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10
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Quality control & Processing of RNA seq data
quality control rna-seq written 3.5 years ago by David_emir • 280 • updated 22 days ago by Biostar ♦♦ 20
2
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0
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240
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0
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Isn't fastq file header suppose to have barcode sequence?
quality control chip-seq written 4 months ago by salamandra • 130 • updated 10 weeks ago by Biostar ♦♦ 20
8
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1
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631
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5 follow
1
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fastqc adapter content
sequencing quality control fastqc written 4 months ago by prasundutta87 • 170 • updated 4 months ago by genomax ♦ 49k
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4
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4
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Tool: AfterQC: Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
fastq tool afterqc polyg filtering quality control written 2.1 years ago by chen • 1.6k • updated 5 months ago by zhimenggan • 0
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News: Upcoming Hands-On NGS Data Analysis Workshops 2018
dna-seq news mapping rna-seq quality control workshop written 6 months ago by David Langenberger ♦ 8.1k
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216
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"ChAMP" package quality controls
R quality control packages champ written 7 months ago by niutster • 60
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465
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Evaluation of RSeQC report
rseqc quality control rna-seq bam_stat.py written 7 months ago by fawazfebin • 0 • updated 7 months ago by Kevin Blighe ♦ 21k
0
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324
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is necessary to remove TruSeq index adapter with low percent and present in one read?
adapters paired-end quality control rna-seq written 8 months ago by Lila M • 380
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359
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arrayanalysis.org custom CDF version
pre-processing quality control microarray written 8 months ago by tleona3 • 10
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8 follow
5
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RNA-SeQC error no output
quality control tool rna-seq written 4.0 years ago by Parimala Devi • 30 • updated 9 months ago by Isaac C. Joseph • 40
0
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1
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412
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1
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How to see what percentage of reads remain after quality filter to a certain phred score
quality control phred rna-seq fastqc written 11 months ago by nikelle.petrillo • 80
1
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0
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429
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cross strand correlation in BrU-UV ChIP data
quality control chip-seq written 14 months ago by mforde84 • 1.1k
0
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389
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sequences data QC
sequence quality control written 14 months ago by chengyi31000 • 0
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2
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725
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5 follow
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New to all of this: Getting phred score from fast Q
phredscore quality control written 17 months ago by penac3 • 0 • updated 17 months ago by harold.smith.tarheel • 4.1k
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News: Webinar: Detailed understanding of NGS quality control and file formats
file format fastqc news ngs quality control sangenix written 18 months ago by Persistent LABS • 740
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Minor Allele Frequency in PLINK
array maf quality control plink filtering written 20 months ago by Simo • 30
0
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how to exclude/include microarray chip based on pseudo-images?
affy microarray quality control written 24 months ago by peter pfand • 70
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Understanding Trimmomatic Sliding Window Approach
trimmomatic quality control qc rna-seq written 2.1 years ago by nikelle.petrillo • 80 • updated 2.1 years ago by biomaster • 180
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How do you remove coverage outliers in sequencing count data?
R quality control qc bisulfite sequencing written 2.2 years ago by biohack92 • 130 • updated 2.2 years ago by dariober ♦ 9.2k
2
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FastQC: Interesting tile quality in paired-end Illumina RNA-seq data
illumina quality control rna-seq fastqc written 2.3 years ago by jth • 190 • updated 2.3 years ago by Istvan Albert ♦♦ 77k
5
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Automating pre-alignment (and post-alignment) quality control
quality control rna-seq fastqc written 2.4 years ago by umn_bist • 310 • updated 2.4 years ago by harold.smith.tarheel • 4.1k
1
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quality control on different snp chips
gwas quality control snp chips genotyping written 2.7 years ago by avari • 70 • updated 2.6 years ago by vassialk • 150
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1
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1.3k
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1
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What to do with outliers from Microarray quality control?
bioconductor quality control outliers microarrays written 2.7 years ago by peter pfand • 70 • updated 2.7 years ago by svlachavas • 450
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1
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What Quality Control software should i use?
ngs quality control written 2.8 years ago by bondcarbond • 0 • updated 2.8 years ago by thackl • 2.5k
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FastQC quality control graphics for publication?
quality control tool fastqc written 2.8 years ago by bondcarbond • 0 • updated 2.8 years ago by Matt Shirley ♦ 8.4k
22
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4
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10k
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10 follow
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Run multiple fastq.gz files with FastQC and yield single report?
fastqc quality control sequencing written 2.9 years ago by pbigbig • 190 • updated 2.9 years ago by James Ashmore • 2.4k
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1.7k
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DNA multiple sequence alignment quality check software advise
quality check quality control msa dna written 3.0 years ago by cara78 • 10 • updated 3.0 years ago by Brice Sarver • 2.4k
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Tool: ChIPQC: a package for assessing quality of ChIP-seq samples and experiments
quality assessment quality control chip-seq tool written 4.2 years ago by Rory Stark • 460 • updated 3.3 years ago by Ming Tang • 2.3k
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