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Alignment Software To Only Find Number Of Short Read Alignments?
short read alignment written 7.1 years ago by Click downvote670 • updated 12 weeks ago by Biostar ♦♦ 20
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Samtools Read Coverage At Bp And Call % At Each Base
read samtools coverage written 7.7 years ago by diltsjeri440 • updated 5 months ago by ATpoint30k
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Problem to Read my file : infinite loop
python infinite loop file read written 8 months ago by amandinelecerfdefer20 • updated 8 months ago by WouterDeCoster43k
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CIGAR operations performed according to strand or to read?
sequencing read format sam cigar written 2.2 years ago by Macspider3.0k • updated 10 months ago by shouldsee.gem0
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bowtie2 error: Read .... has more quality values than read characters.
assembly bowtie2 error read written 17 months ago by c.clarido50 • updated 15 months ago by Biostar ♦♦ 20
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5 follow
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939
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Showing the original subject when running BLAST
command read alignment blast dna written 4.0 years ago by kdsilva0 • updated 17 months ago by RamRS25k
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6 follow
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Finding some specific SNPs in aligned sam file
sam file read snp written 18 months ago by hasani.iut640 • updated 18 months ago by Benn7.9k
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Cases where indexing is efficient for read retrieval
read fastq speed database index written 4.6 years ago by blaise.li__biostars50 • updated 19 months ago by Biostar ♦♦ 20
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5 follow
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Does Bam File Include Unmapped Reads As Well?
read bam mapping written 7.0 years ago by Jordan1.1k • updated 19 months ago by ammar.husami0
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8 follow
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Normalization of read counts
read counts written 21 months ago by dllopezr60
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How to check if a read in a SAM file contains substitutions
read bam sam c++ written 23 months ago by omariqbal20170 • updated 23 months ago by d-cameron2.1k
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Does each read in a BAM file have approximately the same size?
read bam size written 2.0 years ago by Aleksandra0 • updated 2.0 years ago by grant.hovhannisyan1.9k
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16 follow
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Forward Strand Or Reverse Strand
read strand written 7.2 years ago by siyu130 • updated 2.2 years ago by h.mon29k
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6 follow
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1.9k
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What Do Marked Reads Mean In An Xsq File?
read solid written 7.1 years ago by Jordan1.1k • updated 2.3 years ago by Biostar ♦♦ 20
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19 follow
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Tracking Reads/Contigs In Velvet
read velvet written 8.4 years ago by Abhi1.5k • updated 2.5 years ago by Biostar ♦♦ 20
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Modification of fastq header
read fastq header modification written 2.9 years ago by seta1.2k • updated 2.9 years ago by Charles Plessy2.7k
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7 follow
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NGS overlapping reads
read ngs alignment read-depth rna-seq written 3.0 years ago by xd_d90 • updated 3.0 years ago by d-cameron2.1k
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7 follow
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Remove Duplicate Reads From Fasta File
fasta read written 7.4 years ago by deepthithomaskannan320 • updated 3.0 years ago by Eslam Samir100
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how to write some sequences in a (.fq)-like file?
write R writexstringset io read written 3.1 years ago by Amirosein70 • updated 3.1 years ago by mforde841.2k
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Is it possible to get a merged fasta/fastq reads from a bam file?
read merge bam written 4.4 years ago by a.s.c0 • updated 3.2 years ago by Biostar ♦♦ 20
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