Showing: qcreset
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How do you remove coverage outliers in sequencing count data?
R quality control qc bisulfite sequencing written 15 months ago by biohack92130 • updated 15 months ago by dariober7.9k
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3
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3
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Cross-species contamination in NGS data
qc sequencing written 15 months ago by T40 • updated 15 months ago by h.mon7.3k
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550
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1
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Is it good practice to convert lowest quality genotyes to missing?
vcf qc genotypes written 15 months ago by William3.9k • updated 15 months ago by Zev.Kronenberg10k
4
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2
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763
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Output per variant and per sample heterozygosity fraction from VCF.
vcf qc written 16 months ago by William3.9k • updated 16 months ago by Pierre Lindenbaum96k
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807
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1
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How to find/decipher Trimmomatic Output
trimmomatic qc rna-seq written 16 months ago by nikelle.petrillo70 • updated 16 months ago by mastal5111.7k
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QC tool for targeted gene panel (like FastQC for WGS)
targeted-gene panel qc written 16 months ago by nbhardwaj40 • updated 16 months ago by Charles Warden4.8k
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406
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Paired End Trimmomatic producing asymmetric paired read files.
trimmomatic qc rna-seq written 18 months ago by Biogeek240 • updated 18 months ago by Goutham Atla7.2k
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614
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QC after Imputation
gwas qc myposts written 20 months ago by Mir090 • updated 20 months ago by SES7.9k
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QC of ChIPseq data (controlling false negatives)
chip-seq qc written 2.0 years ago by bio.abdul.kader80 • updated 2.0 years ago by Ying W3.6k
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1.7k
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6
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trimming fastq files with Trimmomatic
qc rna-seq written 2.1 years ago by rodrigo.duarte8810 • updated 2.1 years ago by Brice Sarver2.3k
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How To Handle Ns In The Middle Of Reads
qc fastqc written 3.5 years ago by kautilya340 • updated 2.3 years ago by Gabriel R.1.9k
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65 follow
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1
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1.4k
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QC and biological repeats of small RNA sequencing data
small rna-seq qc rna sequencing srna-seq srna written 2.5 years ago by kevolinchen30 • updated 2.4 years ago by Biostar ♦♦ 20
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1
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3.4k
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1
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How To Use Cutadapt Effectively
qc primer written 3.8 years ago by roll160 • updated 2.4 years ago by Biostar ♦♦ 20
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2
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45 follow
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Tutorial: Fastq Quality Control Shootout
trimming fastq qc quality tutorial written 4.8 years ago by Istvan Albert ♦♦ 73k • updated 2.6 years ago by caelyn520131410
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Overrepresented Sequences Question
qc written 3.9 years ago by Tonyzeng250 • updated 2.6 years ago by Biostar ♦♦ 20
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5 follow
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Ribosomal Intervals For Collectrnaseqmetrics
picard qc rna-seq written 4.3 years ago by Johan760 • updated 2.6 years ago by Kamil1.5k
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3.1k
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8 follow
2
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0
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760
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QC for custom Ampliseq panels
ampliseq amplicon qc written 2.9 years ago by Danielk530
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1.8k
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MACH imputation result QC
imputation rsq mach qc snp written 3.0 years ago by Zhenyu150
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4
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10.0k
views
11 follow
4
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FastQ quality check : what can we correct ?
fastq qc written 3.0 years ago by Rad780
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