Showing: qcreset
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81
votes
2
answers
21k
views
43 follow
2
answers
Tutorial: Fastq Quality Control Shootout
trimming fastq qc quality tutorial written 4.3 years ago by Istvan Albert ♦♦ 69k • updated 2.1 years ago by caelyn520131410
19
votes
4
answers
8.7k
views
11 follow
4
answers
FastQ quality check : what can we correct ?
fastq qc written 2.5 years ago by Rad730
22
votes
3
answers
6.9k
views
24 follow
3
answers
Which software do you use for RNA-seq data quality control?
qc quality-control rna-seq written 2.6 years ago by Christian2.4k • updated 7 months ago by Michael Dondrup40k
67
votes
0
answers
6.2k
views
65 follow
0
answers
9
votes
0
answers
5.0k
views
0
answers
24
votes
1
answer
5.0k
views
14 follow
1
answer
3
votes
2
answers
4.8k
views
2
answers
What Does Qc-Passed/Failed Reads Mean In Samtools Flagstat?
samtools qc written 5.0 years ago by KJ Lim100 • updated 5.0 years ago by Lim0
12
votes
4
answers
4.8k
views
6 follow
4
answers
Looking For Reliable Tools To Do Quality Filtering Of Fastq Files
fastq qc written 4.4 years ago by dataminer8950 • updated 4.4 years ago by Madelaine Gogol4.7k
8
votes
2
answers
4.5k
views
2
answers
3
votes
1
answer
3.8k
views
1
answer
trimming fastq files with Trimmomatic
qc rna-seq written 20 months ago by rodrigo.duarte880 • updated 20 months ago by Brice Sarver2.3k
7
votes
2
answers
3.8k
views
5 follow
2
answers
Ribosomal Intervals For Collectrnaseqmetrics
picard qc rna-seq written 3.8 years ago by Johan730 • updated 2.1 years ago by Kamil1.4k
20
votes
3
answers
3.6k
views
7 follow
3
answers
Transition/Transversion Ratio From Fastq Files
fastq fastqc exome-sequencing qc exome qualitycontrol written 3.6 years ago by venkateshr89640 • updated 3.5 years ago by rob234king510
9
votes
6
answers
3.1k
views
7 follow
6
answers
Illumina Mate Pair Read Duplication Level
illumina qc written 3.6 years ago by abc40 • updated 3.3 years ago by Noolean2.8k
3
votes
1
answer
3.0k
views
1
answer
How To Use Cutadapt Effectively
qc primer written 3.3 years ago by roll150 • updated 23 months ago by Biostar ♦♦ 10
17
votes
2
answers
2.7k
views
8 follow
2
answers
0
votes
1
answer
2.4k
views
1
answer
How To Determine Pcr Duplicate/Redundant Reads In Ngs Data?
duplicates qc pcr written 3.5 years ago by JacobS820 • updated 3.4 years ago by Istvan Albert ♦♦ 69k
3
votes
2
answers
2.3k
views
2
answers
3
votes
1
answer
2.3k
views
1
answer
Rna-Seq Read Mapping Stats/Metrics
alignment qc rna-seq written 3.5 years ago by pm201350 • updated 3.5 years ago by Mikael Huss4.4k
3
votes
1
answer
2.2k
views
1
answer
Picard Bait And Target Sequences For Hybrid Selection Metrics
exome picard qc written 4.9 years ago by Dan D5.9k • updated 4.9 years ago by Sean Davis22k
7
votes
1
answer
2.0k
views
1
answer
Low transition/transversion ratio: alignment or caller problem?
vcf somatic qc whole genome written 2.6 years ago by DoubleD130 • updated 2.6 years ago by Cyriac Kandoth4.4k
0
votes
1
answer
1.9k
views
1
answer
1
vote
1
answer
1.8k
views
1
answer
1
vote
1
answer
1.8k
views
1
answer
5
votes
1
answer
1.7k
views
1
answer
Overrepresented Sequences Question
qc written 3.4 years ago by Tonyzeng240 • updated 2.1 years ago by Biostar ♦♦ 10
0
votes
0
answers
1.7k
views
0
answers
MACH imputation result QC
imputation rsq mach qc snp written 2.5 years ago by Zhenyu140
2
votes
1
answer
1.6k
views
1
answer
Permission Denied Error While Using Quake
assembly qc written 3.3 years ago by Medhat6.0k
4
votes
1
answer
1.6k
views
1
answer
Qualimap Settings For A Very Large Bam, Chunk Size And Number Of Windows
bam qc written 3.9 years ago by William3.6k • updated 3.8 years ago by Fennan30
3
votes
1
answer
1.6k
views
1
answer
4
votes
3
answers
1.5k
views
3
answers
Is Paired End analysis possible with FASTQC?
paired-end dna-seq qc fastqc written 8 months ago by chefarov50 • updated 6 months ago by Biostar ♦♦ 10
0
votes
0
answers
1.5k
views
0
answers
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