
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How can I get the list of genes between two SNPs?
gwas open plink snp homozygosity mapping written 2.0 years ago by hamidhamzeiy0 • updated 16 days ago by Biostar ♦♦ 20
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Using snpStats to read a pedfile, object 'm' not found
R plink ped written 14 months ago by nadrianam10 • updated 16 days ago by Ram13k
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Recoding plink file from 12 to 01
file plink2chromopaiter.pl conversion plink written 20 days ago by dirranrak10 • updated 19 days ago by Ram13k
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How to merge two files genotype and ped In Linux? I sample files as follows.
plink linux written 13 months ago by mm0 • updated 21 days ago by mittu1602130
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Recode to VCF with -a2-allele flag in PLINK
vcf plink recode written 3 months ago by emyli0 • updated 4 weeks ago by Biostar ♦♦ 20
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Plotting linkage equilibrium results
plotting ld heatmap linkage disequilibrium plink written 4 weeks ago by tarek.mohamed130 • updated 4 weeks ago by Hussain Ather680
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Window-size in PLINK's indep-pairwise LD pruning
genome plink snp pruning written 5 weeks ago by solion0 • updated 5 weeks ago by Kevin Blighe11k
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Plink: Quick Way To Combine Two Datasets Using Only Common Markers
plink written 5.2 years ago by pufferfish70 • updated 5 weeks ago by Leonida Monaco10
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PLINK .bim file shows chromosome 0 on Affymetrix chip
snp plink affymetrix written 2.3 years ago by philipovic10 • updated 7 weeks ago by Kevin Blighe11k
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Plink. How to create small .ped file from big .ped file?
plink written 7 weeks ago by Mr Locuace30 • updated 7 weeks ago by chrchang5232.9k
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Recode vcf with specified reference allele
vcf vcftools plink flip reference allele written 9 weeks ago by wangdavid7580 • updated 9 weeks ago by Pierre Lindenbaum103k
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