Showing: qcreset
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67
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0
answers
6.9k
views
65 follow
0
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84
votes
2
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23k
views
45 follow
2
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Tutorial: Fastq Quality Control Shootout
trimming fastq qc quality tutorial written 5.0 years ago by Istvan Albert ♦♦ 73k • updated 2.8 years ago by caelyn520131410
24
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3
answers
9.4k
views
24 follow
3
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Which software do you use for RNA-seq data quality control?
qc quality-control rna-seq written 3.3 years ago by Christian2.5k • updated 15 months ago by Michael Dondrup43k
24
votes
1
answer
5.6k
views
14 follow
1
answer
22
votes
4
answers
10k
views
11 follow
4
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FastQ quality check : what can we correct ?
fastq qc written 3.2 years ago by Rad780
18
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2
answers
3.3k
views
8 follow
2
answers
20
votes
3
answers
4.2k
views
7 follow
3
answers
Transition/Transversion Ratio From Fastq Files
fastq fastqc exome-sequencing qc exome qualitycontrol written 4.3 years ago by venkateshr89650 • updated 4.2 years ago by rob234king530
9
votes
6
answers
3.5k
views
7 follow
6
answers
Illumina Mate Pair Read Duplication Level
illumina qc written 4.3 years ago by abc40 • updated 3.9 years ago by Biomonika (Noolean)3.0k
13
votes
2
answers
312
views
7 follow
2
answers
12
votes
4
answers
5.5k
views
6 follow
4
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Looking For Reliable Tools To Do Quality Filtering Of Fastq Files
fastq qc written 5.0 years ago by dataminer8950 • updated 5.0 years ago by Madelaine Gogol4.8k
12
votes
1
answer
1.7k
views
5 follow
1
answer
Duplication And Quality Control In Published Ngs Data
quality qc written 5.5 years ago by Ido Tamir4.7k • updated 5.5 years ago by Obi Griffith15k
7
votes
2
answers
4.7k
views
5 follow
2
answers
Ribosomal Intervals For Collectrnaseqmetrics
picard qc rna-seq written 4.5 years ago by Johan770 • updated 2.8 years ago by Kamil1.6k
2
votes
2
answers
247
views
5 follow
2
answers
What are the available methods to detect cross-sample contamination of NGS data?
ngs qc written 9 weeks ago by MAPK1.0k • updated 9 weeks ago by Brian Bushnell14k
3
votes
2
answers
5.7k
views
2
answers
What Does Qc-Passed/Failed Reads Mean In Samtools Flagstat?
samtools qc written 5.7 years ago by KJ Lim110 • updated 5.7 years ago by Lim0
9
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5.5k
views
0
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3
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2
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2.6k
views
2
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4
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1
answer
1.8k
views
1
answer
Qualimap Settings For A Very Large Bam, Chunk Size And Number Of Windows
bam qc written 4.6 years ago by William3.9k • updated 4.4 years ago by Fennan30
8
votes
2
answers
5.5k
views
2
answers
2
votes
2
answers
178
views
2
answers
trim_galore output: val_1 and val_2 files??
qc rna-seq written 3 months ago by radlinsky0 • updated 3 months ago by h.fushimi.x68910
3
votes
3
answers
162
views
3
answers
Post alignment QC of RNA-seq data
qc fastqc written 3 days ago by Jessica_bioinfo10 • updated 3 days ago by Brian Bushnell14k
3
votes
1
answer
1.0k
views
1
answer
Seq Qc/Trimming Code Preferences?
qc trimming next-gen rna written 5.8 years ago by Holly30 • updated 5.7 years ago by Chris Penkett470
3
votes
1
answer
1.8k
views
1
answer
0
votes
1
answer
2.8k
views
1
answer
How To Determine Pcr Duplicate/Redundant Reads In Ngs Data?
duplicates qc pcr written 4.1 years ago by JacobS850 • updated 4.1 years ago by Istvan Albert ♦♦ 73k
2
votes
1
answer
1.8k
views
1
answer
Permission Denied Error While Using Quake
assembly qc written 3.9 years ago by Medhat6.9k
3
votes
1
answer
3.5k
views
1
answer
How To Use Cutadapt Effectively
qc primer written 3.9 years ago by roll160 • updated 2.6 years ago by Biostar ♦♦ 20
2
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0
answers
1.2k
views
0
answers
1
vote
1
answer
2.2k
views
1
answer
8
votes
1
answer
1.4k
views
1
answer
How To Handle Ns In The Middle Of Reads
qc fastqc written 3.7 years ago by kautilya340 • updated 2.4 years ago by Gabriel R.2.0k
3
votes
1
answer
1.4k
views
1
answer
Keeping A Set Of Data For Qc In Plink
data qc plink dataset written 3.6 years ago by tom.d.brocklehurst0 • updated 3.6 years ago by zx87543.7k
9
votes
0
answers
1.2k
views
0
answers
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