Showing: readreset
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9
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4
answers
870
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4
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Cases where indexing is efficient for read retrieval
read fastq speed database index written 3.1 years ago by blaise.li__biostars40 • updated 23 days ago by Biostar ♦♦ 20
2
votes
3
answers
3.9k
views
5 follow
3
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Does Bam File Include Unmapped Reads As Well?
read bam mapping written 5.4 years ago by Jordan1.0k • updated 5 weeks ago by ammar.husami0
9
votes
1
answer
843
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8 follow
1
answer
1
vote
0
answers
178
views
0
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Normalization of read counts
read counts written 3 months ago by dllopezr20
5
votes
2
answers
205
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2
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How to check if a read in a SAM file contains substitutions
read bam sam c++ written 4 months ago by omariqbal20170 • updated 4 months ago by d-cameron1.9k
6
votes
1
answer
204
views
1
answer
Does each read in a BAM file have approximately the same size?
read bam size written 5 months ago by Aleksandra0 • updated 5 months ago by grant.hovhannisyan950
2
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1
answer
326
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5 follow
1
answer
30
votes
3
answers
13k
views
16 follow
3
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Forward Strand Or Reverse Strand
read strand written 5.7 years ago by siyu120 • updated 8 months ago by h.mon18k
4
votes
1
answer
364
views
1
answer
CIGAR operations performed according to strand or to read?
sequencing read format sam cigar written 8 months ago by Macspider2.5k • updated 8 months ago by h.mon18k
2
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0
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405
views
6 follow
0
answers
2
votes
2
answers
1.6k
views
2
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What Do Marked Reads Mean In An Xsq File?
read solid written 5.5 years ago by Jordan1.0k • updated 9 months ago by Biostar ♦♦ 20
27
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2
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6.6k
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19 follow
2
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0
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0
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280
views
0
answers
0
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0
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398
views
0
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6
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2
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3.0k
views
2
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Tracking Reads/Contigs In Velvet
read velvet written 6.9 years ago by Abhi1.5k • updated 11 months ago by Biostar ♦♦ 20
0
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0
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1.0k
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0
answers
0
votes
2
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502
views
5 follow
2
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Modification of fastq header
read fastq header modification written 16 months ago by seta1000 • updated 16 months ago by Charles Plessy2.5k
4
votes
2
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759
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7 follow
2
answers
NGS overlapping reads
read ngs alignment read-depth rna-seq written 17 months ago by xd_d90 • updated 17 months ago by d-cameron1.9k
3
votes
3
answers
5.7k
views
7 follow
3
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Remove Duplicate Reads From Fasta File
fasta read written 5.9 years ago by deepthithomaskannan230 • updated 18 months ago by Eslam Samir100
0
votes
0
answers
565
views
0
answers
1
vote
1
answer
582
views
1
answer
how to write some sequences in a (.fq)-like file?
write R writexstringset io read written 19 months ago by Ameerosein70 • updated 19 months ago by mforde841.2k
2
votes
2
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1.0k
views
2
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Is it possible to get a merged fasta/fastq reads from a bam file?
read merge bam written 2.8 years ago by a.s.c0 • updated 19 months ago by Biostar ♦♦ 20
17
votes
2
answers
11k
views
7 follow
2
answers
What Is Ad (Allelic Depth) In 1000Genomes Vcf?
genome read allele written 7.5 years ago by Chronos530 • updated 20 months ago by anderspitman40
3
votes
1
answer
1.8k
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1
answer
7
votes
1
answer
2.6k
views
1
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Hisat2 on multiple paired-end input
genome read rna-seq isoform sequencing written 2.3 years ago by dovah30 • updated 2.3 years ago by Devon Ryan82k
1
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0
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613
views
0
answers
2
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0
answers
2.0k
views
0
answers
0
votes
1
answer
1.0k
views
1
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How many reads used by a assembler for transcriptome assembly
read rna-seq transcriptome assembly written 2.7 years ago by seta1000 • updated 2.7 years ago by Antonio R. Franco3.7k
18
votes
4
answers
3.1k
views
7 follow
4
answers
Help Me Understand Why So Many Reads Do Not Align!
read tophat alignment written 7.4 years ago by Pfs30 • updated 2.8 years ago by Biostar ♦♦ 20
10
votes
3
answers
2.2k
views
3
answers
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