Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: read • reset
or   Classic search
<prev • 144 results • page 1 of 5 • next >
4
votes
1
answer
208
views
1
answer
bowtie2 error: Read .... has more quality values than read characters.
assembly bowtie2 error read written 10 weeks ago by c.clarido • 40 • updated 5 weeks ago by Biostar ♦♦ 20
2
votes
1
answer
480
views
5 follow
1
answer
is there any fast and accurate read mapper which provides an easy-to-use API?
read alignment written 9 months ago by Amirosein • 70
1
vote
0
answers
688
views
0
answers
Showing the original subject when running BLAST
command read alignment blast dna written 2.8 years ago by kdsilva • 0 • updated 11 weeks ago by RamRS ♦ 19k
6
votes
1
answer
267
views
6 follow
1
answer
Finding some specific SNPs in aligned sam file
sam file read snp written 3 months ago by hasani.iut6 • 40 • updated 3 months ago by b.nota ♦ 5.4k
9
votes
4
answers
977
views
4
answers
Cases where indexing is efficient for read retrieval
read fastq speed database index written 3.4 years ago by blaise.li__biostars • 50 • updated 4 months ago by Biostar ♦♦ 20
2
votes
3
answers
4.2k
views
5 follow
3
answers
Does Bam File Include Unmapped Reads As Well?
read bam mapping written 5.8 years ago by Jordan • 1.1k • updated 5 months ago by ammar.husami • 0
10
votes
1
answer
1.0k
views
8 follow
1
answer
What's a good PacBio CLR read simulator?
read simulator written 22 months ago by pmarijon • 120
1
vote
0
answers
235
views
0
answers
Normalization of read counts
read counts written 7 months ago by dllopezr • 40
5
votes
2
answers
313
views
2
answers
How to check if a read in a SAM file contains substitutions
read bam sam c++ written 8 months ago by omariqbal2017 • 0 • updated 8 months ago by d-cameron • 1.9k
6
votes
1
answer
277
views
1
answer
Does each read in a BAM file have approximately the same size?
read bam size written 9 months ago by Aleksandra • 0 • updated 9 months ago by grant.hovhannisyan • 1.3k
33
votes
3
answers
14k
views
16 follow
3
answers
Forward Strand Or Reverse Strand
read strand written 6.0 years ago by siyu • 130 • updated 12 months ago by h.mon ♦ 21k
4
votes
1
answer
501
views
1
answer
CIGAR operations performed according to strand or to read?
sequencing read format sam cigar written 12 months ago by Macspider • 2.6k • updated 12 months ago by h.mon ♦ 21k
2
votes
0
answers
536
views
6 follow
0
answers
How to write a program in Perl that read a FASTQ file? after then, there is a method to convert the quality score from ASCII to numeric?
perl read fastq ascii quality score written 12 months ago by prototommaso • 0
2
votes
2
answers
1.6k
views
2
answers
What Do Marked Reads Mean In An Xsq File?
read solid written 5.9 years ago by Jordan • 1.1k • updated 13 months ago by Biostar ♦♦ 20
27
votes
2
answers
6.9k
views
19 follow
2
answers
Tool: Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads.
trimmer read trimming qc tool written 4.5 years ago by Malachi Griffith ♦ 17k • updated 13 months ago by anu014 • 160
0
votes
0
answers
345
views
0
answers
count of reads having multiple references
read alignment multiple references written 14 months ago by vmicrobio • 230
0
votes
0
answers
469
views
0
answers
Set percent identity and percent length covered in HISAT2 mapping
read hisat2 mapping genomics sequencing written 15 months ago by O.rka • 70
6
votes
2
answers
3.1k
views
2
answers
Tracking Reads/Contigs In Velvet
read velvet written 7.2 years ago by Abhi • 1.5k • updated 15 months ago by Biostar ♦♦ 20
0
votes
0
answers
1.3k
views
0
answers
FastX Collapser and duplicate removal
read ngs fastx collapser duplicate written 19 months ago by seta • 1.1k
0
votes
2
answers
691
views
5 follow
2
answers
Modification of fastq header
read fastq header modification written 20 months ago by seta • 1.1k • updated 20 months ago by Charles Plessy • 2.6k
4
votes
2
answers
1.2k
views
7 follow
2
answers
NGS overlapping reads
read ngs alignment read-depth rna-seq written 21 months ago by xd_d • 90 • updated 21 months ago by d-cameron • 1.9k
3
votes
3
answers
6.1k
views
7 follow
3
answers
Remove Duplicate Reads From Fasta File
fasta read written 6.2 years ago by deepthithomaskannan • 250 • updated 22 months ago by Eslam Samir • 100
0
votes
0
answers
646
views
0
answers
How to identify read depth from maf files?
maf read sequencing depth written 22 months ago by omd • 10
1
vote
1
answer
671
views
1
answer
how to write some sequences in a (.fq)-like file?
write R writexstringset io read written 23 months ago by Amirosein • 70 • updated 23 months ago by mforde84 • 1.2k
2
votes
2
answers
1.1k
views
2
answers
Is it possible to get a merged fasta/fastq reads from a bam file?
read merge bam written 3.2 years ago by a.s.c • 0 • updated 23 months ago by Biostar ♦♦ 20
20
votes
2
answers
12k
views
9 follow
2
answers
What Is Ad (Allelic Depth) In 1000Genomes Vcf?
genome read allele written 7.9 years ago by Chronos • 550 • updated 2.0 years ago by anderspitman • 50
3
votes
1
answer
1.9k
views
1
answer
Quick method for calculating mean and standard deviation of read coverage of a chromosome.
fast read read depth\ coverage quick written 4.4 years ago by QVINTVS_FABIVS_MAXIMVS • 2.2k • updated 2.5 years ago by Biostar ♦♦ 20
7
votes
1
answer
2.9k
views
1
answer
Hisat2 on multiple paired-end input
genome read rna-seq isoform sequencing written 2.6 years ago by dovah • 30 • updated 2.6 years ago by Devon Ryan ♦ 86k
2
votes
0
answers
2.5k
views
0
answers
Reads, Cluster Numbers, Study Design Comparison
read cluster number written 2.8 years ago by carabiniero8 • 10
0
votes
1
answer
1.1k
views
1
answer
How many reads used by a assembler for transcriptome assembly
read rna-seq transcriptome assembly written 3.0 years ago by seta • 1.1k • updated 3.0 years ago by Antonio R. Franco • 3.9k
<prev • 144 results • page 1 of 5 • next >
Recent Votes
Recent Locations • All »
  • France/Nantes/Institut du Thorax - INSERM UMR1087, just now
  • United States, just now
  • United States, 2 minutes ago
  • United States, 4 minutes ago
  • UK, U. Glasgow, 5 minutes ago
  • St. Louis, MO, 6 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1115 users visited in the last hour