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<prev • 141 results • page 1 of 5 • next >
75
votes
9
answers
17k
views
28 follow
9
answers
How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
assembly quality next-gen written 5.5 years ago by diltsjeri • 410 • updated 18 days ago by alslonik • 20
3
votes
2
answers
147
views
2
answers
Difference between marking duplicates and filtering BAM on phred score
duplicates next-gen picard quality alignment written 5 weeks ago by Nalini • 10 • updated 5 weeks ago by d-cameron • 1.8k
4
votes
1
answer
147
views
1
answer
Microarray Probesets Quality Control - Why exclude non-autosomal probesets?
control quality autosomes microarray probesets written 5 weeks ago by Volka • 10 • updated 5 weeks ago by Devon Ryan ♦ 81k
1
vote
1
answer
141
views
1
answer
Per tail sequence quality fail
quality tile fastqc written 6 weeks ago by bwczech • 0 • updated 6 weeks ago by Devon Ryan ♦ 81k
1
vote
2
answers
117
views
2
answers
Removal of non quality read in fastq file
fastq quality written 7 weeks ago by akbioinfo14 • 0 • updated 7 weeks ago by Bastien Hervé • 1.5k
0
votes
1
answer
146
views
1
answer
Decreased base quality at start of RNA seq reads
base quality position rna-seq sequencing written 7 weeks ago by brismiller • 10 • updated 7 weeks ago by Wietje • 150
0
votes
0
answers
146
views
0
answers
Per base sequence quality and per base N content
quality fastqc written 8 weeks ago by bwczech • 0
2
votes
1
answer
330
views
1
answer
Is there any alternative to QUAST software to evaluate de novo assembly results?
assembly quality evaluation quast written 5 months ago by oxfordsoccer • 10 • updated 5 months ago by Sej Modha ♦ 3.1k
1
vote
1
answer
275
views
1
answer
Opinion on Quality basecall threshold to use
vcf filter quality qual written 7 months ago by ricfoz • 20
0
votes
0
answers
348
views
0
answers
How to improve alignment quality of ChIP-seq for single-end
bowtie2 quality alignment chip-seq single-end written 7 months ago by jule • 0
0
votes
0
answers
266
views
0
answers
Quality controls with plink
controls quality plink written 7 months ago by vgenepi • 0
2
votes
1
answer
616
views
1
answer
Import the quality scores from a FASTQ file in Python 3 Biopython
fasta python3 fastq biopython quality written 10 months ago by cristian • 110 • updated 10 months ago by Vijay Lakhujani ♦ 2.8k
4
votes
1
answer
819
views
1
answer
Minimum length of reads
reads processing ngs trimming quality written 11 months ago by deepti1rao • 0
88
votes
5
answers
1.6k
views
18 follow
5
answers
Forum: Declining quality of biostars
quality forum written 12 months ago by mforde84 • 1.2k • updated 12 months ago by Charles Plessy • 2.5k
0
votes
2
answers
416
views
2
answers
How to measure the quality of a predicted protein?
quality prediction protein written 13 months ago by l.souza • 60 • updated 12 months ago by jrj.healey • 5.0k
1
vote
0
answers
347
views
0
answers
What's the difference between Unaligned and Unmatched in rnaQUAST output?
assembly quality rna-seq rnaquast written 13 months ago by lcsousapaula • 10
3
votes
2
answers
825
views
2
answers
Publication-Quality Multiple Sequence Alignment
image graphics quality msa publication written 13 months ago by l.souza • 60
2
votes
0
answers
414
views
0
answers
What could be the best explanation for a dip in phred quality score at the near beginning of reads?
trimmomatic illumina quality phred fastqc written 13 months ago by Vijay Lakhujani ♦ 2.8k
3
votes
1
answer
675
views
1
answer
FastQC and adapters
adapters quality sequence sequencing written 14 months ago by ognjen011 • 150 • updated 14 months ago by mastal511 • 1.9k
8
votes
1
answer
1.4k
views
6 follow
1
answer
MiSeq reagent kit version 3 : bad reads qualities
illumina quality miseq phred fastqt written 15 months ago by sacha • 1.3k • updated 15 months ago by h.mon ♦ 16k
3
votes
1
answer
988
views
1
answer
How to clean bad tiles from Illumina reads?
illumina quality rna-seq trim fastqc written 17 months ago by blazer9191 • 0 • updated 17 months ago by harold.smith.tarheel • 4.1k
1
vote
0
answers
1.1k
views
0
answers
What is genotype quality scale?
varscan quality genotype written 19 months ago by agata88 • 670
3
votes
2
answers
2.8k
views
2
answers
Tool: Chance: Comprehensive Software For Quality Control And Validation Of Chip-Seq Data
chip-seq quality next-gen qc tool written 5.7 years ago by Aaron Diaz • 20 • updated 23 months ago by paul.e.gradie • 80
0
votes
0
answers
547
views
0
answers
Abnormal coverage profile
quality qualimap rna-seq rna degradation written 2.0 years ago by Gary • 440
23
votes
0
answers
5.8k
views
13 follow
0
answers
Tool: Quast Is A Convenient Tool For Assembly Evaluation
assembly quality tool written 5.4 years ago by Nikolay Vyahhi • 1.1k • updated 2.1 years ago by Vijay Lakhujani ♦ 2.8k
0
votes
1
answer
876
views
1
answer
GATK Mapping quality value
gatk quality map written 2.1 years ago by Kritika • 250 • updated 2.1 years ago by Pierre Lindenbaum ♦ 110k
4
votes
2
answers
1.9k
views
2
answers
reduced quality in a paired-end R2 reads
qc quality chip-seq rna-seq fastqc written 2.1 years ago by Assa Yeroslaviz • 1.1k • updated 2.1 years ago by Brian Bushnell ♦ 15k
0
votes
2
answers
871
views
2
answers
Galaxy NGS Tutorial (Stuck at a point)
ngs galaxy quality workshop rna-seq written 2.1 years ago by pablosolar.r • 20
3
votes
2
answers
663
views
2
answers
Data from the sequencing of the whole genome with LOW quality.
genome sra quality next-gen sequencing written 2.2 years ago by mieszko91 • 30 • updated 2.2 years ago by jotan • 1.2k
0
votes
0
answers
720
views
0
answers
Pick highest quality fastq reads
filter fastq quality written 2.3 years ago by Biomonika (Noolean) ♦ 3.0k
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