Showing: qcreset
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RNA-SeQC does not calculate information about "Strand Specificity"
qc rna-seq written 7 days ago by Lina F50 • updated 7 days ago by Charles Warden4.6k
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Yeast GTF file needed for RNA-SeQC run
gtf qc yeast rna-seq rna-seqc written 7 days ago by Lina F50 • updated 7 days ago by apa@stowers320
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RNA-seq quality control
next-gen alignment qc star rna-seq written 9 weeks ago by Ron480 • updated 9 weeks ago by Devon Ryan60k
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BLAST pipeline operations
assembly qc written 4 months ago by skbrimer330
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reduced quality in a paired-end R2 reads
qc quality chip-seq rna-seq fastqc written 7 months ago by Assa Yeroslaviz1000 • updated 7 months ago by Brian Bushnell8.8k
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Understanding Trimmomatic Sliding Window Approach
trimmomatic quality control qc rna-seq written 8 months ago by nikelle.petrillo50 • updated 8 months ago by biomaster140
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3' Bias in RNASEQ data
bias qc rna-seq written 8 months ago by mjg20 • updated 8 months ago by Chirag Nepal1.7k
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Is Paired End analysis possible with FASTQC?
paired-end dna-seq qc fastqc written 8 months ago by chefarov50 • updated 6 months ago by Biostar ♦♦ 10
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Quality Control interpretation
qc microarray plot written 8 months ago by vahideh 10 • updated 8 months ago by vchris_ngs2.7k
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How do you remove coverage outliers in sequencing count data?
R quality control qc bisulfite sequencing written 9 months ago by biohack92130 • updated 9 months ago by dariober7.1k
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LD pruning and other QC before association analysis ?
gwas qc written 9 months ago by Picasa260 • updated 7 months ago by Nick20
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Cross-species contamination in NGS data
qc sequencing written 9 months ago by T40 • updated 9 months ago by h.mon4.4k
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Cleaning RNA-Seq data from rRNA
rrna cleaning qc rna-seq written 9 months ago by debitboro50 • updated 9 months ago by callejas_callejas160
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Is it good practice to convert lowest quality genotyes to missing?
vcf qc genotypes written 9 months ago by William3.6k • updated 9 months ago by Zev.Kronenberg10k
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Output per variant and per sample heterozygosity fraction from VCF.
vcf qc written 9 months ago by William3.6k • updated 9 months ago by Pierre Lindenbaum88k
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How to find/decipher Trimmomatic Output
trimmomatic qc rna-seq written 10 months ago by nikelle.petrillo50 • updated 10 months ago by mastal5111.3k
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QC tool for targeted gene panel (like FastQC for WGS)
targeted-gene panel qc written 10 months ago by nbhardwaj40 • updated 10 months ago by Charles Warden4.6k
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Paired End Trimmomatic producing asymmetric paired read files.
trimmomatic qc rna-seq written 12 months ago by Biogeek230 • updated 12 months ago by Goutham Atla6.7k
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