Showing: qcreset
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Quality control of gene expression data
qc written 8 weeks ago by landscape95130 • updated 8 weeks ago by Kevin Blighe19k
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How 2-channel sequencing chemistry (Next-Seq) distinguish "G" and 'no signal'
next-seq qc written 9 weeks ago by CY130 • updated 9 weeks ago by Devon Ryan79k
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Is Paired End analysis possible with FASTQC?
paired-end dna-seq qc fastqc written 2.0 years ago by chefarov80 • updated 3 months ago by Stephane Plaisance360
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Trimmomatic destroys right-hand paired-end sequences, how to avoid?
trimmomatic qc written 3 months ago by dec98690 • updated 3 months ago by Martombo2.0k
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Cannot match machine name with Machine Type
trimmomatic fastq qc rna-seq written 3 months ago by dec98690 • updated 3 months ago by Devon Ryan79k
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QC of Fastq files
qc sequencing written 4 months ago by raya.girish20
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Issues running RNAseqc on my bam file
picard qc bam rnaseqc rna written 7 months ago by vineelagangalapudi0 • updated 7 months ago by Pierre Lindenbaum107k
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RSeQC installation error
python ngs qc rseqc written 7 months ago by bioinfo890 • updated 7 months ago by h.mon14k
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should I merge fastq files for different lanes before do QC?
merge qc rna-seq written 7 months ago by Lila M 370 • updated 7 months ago by i.sudbery2.1k
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Dereplication step leads to increased file size
wgs metagenomics paired end qc written 10 months ago by aditijangid660 • updated 8 months ago by Ram15k
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Error while installing RSeQC
rnaseq qc rseqc written 8 months ago by KVC_bioinfo310 • updated 8 months ago by WouterDeCoster28k
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Post alignment QC of RNA-seq data
qc fastqc written 8 months ago by KVC_bioinfo310 • updated 8 months ago by Brian Bushnell15k
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FastQC not making html output report.
adapter trim ngs qc rna-seq fastqc written 2.1 years ago by Shahzad10 • updated 8 months ago by Philipp Bayer5.4k
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How to plot VCF missingness per sample (.imiss) and per variant (.lmiss) in python?
vcf qc plink vcftools written 14 months ago by William4.2k • updated 9 months ago by Biostar ♦♦ 20
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What are the available methods to detect cross-sample contamination of NGS data?
ngs qc written 10 months ago by MAPK1.2k • updated 10 months ago by Brian Bushnell15k
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trim_galore output: val_1 and val_2 files??
qc rna-seq written 11 months ago by radlinsky0 • updated 11 months ago by h.fushimi.x68910
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Cleaning RNA-Seq data from rRNA
rrna cleaning qc rna-seq written 2.1 years ago by debitboro70 • updated 12 months ago by h.mon14k
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vcftools QC process
vcf qc vcftools sequencing written 13 months ago by chengyi310000
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