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How to run PSSPred on multple sequences

psspred sequence peptide written 12 months ago by Tom • 20 • updated 12 months ago by Pierre Lindenbaum ♦ 119k

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877

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PSSPred Alignment Alignment

i-tasser psspred alignment written 4.2 years ago by virpatel3 • 20

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C: Calling Single-Barcode Samples from Mixed Runs as Dual-Barcode Samples | Possibl by Charles Warden ♦ 6.6k
I also modified the title, which hopefully frames the question about the 3 possible run QC flags ...
C: How to find pathogenicity of a single missense variant ? by bioinforesearchquestions • 210
Thanks Benn for the link for aa sequence. I took the amino acid seq from NCBI protein database an...
C: mash configure error --with-gsl can not find gsl by oussriradnane • 0
thank you michael.ante
A: ERROR IN Mothur tool by haddadfatiha62 • 0
NO, i didn't have any problem before this command , I have the same results like tutorial but wh...
C: ERROR IN Mothur tool by WouterDeCoster ♦ 38k
`M00967_43_000000000-A3JHG_1_1114_15978_19655 is not in your count table. Please correct.` Surel...
C: ERROR IN Mothur tool by Kevin Blighe ♦ 41k
`Segmentation fault (core dumped)` generally relates to an issue with memory / RAM
C: ERROR IN Mothur tool by genomax ♦ 65k
There was no error/warnings before you encountered this one? Did all outputs match what is shown ...
C: To compare two genes from different species from a .gbff by jrj.healey ♦ 12k
You will need to compare the sequences if you really care about them being *identical*. If you on...
A: How to find pathogenicity of a single missense variant ? by Kevin Blighe ♦ 41k
Two previous answers with more tools: - https://www.biostars.org/p/354779/#354790 - https://ww...
C: Publicly available brain tissue (any part) Histone (H3K27me3 and H3K4me3) ChIP-s by EagleEye ♦ 6.2k
I will have a look :)
C: Publicly available brain tissue (any part) Histone (H3K27me3 and H3K4me3) ChIP-s by genomax ♦ 65k
There was a much larger list that you may need to look through. I only copied a few entries.
C: Publicly available brain tissue (any part) Histone (H3K27me3 and H3K4me3) ChIP-s by EagleEye ♦ 6.2k
Thanks for the information. Looks like SRR2172598 and SRR2172599 are not publicly available (they...

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