Showing: qcreset
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91
votes
2
answers
25k
views
55 follow
2
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Tutorial: Fastq Quality Control Shootout
trimming fastq qc quality tutorial written 5.7 years ago by Istvan Albert ♦♦ 77k • updated 3.5 years ago by caelyn520131410
67
votes
0
answers
7.7k
views
65 follow
0
answers
24
votes
3
answers
11k
views
26 follow
3
answers
Which software do you use for RNA-seq data quality control?
qc quality-control rna-seq written 4.0 years ago by Christian2.6k • updated 2.0 years ago by Michael Dondrup44k
27
votes
2
answers
6.4k
views
19 follow
2
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9
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0
answers
6.0k
views
0
answers
9
votes
0
answers
1.5k
views
0
answers
12
votes
4
answers
6.2k
views
6 follow
4
answers
Looking For Reliable Tools To Do Quality Filtering Of Fastq Files
fastq qc written 5.8 years ago by dataminer8950 • updated 5.8 years ago by Madelaine Gogol5.0k
19
votes
2
answers
4.9k
views
8 follow
2
answers
22
votes
4
answers
11k
views
11 follow
4
answers
FastQ quality check : what can we correct ?
fastq qc written 4.0 years ago by Rad790
4
votes
1
answer
2.3k
views
1
answer
Qualimap Settings For A Very Large Bam, Chunk Size And Number Of Windows
bam qc written 5.3 years ago by William4.2k • updated 5.2 years ago by Fennan30
12
votes
2
answers
6.6k
views
5 follow
2
answers
9
votes
3
answers
3.8k
views
3
answers
LD pruning and other QC before association analysis ?
gwas qc written 2.2 years ago by Picasa350 • updated 2.1 years ago by Nick40
8
votes
2
answers
5.7k
views
7 follow
2
answers
Ribosomal Intervals For Collectrnaseqmetrics
picard qc rna-seq written 5.3 years ago by Johan780 • updated 3.5 years ago by Kamil1.8k
9
votes
6
answers
3.9k
views
7 follow
6
answers
Illumina Mate Pair Read Duplication Level
illumina qc written 5.0 years ago by abc40 • updated 4.7 years ago by Biomonika (Noolean)3.0k
1
vote
1
answer
2.6k
views
1
answer
8
votes
1
answer
1.7k
views
1
answer
How To Handle Ns In The Middle Of Reads
qc fastqc written 4.5 years ago by kautilya360 • updated 3.2 years ago by Gabriel R.2.4k
4
votes
3
answers
6.4k
views
3
answers
FastQC not making html output report.
adapter trim ngs qc rna-seq fastqc written 2.2 years ago by Shahzad10 • updated 9 months ago by Philipp Bayer5.5k
9
votes
4
answers
6.2k
views
4
answers
Is Paired End analysis possible with FASTQC?
paired-end dna-seq qc fastqc written 2.1 years ago by chefarov80 • updated 4 months ago by Stephane Plaisance360
3
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0
answers
1.7k
views
0
answers
13
votes
2
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558
views
7 follow
2
answers
2
votes
2
answers
699
views
5 follow
2
answers
What are the available methods to detect cross-sample contamination of NGS data?
ngs qc written 11 months ago by MAPK1.2k • updated 11 months ago by Brian Bushnell15k
3
votes
1
answer
1.2k
views
1
answer
Qc Of A New Study Sample In A Cost-Effective Way
array qc snp genotyping written 6.6 years ago by Thomas720 • updated 6.5 years ago by Matt Shirley8.4k
3
votes
1
answer
1.1k
views
1
answer
Seq Qc/Trimming Code Preferences?
qc trimming next-gen rna written 6.5 years ago by Holly30 • updated 6.5 years ago by Chris Penkett470
0
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1
answer
2.6k
views
1
answer
3
votes
2
answers
6.7k
views
2
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What Does Qc-Passed/Failed Reads Mean In Samtools Flagstat?
samtools qc written 6.5 years ago by KJ Lim120 • updated 6.5 years ago by Lim0
6
votes
1
answer
1.0k
views
1
answer
2-3 Example Datasets (References) With Known Variants?
exome variant qc written 6.3 years ago by Angel190 • updated 6.3 years ago by Pascal1.4k
3
votes
1
answer
3.0k
views
1
answer
Picard Bait And Target Sequences For Hybrid Selection Metrics
exome picard qc written 6.3 years ago by Dan D6.5k • updated 6.3 years ago by Sean Davis24k
13
votes
1
answer
1.9k
views
5 follow
1
answer
Duplication And Quality Control In Published Ngs Data
quality qc written 6.2 years ago by Ido Tamir4.8k • updated 6.2 years ago by Obi Griffith16k
3
votes
1
answer
2.0k
views
1
answer
3
votes
0
answers
1.5k
views
0
answers
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