Showing: qcreset
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vcftools QC process
vcf qc vcftools sequencing written 18 days ago by chengyi310000
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RNA-SeQC does not calculate information about "Strand Specificity"
qc rna-seq written 3 months ago by Lina F80 • updated 3 months ago by Charles Warden4.7k
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Yeast GTF file needed for RNA-SeQC run
gtf qc yeast rna-seq rna-seqc written 3 months ago by Lina F80 • updated 3 months ago by apa@stowers320
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RNA-seq quality control
next-gen alignment qc star rna-seq written 5 months ago by Ron540 • updated 5 months ago by Devon Ryan64k
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BLAST pipeline operations
assembly qc written 7 months ago by skbrimer340
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reduced quality in a paired-end R2 reads
qc quality chip-seq rna-seq fastqc written 10 months ago by Assa Yeroslaviz1.1k • updated 10 months ago by Brian Bushnell10k
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Understanding Trimmomatic Sliding Window Approach
trimmomatic quality control qc rna-seq written 11 months ago by nikelle.petrillo70 • updated 11 months ago by biomaster140
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3' Bias in RNASEQ data
bias qc rna-seq written 11 months ago by mjg20 • updated 11 months ago by Chirag Nepal1.8k
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Is Paired End analysis possible with FASTQC?
paired-end dna-seq qc fastqc written 11 months ago by chefarov50 • updated 9 months ago by Biostar ♦♦ 10
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Quality Control interpretation
qc microarray plot written 11 months ago by vahideh 10 • updated 11 months ago by vchris_ngs2.9k
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FastQC not making html output report.
adapter trim ngs qc rna-seq fastqc written 12 months ago by Shahzad10 • updated 10 weeks ago by mafer_3090
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How do you remove coverage outliers in sequencing count data?
R quality control qc bisulfite sequencing written 12 months ago by biohack92130 • updated 12 months ago by dariober7.5k
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LD pruning and other QC before association analysis ?
gwas qc written 12 months ago by Picasa270 • updated 11 months ago by Nick20
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Cross-species contamination in NGS data
qc sequencing written 12 months ago by T40 • updated 12 months ago by h.mon5.4k
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Cleaning RNA-Seq data from rRNA
rrna cleaning qc rna-seq written 13 months ago by debitboro50 • updated 13 months ago by Buffo280
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Is it good practice to convert lowest quality genotyes to missing?
vcf qc genotypes written 13 months ago by William3.8k • updated 13 months ago by Zev.Kronenberg10k
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Output per variant and per sample heterozygosity fraction from VCF.
vcf qc written 13 months ago by William3.8k • updated 13 months ago by Pierre Lindenbaum92k
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