Showing: pysamreset
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3
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unmapped reads with pysam
pysam written 17 days ago by grant.hovhannisyan1.4k
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3
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pysam difference between template_length and reference_length
genome next-gen pysam written 3 months ago by Medhat8.1k • updated 3 months ago by Devon Ryan88k
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193
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pysam: How do I type an AlignedSegment in Cython?
cython pysam written 3 months ago by Click downvote650 • updated 3 months ago by Biostar ♦♦ 20
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203
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How to ignore truncation error with PySam?
python sam alignment mapping pysam written 4 months ago by O.rka70 • updated 3 months ago by Biostar ♦♦ 20
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215
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appropriate way to use pysam.depth
python pysam written 4 months ago by Medhat8.1k
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Problem iterating through BAM file using pysam
python sam bam forloop pysam written 3.0 years ago by c9r1y0 • updated 5 months ago by RamRS20k
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cannot import pysam. Module has no attribute error
samtools api python pysam written 3.6 years ago by QVINTVS_FABIVS_MAXIMVS2.2k • updated 5 months ago by RamRS20k
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pysam truncated file error
python samtools pysam written 19 months ago by pupatel0 • updated 5 months ago by Biostar ♦♦ 20
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416
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4
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456
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5 follow
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output differents value between samtools depth and pysam
python pysam written 9 months ago by electronsource7510 • updated 9 months ago by Devon Ryan88k
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7 follow
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python script error: ImportError: No module named pysam
.py overlapsignature pysam pythonscript written 9 months ago by jaqx00840 • updated 9 months ago by Carlos Borroto1.8k
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663
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2
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Pysam fetch for records not exists in VCF files
pysam fetch written 2.3 years ago by always_learning950 • updated 9 months ago by Vasisht150
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Pysam read reference positions and sequence do not match
samtools pysam pileup tview written 16 months ago by rlorigro0 • updated 15 months ago by Biostar ♦♦ 20
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0
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Error in pysam: trying to read BAM file using CYTHON
next-gen alignment pysam written 16 months ago by ammarsabir1550 • updated 16 months ago by Devon Ryan88k
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pysam not plotting exact values for coverage
alignment pysam coverage written 17 months ago by ammarsabir1550 • updated 17 months ago by Devon Ryan88k
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Error during htseq-count
htseq-count star pysam written 17 months ago by baffiak190210
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pysam: filtering reads based on flag
python samtools pysam hts written 3.6 years ago by QVINTVS_FABIVS_MAXIMVS2.2k • updated 19 months ago by Biostar ♦♦ 20
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532
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Extract R2F1 reads
samtools pysam structural variation written 19 months ago by IP530
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