Showing: plinkreset
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Input for VariantsToBinaryPed
gatk plink written 1 day ago by archie50 • updated 1 day ago by zx87544.5k
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How to remove duplicate SNPs from plink ped,vcf?
plink snp written 12 days ago by Tania120 • updated 12 days ago by Kevin Blighe21k
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PLINK heterozygosity - Negative F statistic?
gwas plink heterozygosity written 10 weeks ago by Caragh 40 • updated 12 days ago by Biostar ♦♦ 20
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How to Ranking SNPs
R plink snp written 15 days ago by bha50
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85
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Runs of homozygosity calculation
roh bcftools plink written 20 days ago by BAGeno70 • updated 20 days ago by Wietje150
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Triallelic variant - GWAS
gene plink snp written 26 days ago by khn20 • updated 25 days ago by chrchang5233.5k
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Can we skip --mind?
genome gene plink snp written 28 days ago by khn20 • updated 27 days ago by chrchang5233.5k
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Create linkage disequilibrium file
locusexplorer snp linkage disequilibrium plink ld written 5 weeks ago by Dhana60 • updated 4 weeks ago by zx87544.5k
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Pormat ped and map file for PLINK with bacteria
plink written 6 weeks ago by Seb_Lopez10 • updated 6 weeks ago by zx87544.5k
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Help getting Plink files into Treemix
plink snp written 2.1 years ago by devenvyas480 • updated 6 weeks ago by Biostar ♦♦ 20
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Read MAP and PED files in PLINK
gwas plink written 6 weeks ago by ft8215250 • updated 6 weeks ago by Wietje150
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Pruning a dense SNP dataset without losing too much LD
plink written 3.2 years ago by yorgos.athanasiadis30 • updated 6 weeks ago by chrchang5233.5k
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PLINK format to EIGENSTRAT format
plink eigenstrat written 3.7 years ago by bsmith03046590 • updated 6 weeks ago by Biostar ♦♦ 20
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