Showing: pysamreset
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Pysam read reference positions and sequence do not match
samtools pysam pileup tview written 6 months ago by rlorigro0 • updated 5 months ago by Biostar ♦♦ 20
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Error in pysam: trying to read BAM file using CYTHON
next-gen alignment pysam written 6 months ago by ammarsabir1550 • updated 6 months ago by Devon Ryan78k
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pysam not plotting exact values for coverage
alignment pysam coverage written 7 months ago by ammarsabir1550 • updated 7 months ago by Devon Ryan78k
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Error during htseq-count
htseq-count star pysam written 7 months ago by baffiak190210
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pysam: filtering reads based on flag
python samtools pysam hts written 2.8 years ago by QVINTVS_FABIVS_MAXIMVS2.0k • updated 9 months ago by Biostar ♦♦ 20
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335
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Extract R2F1 reads
samtools pysam structural variation written 9 months ago by IP350
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555
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pysam truncated file error
python samtools pysam written 9 months ago by pupatel0
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Pysam changes bam format when printing
pysam written 10 months ago by grant.hovhannisyan730 • updated 10 months ago by i.sudbery1.9k
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Tool: pybam - 100% python BAM reader
htspython python bam pysam tool written 2.0 years ago by John12k
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How to filter/view reads mapped to multiple locations using samtools or pysam
python samtools pysam written 13 months ago by AlchemistMoz20 • updated 13 months ago by Tom_L260
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Necessary to close pysam.AlignmentFile?
python bam pysam written 14 months ago by AlchemistMoz20 • updated 14 months ago by Devon Ryan78k
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Pysam Fetching specified regions
python pysam written 14 months ago by AlchemistMoz20
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Filter low quality reads in bam files
python next-gen pysam written 16 months ago by ammarsabir1550 • updated 16 months ago by Brian Bushnell15k
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Error Filtering BAM file based on mapping qualities in python's pysam
next-gen alignment pysam written 16 months ago by ammarsabir1550 • updated 16 months ago by John12k
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For loop that continues finding matches in a file
python loop fastq pysam written 16 months ago by yarmda0 • updated 16 months ago by WouterDeCoster27k
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pysam fetch with partial reference name
pysam python fetch bamfile substring written 17 months ago by yarmda0 • updated 17 months ago by Devon Ryan78k
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Pysam under pypy?
python pysam pypy written 3.2 years ago by John12k • updated 20 months ago by Eric T.2.1k
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914
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