Showing: qcreset
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RSeQC installation error
python ngs qc rseqc written 15 hours ago by bioinfo890 • updated 5 hours ago by h.mon9.0k
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209
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6 follow
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should I merge fastq files for different lanes before do QC?
merge qc rna-seq written 19 days ago by Lila M 370 • updated 19 days ago by i.sudbery1.6k
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199
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Dereplication step leads to increased file size
wgs metagenomics paired end qc written 11 weeks ago by aditijangid660 • updated 23 days ago by Ram12k
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307
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125
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Error while installing RSeQC
rnaseq qc rseqc written 26 days ago by KVC_bioinfo110 • updated 26 days ago by WouterDeCoster22k
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5 follow
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Post alignment QC of RNA-seq data
qc fastqc written 28 days ago by KVC_bioinfo110 • updated 28 days ago by Brian Bushnell14k
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FastQC not making html output report.
adapter trim ngs qc rna-seq fastqc written 17 months ago by Shahzad10 • updated 4 weeks ago by Philipp Bayer4.8k
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279
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How to plot VCF missingness per sample (.imiss) and per variant (.lmiss) in python?
vcf qc plink vcftools written 7 months ago by William3.9k • updated 11 weeks ago by Biostar ♦♦ 20
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199
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273
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5 follow
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What are the available methods to detect cross-sample contamination of NGS data?
ngs qc written 3 months ago by MAPK1.0k • updated 3 months ago by Brian Bushnell14k
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trim_galore output: val_1 and val_2 files??
qc rna-seq written 4 months ago by radlinsky0 • updated 4 months ago by h.fushimi.x68910
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Cleaning RNA-Seq data from rRNA
rrna cleaning qc rna-seq written 18 months ago by debitboro70 • updated 4 months ago by h.mon9.0k
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7 follow
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0
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178
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vcftools QC process
vcf qc vcftools sequencing written 6 months ago by chengyi310000
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198
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4
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520
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RNA-SeQC does not calculate information about "Strand Specificity"
qc rna-seq written 9 months ago by Lina F110 • updated 9 months ago by Charles Warden4.9k
2
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461
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1
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Yeast GTF file needed for RNA-SeQC run
gtf qc yeast rna-seq rna-seqc written 9 months ago by Lina F110 • updated 9 months ago by apa@stowers320
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RNA-seq quality control
next-gen alignment qc star rna-seq written 11 months ago by Ron600 • updated 11 months ago by Devon Ryan71k
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BLAST pipeline operations
assembly qc written 13 months ago by skbrimer390
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Making Linkage Disequilibrium blocks from SNPs position for NCBI Build 38
gwas qc ld population study written 15 months ago by Bahar40 • updated 14 months ago by chrchang5232.7k
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Is Paired End analysis possible with FASTQC?
paired-end dna-seq qc fastqc written 17 months ago by chefarov80 • updated 15 months ago by Biostar ♦♦ 20
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478
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24
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24 follow
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Which software do you use for RNA-seq data quality control?
qc quality-control rna-seq written 3.4 years ago by Christian2.6k • updated 16 months ago by Michael Dondrup43k
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reduced quality in a paired-end R2 reads
qc quality chip-seq rna-seq fastqc written 16 months ago by Assa Yeroslaviz1.1k • updated 16 months ago by Brian Bushnell14k
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