Showing: qcreset
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RNA-SeQC does not calculate information about "Strand Specificity"
qc rna-seq written 5 weeks ago by Lina F70 • updated 5 weeks ago by Charles Warden4.6k
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Yeast GTF file needed for RNA-SeQC run
gtf qc yeast rna-seq rna-seqc written 5 weeks ago by Lina F70 • updated 5 weeks ago by apa@stowers320
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RNA-seq quality control
next-gen alignment qc star rna-seq written 3 months ago by Ron500 • updated 3 months ago by Devon Ryan62k
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BLAST pipeline operations
assembly qc written 5 months ago by skbrimer330
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reduced quality in a paired-end R2 reads
qc quality chip-seq rna-seq fastqc written 8 months ago by Assa Yeroslaviz1.0k • updated 8 months ago by Brian Bushnell9.6k
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Understanding Trimmomatic Sliding Window Approach
trimmomatic quality control qc rna-seq written 9 months ago by nikelle.petrillo70 • updated 9 months ago by biomaster140
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3' Bias in RNASEQ data
bias qc rna-seq written 9 months ago by mjg20 • updated 9 months ago by Chirag Nepal1.7k
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Is Paired End analysis possible with FASTQC?
paired-end dna-seq qc fastqc written 9 months ago by chefarov50 • updated 7 months ago by Biostar ♦♦ 10
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Quality Control interpretation
qc microarray plot written 9 months ago by vahideh 10 • updated 9 months ago by vchris_ngs2.7k
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FastQC not making html output report.
adapter trim ngs qc rna-seq fastqc written 9 months ago by Shahzad0 • updated 19 hours ago by mafer_3090
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How do you remove coverage outliers in sequencing count data?
R quality control qc bisulfite sequencing written 10 months ago by biohack92130 • updated 10 months ago by dariober7.3k
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LD pruning and other QC before association analysis ?
gwas qc written 10 months ago by Picasa270 • updated 8 months ago by Nick20
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Cross-species contamination in NGS data
qc sequencing written 10 months ago by T40 • updated 10 months ago by h.mon4.5k
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Cleaning RNA-Seq data from rRNA
rrna cleaning qc rna-seq written 10 months ago by debitboro50 • updated 10 months ago by callejas_callejas170
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Is it good practice to convert lowest quality genotyes to missing?
vcf qc genotypes written 10 months ago by William3.6k • updated 10 months ago by Zev.Kronenberg10k
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Output per variant and per sample heterozygosity fraction from VCF.
vcf qc written 10 months ago by William3.6k • updated 10 months ago by Pierre Lindenbaum89k
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How to find/decipher Trimmomatic Output
trimmomatic qc rna-seq written 11 months ago by nikelle.petrillo70 • updated 11 months ago by mastal5111.4k
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QC tool for targeted gene panel (like FastQC for WGS)
targeted-gene panel qc written 11 months ago by nbhardwaj40 • updated 11 months ago by Charles Warden4.6k
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