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<prev • 69 results • page 1 of 3 • next >
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How to get derived allele count for a list of SNPs
vcf population derived allele written 2 days ago by seta • 1.1k
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Structure Software : Error in assigning memory (not enough space?)
structurre population structure software strauto written 26 days ago by BioRyder • 160
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196
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Fst calculation between my own population and 1000 genome populations
population 1000 genome fst written 7 weeks ago by seta • 1.1k • updated 6 weeks ago by cetin.m • 20
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calculating allele frequency difference or Fst value ?
allele frequency population fst written 3 months ago by seta • 1.1k • updated 10 weeks ago by paolo002 • 130
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Plotting SNPs with different allele frequency between population
plotting population snp written 11 weeks ago by seta • 1.1k • updated 11 weeks ago by Kevin Blighe ♦ 37k
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POPGENOME: fasta input
genome R alignment sequence population written 3 months ago by gentiaco • 10
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Find clones in a population using a vcf file.
clones vcf population snp gbs written 3 months ago by felipe-bita • 0
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Allele frequency comparison by Fisher's exact test
allele frequency population fisher's exact test written 3 months ago by seta • 1.1k
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Gwas Peak In Only One Population, Why?
gwas population association written 7.7 years ago by Sally • 30 • updated 5 months ago by Biostar ♦♦ 20
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6 follow
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How To Get Snps Matrix For Population Genetic Ananlysis From Snps Variant Files
matrix population genetics snp written 8.2 years ago by Jianfengmao • 310 • updated 5 months ago by RamRS ♦ 20k
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Estimating Effective Population Size (Ne) From Rnaseq Data
population next-gen sequencing written 7.6 years ago by Yannick Wurm • 2.3k • updated 6 months ago by Ben Sutherland • 10
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451
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PCA implementation in plink
population pca plink written 6 months ago by prasundutta87 • 300 • updated 6 months ago by chrchang523 ♦ 4.6k
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f3 statistics tutorial or ppt
popul population genetics written 6 months ago by Genotepes • 940
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Best program for population structure analyses of whole genome SNP data of many individuals
genome software population sequencing written 7 months ago by rc16955 • 50
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Plot linkage disequilibrium along chromosome
linkage R next-gen population chromosome written 11 months ago by Roy • 10 • updated 9 months ago by Biostar ♦♦ 20
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Phasing without a reference panel
hapmap population genotype phasing written 12 months ago by chadapohn.chaosrikul • 0 • updated 12 months ago by Wietje • 180
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2
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ExAC includes WES of phenotyped population
population exac snp written 13 months ago by CY • 270 • updated 13 months ago by Chris Miller ♦ 20k
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Finding SNPs in population data: help with pipeline
genome population snp pileup written 21 months ago by Alex • 0 • updated 14 months ago by Pierre Lindenbaum ♦ 116k
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6 follow
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Why 4Ne Rather Than 2Ne?
population written 6.9 years ago by Lds • 380 • updated 18 months ago by Biostar ♦♦ 20
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Looking for Population Genetics Simulation Software
genome simulation population written 2.4 years ago by xescape • 20 • updated 21 months ago by Biostar ♦♦ 20
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6 follow
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imputation only choose one population as reference panel
shapeit impute2 population gwas written 24 months ago by Peter Chung • 70 • updated 21 months ago by ShirleyDai • 40
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multi vcf population genomics analysis
vcf population written 2.1 years ago by guillaume.rbt • 530
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Population statistics VCF file format for Cartagenia?
vcf population format statistics written 2.4 years ago by hhj • 0 • updated 2.4 years ago by geek_y ♦ 9.1k
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772
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Inferring Local Ethnicity of the Reference Genome
population reference ethnicity inferrence written 2.4 years ago by anovak • 40
3
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1
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714
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1
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Population stratification in targeted sequencing?
stratification population exac sequencing written 2.5 years ago by peris • 110 • updated 2.5 years ago by Floris Brenk • 870
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Simulating Bacterial Population
reads population simulate bacterial written 2.6 years ago by Sama • 50 • updated 2.6 years ago by Brian Bushnell ♦ 16k
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How does breed-specific permutation account for population stratification?
permutation stratification population snp written 2.7 years ago by Tom • 20
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detecting SNP allele and genotype frequencies from 1000 genomes at ensembl
population frequency allele mysql genotype written 2.8 years ago by Viktor Bojovic • 0
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2
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Admixture Program
population genetics written 6.7 years ago by Motor Genetic • 100 • updated 2.9 years ago by Biostar ♦♦ 20
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Detecting fine population structure such as might confound a rare variant association study
substructure rare variant population gwas confound written 3.4 years ago by Vincent Laufer • 1.0k • updated 3.0 years ago by Biostar ♦♦ 20
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