Showing: qcreset
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RNA-SeQC does not calculate information about "Strand Specificity"
qc rna-seq written 15 months ago by Lina F110 • updated 15 months ago by Charles Warden5.0k
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Yeast GTF file needed for RNA-SeQC run
gtf qc yeast rna-seq rna-seqc written 15 months ago by Lina F110 • updated 15 months ago by apa@stowers340
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RNA-seq quality control
next-gen alignment qc star rna-seq written 17 months ago by Ron720 • updated 17 months ago by Devon Ryan78k
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BLAST pipeline operations
assembly qc written 19 months ago by skbrimer480
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Making Linkage Disequilibrium blocks from SNPs position for NCBI Build 38
gwas qc ld population study written 21 months ago by Bahar40 • updated 21 months ago by chrchang5233.1k
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Which software do you use for RNA-seq data quality control?
qc quality-control rna-seq written 3.9 years ago by Christian2.6k • updated 22 months ago by Michael Dondrup43k
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reduced quality in a paired-end R2 reads
qc quality chip-seq rna-seq fastqc written 22 months ago by Assa Yeroslaviz1.1k • updated 22 months ago by Brian Bushnell15k
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LD pruning and other QC before association analysis ?
gwas qc written 2.0 years ago by Picasa340 • updated 23 months ago by Nick40
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Understanding Trimmomatic Sliding Window Approach
trimmomatic quality control qc rna-seq written 23 months ago by nikelle.petrillo80 • updated 23 months ago by biomaster180
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3' Bias in RNASEQ data
bias qc rna-seq written 23 months ago by mjg20 • updated 23 months ago by Chirag Nepal2.0k
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Quality Control interpretation
qc microarray plot written 23 months ago by vahideh10 • updated 23 months ago by vchris_ngs4.4k
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How do you remove coverage outliers in sequencing count data?
R quality control qc bisulfite sequencing written 2.0 years ago by biohack92130 • updated 2.0 years ago by dariober9.0k
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Cross-species contamination in NGS data
qc sequencing written 2.0 years ago by T40 • updated 2.0 years ago by h.mon13k
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Is it good practice to convert lowest quality genotyes to missing?
vcf qc genotypes written 2.1 years ago by William4.2k • updated 2.1 years ago by Zev.Kronenberg11k
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Output per variant and per sample heterozygosity fraction from VCF.
vcf qc written 2.1 years ago by William4.2k • updated 2.1 years ago by Pierre Lindenbaum106k
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How to find/decipher Trimmomatic Output
trimmomatic qc rna-seq written 2.1 years ago by nikelle.petrillo80 • updated 2.1 years ago by mastal5111.8k
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QC tool for targeted gene panel (like FastQC for WGS)
targeted-gene panel qc written 2.1 years ago by nbhardwaj80 • updated 2.1 years ago by Charles Warden5.0k
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