Showing: qcreset
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4
votes
2
answers
641
views
2
answers
Output per variant and per sample heterozygosity fraction from VCF.
vcf qc written 12 months ago by William3.7k • updated 12 months ago by Pierre Lindenbaum91k
1
vote
1
answer
602
views
1
answer
How to find/decipher Trimmomatic Output
trimmomatic qc rna-seq written 12 months ago by nikelle.petrillo70 • updated 12 months ago by mastal5111.4k
4
votes
1
answer
500
views
1
answer
QC tool for targeted gene panel (like FastQC for WGS)
targeted-gene panel qc written 12 months ago by nbhardwaj40 • updated 12 months ago by Charles Warden4.7k
8
votes
2
answers
4.7k
views
2
answers
0
votes
0
answers
329
views
0
answers
0
votes
1
answer
1.5k
views
1
answer
Paired End Trimmomatic producing asymmetric paired read files.
trimmomatic qc rna-seq written 15 months ago by Biogeek230 • updated 15 months ago by Goutham Atla7.0k
0
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0
answers
527
views
0
answers
0
votes
0
answers
919
views
0
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QC after Imputation
gwas qc myposts written 16 months ago by Mir090 • updated 16 months ago by SES7.8k
1
vote
2
answers
548
views
2
answers
QC of ChIPseq data (controlling false negatives)
chip-seq qc written 20 months ago by bio.abdul.kader80 • updated 20 months ago by Ying W3.5k
3
votes
0
answers
1.4k
views
0
answers
6
votes
1
answer
5.0k
views
1
answer
trimming fastq files with Trimmomatic
qc rna-seq written 22 months ago by rodrigo.duarte8810 • updated 22 months ago by Brice Sarver2.3k
9
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0
answers
978
views
0
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0
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0
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1.1k
views
0
answers
8
votes
1
answer
1.3k
views
1
answer
How To Handle Ns In The Middle Of Reads
qc fastqc written 3.2 years ago by kautilya340 • updated 23 months ago by Gabriel R.1.8k
67
votes
0
answers
6.4k
views
65 follow
0
answers
1
vote
0
answers
725
views
0
answers
9
votes
1
answer
1.4k
views
1
answer
4
votes
2
answers
1.3k
views
2
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QC and biological repeats of small RNA sequencing data
small rna-seq qc rna sequencing srna-seq srna written 2.2 years ago by kevolinchen20 • updated 2.1 years ago by Biostar ♦♦ 10
3
votes
1
answer
3.2k
views
1
answer
How To Use Cutadapt Effectively
qc primer written 3.5 years ago by roll150 • updated 2.1 years ago by Biostar ♦♦ 10
83
votes
2
answers
22k
views
45 follow
2
answers
Tutorial: Fastq Quality Control Shootout
trimming fastq qc quality tutorial written 4.5 years ago by Istvan Albert ♦♦ 70k • updated 2.3 years ago by caelyn520131410
5
votes
1
answer
1.8k
views
1
answer
Overrepresented Sequences Question
qc written 3.6 years ago by Tonyzeng250 • updated 2.3 years ago by Biostar ♦♦ 10
7
votes
2
answers
4.0k
views
5 follow
2
answers
Ribosomal Intervals For Collectrnaseqmetrics
picard qc rna-seq written 4.0 years ago by Johan740 • updated 2.3 years ago by Kamil1.4k
17
votes
2
answers
2.9k
views
8 follow
2
answers
0
votes
0
answers
671
views
0
answers
QC for custom Ampliseq panels
ampliseq amplicon qc written 2.6 years ago by Danielk520
0
votes
0
answers
1.7k
views
0
answers
MACH imputation result QC
imputation rsq mach qc snp written 2.7 years ago by Zhenyu150
19
votes
4
answers
9.2k
views
11 follow
4
answers
FastQ quality check : what can we correct ?
fastq qc written 2.7 years ago by Rad740
2
votes
1
answer
1.3k
views
1
answer
Quality control ChiP-Seq
chip-seq trimming qc written 2.7 years ago by marina-orlova50 • updated 2.7 years ago by Devon Ryan63k
3
votes
1
answer
1.3k
views
1
answer
QC Sequence Data from VCF
vcf qc sequencing written 2.7 years ago by Katie D'Aco950 • updated 2.7 years ago by kautilya340
7
votes
1
answer
2.1k
views
1
answer
Low transition/transversion ratio: alignment or caller problem?
vcf somatic qc whole genome written 2.8 years ago by DoubleD130 • updated 2.8 years ago by Cyriac Kandoth4.5k
24
votes
1
answer
5.2k
views
14 follow
1
answer
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