Showing: qcreset
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25
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17 follow
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222
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Issues running RNAseqc on my bam file
picard qc bam rnaseqc rna written 7 weeks ago by vineelagangalapudi0 • updated 7 weeks ago by Pierre Lindenbaum102k
0
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1
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187
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1
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RSeQC installation error
python ngs qc rseqc written 8 weeks ago by bioinfo890 • updated 8 weeks ago by h.mon9.8k
6
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1
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389
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7 follow
1
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should I merge fastq files for different lanes before do QC?
merge qc rna-seq written 11 weeks ago by Lila M 370 • updated 11 weeks ago by i.sudbery1.7k
3
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0
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252
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Dereplication step leads to increased file size
wgs metagenomics paired end qc written 4 months ago by aditijangid660 • updated 11 weeks ago by Ram12k
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356
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0
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1
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208
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Error while installing RSeQC
rnaseq qc rseqc written 12 weeks ago by KVC_bioinfo230 • updated 12 weeks ago by WouterDeCoster24k
7
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3
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343
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5 follow
3
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Post alignment QC of RNA-seq data
qc fastqc written 12 weeks ago by KVC_bioinfo230 • updated 12 weeks ago by Brian Bushnell15k
4
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3
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4.6k
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3
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FastQC not making html output report.
adapter trim ngs qc rna-seq fastqc written 19 months ago by Shahzad10 • updated 3 months ago by Philipp Bayer5.0k
0
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346
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How to plot VCF missingness per sample (.imiss) and per variant (.lmiss) in python?
vcf qc plink vcftools written 9 months ago by William4.0k • updated 4 months ago by Biostar ♦♦ 20
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262
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2
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366
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5 follow
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What are the available methods to detect cross-sample contamination of NGS data?
ngs qc written 5 months ago by MAPK1.1k • updated 5 months ago by Brian Bushnell15k
2
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2
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315
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2
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trim_galore output: val_1 and val_2 files??
qc rna-seq written 6 months ago by radlinsky0 • updated 6 months ago by h.fushimi.x68910
8
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3.5k
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4
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Cleaning RNA-Seq data from rRNA
rrna cleaning qc rna-seq written 20 months ago by debitboro70 • updated 6 months ago by h.mon9.8k
13
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386
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7 follow
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0
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224
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vcftools QC process
vcf qc vcftools sequencing written 8 months ago by chengyi310000
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248
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0
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4
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1
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613
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1
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0
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1
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399
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1
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RNA-SeQC does not calculate information about "Strand Specificity"
qc rna-seq written 11 months ago by Lina F110 • updated 11 months ago by Charles Warden4.9k
2
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1
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538
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1
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Yeast GTF file needed for RNA-SeQC run
gtf qc yeast rna-seq rna-seqc written 11 months ago by Lina F110 • updated 11 months ago by apa@stowers320
1
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443
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2
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468
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RNA-seq quality control
next-gen alignment qc star rna-seq written 13 months ago by Ron680 • updated 13 months ago by Devon Ryan74k
0
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464
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0
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2
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360
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BLAST pipeline operations
assembly qc written 15 months ago by skbrimer430
3
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2.6k
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2
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3
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3
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649
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Making Linkage Disequilibrium blocks from SNPs position for NCBI Build 38
gwas qc ld population study written 17 months ago by Bahar40 • updated 16 months ago by chrchang5232.8k
9
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3
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4.3k
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3
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Is Paired End analysis possible with FASTQC?
paired-end dna-seq qc fastqc written 19 months ago by chefarov80 • updated 17 months ago by Biostar ♦♦ 20
3
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0
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993
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0
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