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How to run PSSPred on multple sequences

psspred sequence peptide written 9 months ago by Tom • 20 • updated 9 months ago by Pierre Lindenbaum ♦ 116k

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PSSPred Alignment Alignment

i-tasser psspred alignment written 3.9 years ago by virpatel3 • 20

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Recent Replies

C: Did anyone manage to successfully run HLAScan and get results? by Kevin Blighe ♦ 35k
Did you try to contact the developer of HLAscan?
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You're welcome. Yes, most likely there is a way. What are the columns in the output of Sleuth?
C: Iterative trimming using bowtie by ancient_learner • 610
Yeah. [GSE74912][1] [1]: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE74912
C: Iterative trimming using bowtie by ATpoint ♦ 12k
Still that is reasonable. Still, that mapping rate is poor and unusual for a good ATAC-seq librar...
C: Showing samples in or out of a range central tendencies by russhh • 4.1k
Sorry, I wasn't referring to you F. It was the advice from Santosh that I was questioning
C: BagFoot TF foot printing by Hughie • 10
Hi Ricardo, I have tried 3/4 days on this package and I'm now troubling at the final run() step, ...
C: Combining Normals in multi-region genome sequencing by nicholasyounger38 • 10
Thanks very much, I have asked around the bioinformaticians here also and joint genotyping seems ...
C: Iterative trimming using bowtie by ancient_learner • 610
Yes. Thought I would grep them out after alignment.
C: Iterative trimming using bowtie by ATpoint ♦ 12k
Does your reference genome contain chrM?
C: R for loop by jordi.planells • 10
Basically, what i want to do is to add column names to my files, in one piece of code. For a sing...
C: Fields with biggest demand for bioinformatics? by jrj.healey ♦ 10.0k
Well thats easy then :P ### Anything with AI or ML in the title
A: Percent abundance of two separate species in transcriptome data by kristoffer.vittingseerup • 1.2k
Unless you have a "pure" refrence sample this is not feasible (you can combine two expression pro...

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