Showing: qcreset
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85
votes
2
answers
24k
views
47 follow
2
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Tutorial: Fastq Quality Control Shootout
trimming fastq qc quality tutorial written 5.4 years ago by Istvan Albert ♦♦ 75k • updated 3.2 years ago by caelyn520131410
67
votes
0
answers
7.3k
views
65 follow
0
answers
18
votes
2
answers
4.4k
views
8 follow
2
answers
27
votes
2
answers
6.1k
views
19 follow
2
answers
24
votes
3
answers
10k
views
25 follow
3
answers
Which software do you use for RNA-seq data quality control?
qc quality-control rna-seq written 3.7 years ago by Christian2.6k • updated 20 months ago by Michael Dondrup43k
9
votes
0
answers
5.7k
views
0
answers
22
votes
4
answers
11k
views
11 follow
4
answers
FastQ quality check : what can we correct ?
fastq qc written 3.6 years ago by Rad790
9
votes
0
answers
1.3k
views
0
answers
13
votes
1
answer
1.8k
views
5 follow
1
answer
Duplication And Quality Control In Published Ngs Data
quality qc written 5.9 years ago by Ido Tamir4.8k • updated 5.9 years ago by Obi Griffith16k
8
votes
2
answers
6.1k
views
2
answers
13
votes
2
answers
444
views
7 follow
2
answers
12
votes
4
answers
5.9k
views
6 follow
4
answers
Looking For Reliable Tools To Do Quality Filtering Of Fastq Files
fastq qc written 5.5 years ago by dataminer8950 • updated 5.5 years ago by Madelaine Gogol4.9k
8
votes
1
answer
1.6k
views
1
answer
How To Handle Ns In The Middle Of Reads
qc fastqc written 4.1 years ago by kautilya350 • updated 2.9 years ago by Gabriel R.2.2k
6
votes
1
answer
988
views
1
answer
2-3 Example Datasets (References) With Known Variants?
exome variant qc written 6.0 years ago by Angel190 • updated 5.9 years ago by Pascal1.4k
3
votes
0
answers
1.4k
views
0
answers
7
votes
2
answers
5.3k
views
5 follow
2
answers
Ribosomal Intervals For Collectrnaseqmetrics
picard qc rna-seq written 4.9 years ago by Johan770 • updated 3.2 years ago by Kamil1.8k
20
votes
3
answers
4.5k
views
7 follow
3
answers
Transition/Transversion Ratio From Fastq Files
fastq fastqc exome-sequencing qc exome qualitycontrol written 4.7 years ago by venkateshr89680 • updated 4.6 years ago by rob234king550
7
votes
1
answer
2.7k
views
1
answer
Low transition/transversion ratio: alignment or caller problem?
vcf somatic qc whole genome written 3.7 years ago by DoubleD130 • updated 3.7 years ago by Cyriac Kandoth4.8k
3
votes
1
answer
1.1k
views
1
answer
Qc Of A New Study Sample In A Cost-Effective Way
array qc snp genotyping written 6.3 years ago by Thomas720 • updated 6.1 years ago by Matt Shirley8.2k
3
votes
1
answer
1.1k
views
1
answer
Seq Qc/Trimming Code Preferences?
qc trimming next-gen rna written 6.2 years ago by Holly30 • updated 6.1 years ago by Chris Penkett470
3
votes
1
answer
2.8k
views
1
answer
Picard Bait And Target Sequences For Hybrid Selection Metrics
exome picard qc written 6.0 years ago by Dan D6.3k • updated 6.0 years ago by Sean Davis24k
3
votes
1
answer
1.9k
views
1
answer
3
votes
2
answers
2.7k
views
2
answers
4
votes
1
answer
2.0k
views
1
answer
Qualimap Settings For A Very Large Bam, Chunk Size And Number Of Windows
bam qc written 5.0 years ago by William4.1k • updated 4.8 years ago by Fennan30
9
votes
6
answers
3.7k
views
7 follow
6
answers
Illumina Mate Pair Read Duplication Level
illumina qc written 4.7 years ago by abc40 • updated 4.4 years ago by Biomonika (Noolean)3.0k
3
votes
1
answer
2.9k
views
1
answer
Rna-Seq Read Mapping Stats/Metrics
alignment qc rna-seq written 4.6 years ago by pm201350 • updated 4.6 years ago by Mikael Huss4.6k
3
votes
0
answers
2.1k
views
0
answers
8
votes
3
answers
2.9k
views
3
answers
LD pruning and other QC before association analysis ?
gwas qc written 22 months ago by Picasa320 • updated 21 months ago by Nick30
2
votes
0
answers
709
views
0
answers
9
votes
4
answers
5.0k
views
4
answers
Is Paired End analysis possible with FASTQC?
paired-end dna-seq qc fastqc written 21 months ago by chefarov80 • updated 10 days ago by Stephane Plaisance350
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