Showing: qcreset
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67
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0
answers
7.5k
views
65 follow
0
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88
votes
2
answers
24k
views
51 follow
2
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Tutorial: Fastq Quality Control Shootout
trimming fastq qc quality tutorial written 5.6 years ago by Istvan Albert ♦♦ 76k • updated 3.4 years ago by caelyn520131410
24
votes
3
answers
11k
views
25 follow
3
answers
Which software do you use for RNA-seq data quality control?
qc quality-control rna-seq written 3.9 years ago by Christian2.6k • updated 22 months ago by Michael Dondrup43k
27
votes
2
answers
6.2k
views
19 follow
2
answers
22
votes
4
answers
11k
views
11 follow
4
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FastQ quality check : what can we correct ?
fastq qc written 3.8 years ago by Rad790
10
votes
1
answer
1.1k
views
9 follow
1
answer
should I merge fastq files for different lanes before do QC?
merge qc rna-seq written 6 months ago by Lila M 370 • updated 6 months ago by i.sudbery1.9k
19
votes
2
answers
4.7k
views
8 follow
2
answers
20
votes
3
answers
4.7k
views
7 follow
3
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Transition/Transversion Ratio From Fastq Files
fastq fastqc exome-sequencing qc exome qualitycontrol written 4.9 years ago by venkateshr89680 • updated 4.7 years ago by rob234king550
9
votes
6
answers
3.8k
views
7 follow
6
answers
Illumina Mate Pair Read Duplication Level
illumina qc written 4.9 years ago by abc40 • updated 4.5 years ago by Biomonika (Noolean)3.0k
13
votes
2
answers
512
views
7 follow
2
answers
12
votes
4
answers
6.1k
views
6 follow
4
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Looking For Reliable Tools To Do Quality Filtering Of Fastq Files
fastq qc written 5.6 years ago by dataminer8950 • updated 5.6 years ago by Madelaine Gogol4.9k
13
votes
1
answer
1.9k
views
5 follow
1
answer
Duplication And Quality Control In Published Ngs Data
quality qc written 6.1 years ago by Ido Tamir4.8k • updated 6.1 years ago by Obi Griffith16k
7
votes
2
answers
5.5k
views
5 follow
2
answers
Ribosomal Intervals For Collectrnaseqmetrics
picard qc rna-seq written 5.1 years ago by Johan770 • updated 3.4 years ago by Kamil1.8k
2
votes
2
answers
580
views
5 follow
2
answers
What are the available methods to detect cross-sample contamination of NGS data?
ngs qc written 9 months ago by MAPK1.2k • updated 9 months ago by Brian Bushnell15k
7
votes
3
answers
736
views
5 follow
3
answers
Post alignment QC of RNA-seq data
qc fastqc written 7 months ago by KVC_bioinfo310 • updated 7 months ago by Brian Bushnell15k
3
votes
2
answers
6.5k
views
2
answers
What Does Qc-Passed/Failed Reads Mean In Samtools Flagstat?
samtools qc written 6.3 years ago by KJ Lim120 • updated 6.3 years ago by Lim0
9
votes
0
answers
5.8k
views
0
answers
3
votes
2
answers
2.7k
views
2
answers
4
votes
1
answer
2.1k
views
1
answer
Qualimap Settings For A Very Large Bam, Chunk Size And Number Of Windows
bam qc written 5.2 years ago by William4.2k • updated 5.0 years ago by Fennan30
8
votes
2
answers
6.3k
views
2
answers
2
votes
2
answers
584
views
2
answers
trim_galore output: val_1 and val_2 files??
qc rna-seq written 10 months ago by radlinsky0 • updated 10 months ago by h.fushimi.x68910
3
votes
0
answers
285
views
0
answers
QC of Fastq files
qc sequencing written 3 months ago by raya.girish20
1
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0
answers
269
views
0
answers
3
votes
1
answer
1.1k
views
1
answer
Seq Qc/Trimming Code Preferences?
qc trimming next-gen rna written 6.4 years ago by Holly30 • updated 6.3 years ago by Chris Penkett470
3
votes
1
answer
1.9k
views
1
answer
0
votes
1
answer
3.2k
views
1
answer
How To Determine Pcr Duplicate/Redundant Reads In Ngs Data?
duplicates qc pcr written 4.7 years ago by JacobS870 • updated 4.7 years ago by Istvan Albert ♦♦ 76k
2
votes
1
answer
2.1k
views
1
answer
Permission Denied Error While Using Quake
assembly qc written 4.5 years ago by Medhat7.5k
3
votes
1
answer
3.9k
views
1
answer
How To Use Cutadapt Effectively
qc primer written 4.5 years ago by roll200 • updated 3.2 years ago by Biostar ♦♦ 20
2
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0
answers
1.4k
views
0
answers
1
vote
1
answer
2.5k
views
1
answer
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