Showing: plinkreset
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PLINK error locus has more than 2 alleles
gwas snps plink written 4.5 years ago by biogirl170 • updated 5 days ago by Runen0
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PLINK : Error: --tdt requires a case/control phenotype.
plink written 8 days ago by bsmith030465150 • updated 8 days ago by chrchang5235.5k
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Calculate disease risk based on the genoytype of some SNPs?
prsice gwas prs plink snp written 4 weeks ago by Miguel0 • updated 17 days ago by Biostar ♦♦ 20
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Duplicate Variant IDs Issue
gwas plink snp written 19 days ago by goodmb0 • updated 19 days ago by chrchang5235.5k
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Plink 1.9 "File read failure" error when merging with --bmerge
gwas plink error written 6 months ago by svendula20 • updated 20 days ago by Juan Manuel Berros80
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How does plink compute n_geno ("number of potentially valid call(s)")?
plink genotyping written 5 weeks ago by kynnjo20 • updated 5 weeks ago by chrchang5235.5k
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Odds ratio confidence interval in meta-analysis
gwas plink meta-analysis written 20 months ago by alessandrotestori7330 • updated 5 weeks ago by emma.jones560
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How to interpret a PCA
pca plink written 6 weeks ago by frd.graeme10
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Convert vcf phased data to plink
vcf phased-haplotype plink convert written 7 weeks ago by Nandini820 • updated 7 weeks ago by Gabriel R.2.6k
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Convert Plink .Ped File To Pbat .Ped File
plink written 5.7 years ago by huong.la0 • updated 7 weeks ago by Biostar ♦♦ 20
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Breaking PLINK.bim .bed .fam files into chromosomes
plink snp written 7 weeks ago by safiradrak10 • updated 7 weeks ago by zx87547.9k
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arlequin SFS output
arlequin fastsimcoal plink pgdspider sfs written 8 weeks ago by decaraa0 • updated 8 weeks ago by RamRS23k
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PLINK - error in --make-bed
plink written 8 weeks ago by bsmith030465150 • updated 8 weeks ago by chrchang5235.5k
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Why do I have more than 5000 variants when I used a 5K snp array?
vcf alignment variant plink snp written 8 weeks ago by rgooley0 • updated 8 weeks ago by genomax70k
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How do I merge plink files with different SNPs?
genome vcf plink snp written 8 weeks ago by amber10 • updated 8 weeks ago by zx87547.9k
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use `plink --rel-cutoff` to remove related samples
plink written 8 weeks ago by blueskypie40 • updated 8 weeks ago by chrchang5235.5k
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Strands are reversed
plink beagle written 8 weeks ago by richyanicky10 • updated 8 weeks ago by genomax70k
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rename samples in a vcf or plink file
vcf plink snp written 9 weeks ago by jaafari.omid50 • updated 9 weeks ago by WouterDeCoster40k
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ANGSD tped output errors
next-gen angsd snp plink written 3 months ago by MM__0 • updated 9 weeks ago by giovanniforcina840
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