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39
votes
9
answers
40k
views
15 follow
9
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How to count fastq reads
reads sequence fastq next-gen written 5.0 years ago by Chenglin130 • updated 7 days ago by sbwiecko10
6
votes
3
answers
202
views
3
answers
Downloading SRA data
reads sra metagenomics written 26 days ago by anabaena0 • updated 26 days ago by liorglic280
4
votes
4
answers
2.6k
views
4
answers
Reads Simulation and Read Simulator
reads simulator simulation ngs written 4.0 years ago by midox260 • updated 6 weeks ago by onestop_data200
1
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0
answers
88
views
0
answers
2
votes
0
answers
145
views
0
answers
Finding gene matches using sequence reads?
reads bowtie2 metagenomic written 7 weeks ago by anabaena0 • updated 7 weeks ago by Fatima560
1
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1
answer
151
views
1
answer
3
votes
1
answer
193
views
1
answer
1
vote
1
answer
569
views
5 follow
1
answer
1
vote
0
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161
views
0
answers
3
votes
1
answer
185
views
1
answer
0
votes
1
answer
311
views
1
answer
Difference between Pysam Pileup and Fetch
reads bam pysam pileup written 6 months ago by aalith10 • updated 4 months ago by castaway19900
6
votes
2
answers
295
views
2
answers
Subset Fastq file from list of read numbers
reads fastq subset written 4 months ago by johnsonn5730 • updated 4 months ago by Pierre Lindenbaum127k
1
vote
1
answer
164
views
1
answer
The Picard FilterSAM READ is throwing error
reads assembly picard rna-seq written 4 months ago by a.james210 • updated 4 months ago by Pierre Lindenbaum127k
5
votes
1
answer
293
views
1
answer
Sampling random reads from BAM files with allowing same reads
reads bam samtools random_sampling written 5 months ago by SSK10 • updated 5 months ago by benformatics1.5k
1
vote
1
answer
217
views
1
answer
0
votes
0
answers
1.4k
views
0
answers
Prioritizing Fusion Based On Tophat Result
reads fusion tophat written 6.7 years ago by Angel210 • updated 5 months ago by Biostar ♦♦ 20
1
vote
0
answers
282
views
0
answers
0
votes
0
answers
295
views
0
answers
7
votes
2
answers
1.3k
views
2
answers
Simulating Bacterial Population
reads population simulate bacterial written 3.8 years ago by Sama60 • updated 6 months ago by Biostar ♦♦ 20
0
votes
1
answer
187
views
1
answer
0
votes
1
answer
350
views
1
answer
concatenating FASTQ forward and reverse reads in Snakemake
reads fastq forward concatenate bash written 6 months ago by Hansen_86920 • updated 6 months ago by Eric Lim1.6k
2
votes
0
answers
262
views
0
answers
2
votes
1
answer
266
views
1
answer
In the reformat tool of BBmap what is the meaning of Read1_linear and Read1_log
reads quality bbmap written 6 months ago by Joseph Hughes2.8k • updated 6 months ago by h.mon29k
0
votes
0
answers
1.3k
views
0
answers
Sequence read (id) specific kmer frequency calculation
reads kmer sequence metagenome written 4.4 years ago by arif.at.iut0 • updated 7 months ago by Biostar ♦♦ 20
14
votes
3
answers
487
views
7 follow
3
answers
Read length for metagenomics analysis
gene assembly reads metagenomic written 8 months ago by magnuskerber10 • updated 8 months ago by Buffo1.8k
0
votes
0
answers
371
views
0
answers
10
votes
4
answers
10k
views
13 follow
4
answers
How To Count The Reads Mapped To Exon And Exon-Exon Junctions?
reads gff exon sam bam written 6.8 years ago by lwc628210 • updated 9 months ago by m131131537810
5
votes
0
answers
829
views
5 follow
0
answers
How to extract reads which contain specific sequence from fastq file
reads fastq extract written 10 months ago by hsu10 • updated 10 months ago by WouterDeCoster43k
0
votes
0
answers
283
views
0
answers
0
votes
0
answers
351
views
0
answers
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