Showing: pysamreset
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output differents value between samtools depth and pysam
python pysam written 9 weeks ago by electronsource7510 • updated 8 weeks ago by Devon Ryan81k
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Pysam fetch for records not exists in VCF files
pysam fetch written 21 months ago by always_learning910 • updated 10 weeks ago by Vasisht150
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Pysam read reference positions and sequence do not match
samtools pysam pileup tview written 9 months ago by rlorigro0 • updated 8 months ago by Biostar ♦♦ 20
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Error in pysam: trying to read BAM file using CYTHON
next-gen alignment pysam written 9 months ago by ammarsabir1550 • updated 9 months ago by Devon Ryan81k
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pysam not plotting exact values for coverage
alignment pysam coverage written 10 months ago by ammarsabir1550 • updated 10 months ago by Devon Ryan81k
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Error during htseq-count
htseq-count star pysam written 10 months ago by baffiak190210
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pysam: filtering reads based on flag
python samtools pysam hts written 3.0 years ago by QVINTVS_FABIVS_MAXIMVS2.1k • updated 12 months ago by Biostar ♦♦ 20
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Extract R2F1 reads
samtools pysam structural variation written 12 months ago by IP360
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pysam truncated file error
python samtools pysam written 13 months ago by pupatel0
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Pysam changes bam format when printing
pysam written 13 months ago by grant.hovhannisyan900 • updated 13 months ago by i.sudbery2.4k
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Tool: pybam - 100% python BAM reader
htspython python bam pysam tool written 2.3 years ago by John12k
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How to filter/view reads mapped to multiple locations using samtools or pysam
python samtools pysam written 16 months ago by AlchemistMoz20 • updated 16 months ago by Tom_L270
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Necessary to close pysam.AlignmentFile?
python bam pysam written 17 months ago by AlchemistMoz20 • updated 17 months ago by Devon Ryan81k
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Pysam Fetching specified regions
python pysam written 17 months ago by AlchemistMoz20
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Filter low quality reads in bam files
python next-gen pysam written 19 months ago by ammarsabir1550 • updated 19 months ago by Brian Bushnell15k
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