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<prev • 131 results • page 1 of 5 • next >
2
votes
1
answer
139
views
1
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Import the quality scores from a FASTQ file in Python 3 Biopython
fasta python3 fastq biopython quality written 16 days ago by cristian • 80 • updated 16 days ago by Vijay Lakhujani • 1.2k
4
votes
1
answer
355
views
1
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Minimum length of reads
reads processing ngs trimming quality written 6 weeks ago by deepti1rao • 0
88
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5
answers
1.1k
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18 follow
5
answers
Forum: Declining quality of biostars
quality forum written 12 weeks ago by mforde84 • 900 • updated 11 weeks ago by Charles Plessy • 2.2k
0
votes
2
answers
195
views
2
answers
How to measure the quality of a predicted protein?
quality prediction protein written 12 weeks ago by l.souza • 50 • updated 12 weeks ago by jrj.healey • 2.5k
1
vote
0
answers
179
views
0
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What's the difference between Unaligned and Unmatched in rnaQUAST output?
assembly quality rna-seq rnaquast written 3 months ago by lcsousapaula • 10
3
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2
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196
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2
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Publication-Quality Multiple Sequence Alignment
image graphics quality msa publication written 3 months ago by l.souza • 50
2
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0
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175
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0
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What could be the best explanation for a dip in phred quality score at the near beginning of reads?
trimmomatic illumina quality phred fastqc written 3 months ago by Vijay Lakhujani • 1.2k
3
votes
1
answer
300
views
1
answer
FastQC and adapters
adapters quality sequence sequencing written 4 months ago by ognjen011 • 40 • updated 4 months ago by mastal511 • 1.7k
8
votes
1
answer
391
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6 follow
1
answer
MiSeq reagent kit version 3 : bad reads qualities
illumina quality miseq phred fastqt written 5 months ago by sacha • 800 • updated 5 months ago by h.mon ♦ 8.7k
3
votes
1
answer
416
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1
answer
How to clean bad tiles from Illumina reads?
illumina quality rna-seq trim fastqc written 7 months ago by blazer9191 • 0 • updated 7 months ago by harold.smith.tarheel • 3.8k
0
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0
answers
601
views
0
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What is genotype quality scale?
varscan quality genotype written 9 months ago by agata88 • 610
3
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2
answers
2.6k
views
2
answers
Tool: Chance: Comprehensive Software For Quality Control And Validation Of Chip-Seq Data
chip-seq quality next-gen qc tool written 4.9 years ago by Aaron Diaz • 20 • updated 13 months ago by paul.e.gradie • 60
0
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0
answers
379
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0
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Abnormal coverage profile
quality qualimap rna-seq rna degradation written 14 months ago by Gary • 410
19
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0
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4.9k
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9 follow
0
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Tool: Quast Is A Convenient Tool For Assembly Evaluation
assembly quality tool written 4.6 years ago by Nikolay Vyahhi • 1.1k • updated 15 months ago by Vijay Lakhujani • 1.2k
0
votes
1
answer
563
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1
answer
GATK Mapping quality value
gatk quality map written 15 months ago by kritika1424 • 70 • updated 15 months ago by Pierre Lindenbaum ♦ 98k
4
votes
2
answers
1.1k
views
2
answers
reduced quality in a paired-end R2 reads
qc quality chip-seq rna-seq fastqc written 15 months ago by Assa Yeroslaviz • 1.1k • updated 15 months ago by Brian Bushnell ♦ 14k
0
votes
2
answers
534
views
2
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Galaxy NGS Tutorial (Stuck at a point)
ngs galaxy quality workshop rna-seq written 16 months ago by pablosolar.r • 20
3
votes
2
answers
438
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2
answers
Data from the sequencing of the whole genome with LOW quality.
genome sra quality next-gen sequencing written 17 months ago by mieszko91 • 30 • updated 17 months ago by jotan • 1.1k
0
votes
0
answers
488
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0
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Pick highest quality fastq reads
filter fastq quality written 18 months ago by Biomonika (Noolean) ♦ 3.0k
0
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0
answers
1.1k
views
0
answers
ASCII conversion from bam file
quality ascii written 2.9 years ago by fedulka • 60 • updated 18 months ago by Biostar ♦♦ 20
6
votes
2
answers
681
views
2
answers
How to plot a histogram for billions of genotype quality values?
vcf R quality python written 18 months ago by William • 3.9k • updated 18 months ago by biocyberman • 640
9
votes
1
answer
1.6k
views
1
answer
Illumina X ten samples have phred scores out of range [0,41]
sequencing quality next-gen phred-encoding written 19 months ago by Wai Yi Leung • 30 • updated 19 months ago by Dan D ♦ 6.2k
0
votes
2
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704
views
2
answers
Generating Read Length?
quality phred rna-seq read length written 20 months ago by nikelle.petrillo • 70 • updated 20 months ago by Chris Miller ♦ 18k
11
votes
2
answers
2.9k
views
2
answers
FreeBayes vs GATK's HaplotypeCaller
vcf gatk quality freebayes variant caller written 20 months ago by Hatem Elshazly • 50 • updated 20 months ago by Carlos Borroto • 1.5k
2
votes
1
answer
2.0k
views
1
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What are the cut-offs during read quality filtering in Bowtie/TopHat before mapping?
tophat quality rna-seq filtering bowtie written 2.5 years ago by glados • 20 • updated 20 months ago by dbrowne.up • 60
0
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1
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535
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1
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Is there any program for automatically assess multialignment
quality multialignment clustal omega assess written 21 months ago by siso • 10 • updated 21 months ago by dendrov.kan • 10
2
votes
1
answer
602
views
1
answer
quality trimming before muTect?
trimming mutect quality snp written 22 months ago by jona • 10
1
vote
1
answer
591
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1
answer
question about a published figure
quality figure chip-seq written 22 months ago by rob.costa1234 • 110 • updated 22 months ago by Devon Ryan ♦ 70k
3
votes
1
answer
5.5k
views
1
answer
What Is The Minimum Quality Score
fastq fastx quality written 5.8 years ago by Love • 100 • updated 22 months ago by Biostar ♦♦ 20
0
votes
1
answer
692
views
1
answer
Question about RNA-seq and chipseq quality table/ fig
rnaseq chipseq quality coverage written 23 months ago by kanwarjag • 770 • updated 23 months ago by Kamil • 1.6k
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