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<prev • 122 results • page 1 of 5 • next >
2
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171
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What is the acceptable percentage of reads with adapters sequenced in miRNA sequencing?
adapters reads smallrna rna-seq mirna written 13 days ago by bioinforesearchquestions • 90
2
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0
answers
128
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0
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CRISPR screening analysis using mageck
crispr reads mageck screening written 26 days ago by runnerbio88 • 70
2
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0
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175
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5 follow
0
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Tips for increasing metaSPAdes assembly speed for 7 billion reads?
reads assembly metaspades spades metagenome written 5 weeks ago by anin.gregory • 70
0
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0
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204
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0
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Normalization of NGS data to make CNV calls
reads R ngs cnv normalization written 5 weeks ago by caspase8mach • 0
4
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0
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249
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0
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Trimming adapters with custom scoring
reads sequence fastq alignment adapter written 6 weeks ago by aka001 • 160
0
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1
answer
205
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1
answer
Low quality of reads in reverse files toward the last bases
reads illumina quality scores written 6 weeks ago by deepti1rao • 0 • updated 6 weeks ago by Devon Ryan ♦ 71k
4
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1
answer
358
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1
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Minimum length of reads
reads processing ngs trimming quality written 7 weeks ago by deepti1rao • 0
0
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1
answer
229
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1
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Where i can find sequencing reads(3rd generation sequencing) data set in which each read length is above 1000bp?
reads written 7 weeks ago by saranpons3 • 50 • updated 7 weeks ago by WouterDeCoster ♦ 21k
3
votes
1
answer
156
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1
answer
Rsamtools and BAM file discordance
reads bam samtools rsamtools igv written 11 weeks ago by cristian • 80 • updated 11 weeks ago by Devon Ryan ♦ 71k
2
votes
1
answer
191
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1
answer
Random downsampling without replacement in bam files only in regions with coverage>x
reads bam coverage written 3 months ago by victorv888 • 0
2
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1
answer
185
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1
answer
Difference between read and contig based taxonomic classification
reads classification contigs taxonomic written 3 months ago by BAGeno • 20 • updated 3 months ago by Sej Modha • 1.9k
11
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3
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302
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5 follow
3
answers
Calculating p-Value for an observed/expected Ratio
reads chip-seq written 4 months ago by chrys • 30 • updated 4 months ago by Ben • 50
2
votes
1
answer
231
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1
answer
wgsim no output
reads assembly wgsim written 4 months ago by robinjugas • 0
2
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4
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290
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8 follow
4
answers
Remove duplicates reads Ids
reads duplicates fastq mapping ids written 4 months ago by BioGeek • 80
1
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1
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257
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1
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How to extract high coverage region from BAM?
reads ngs bam coverage mapping written 5 months ago by BioGeek • 80 • updated 5 months ago by Pierre Lindenbaum ♦ 98k
0
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0
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221
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0
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QIEA and CRO algorithms for assembly of sequencing reads produced by NGS technology
reads assembly ngs algorithm written 5 months ago by seta • 920
1
vote
1
answer
186
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1
answer
How does coverage of all contigs varies?
reads ngs coverage depth written 6 months ago by BioGeek • 80 • updated 6 months ago by h.mon ♦ 8.7k
3
votes
1
answer
301
views
1
answer
Remove specific reads from fastq file
reads fastq written 6 months ago by chrys • 30 • updated 6 months ago by genomax ♦ 33k
2
votes
2
answers
298
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2
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How to cluster reads within the fastq file? Is their any tool?
reads assembly fastq alignment clustering written 6 months ago by bioinforesearchquestions • 90 • updated 6 months ago by Alex Reynolds ♦ 20k
9
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3
answers
260
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3
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[solved] Read a file once and get next lines that match a list of pattern with awk ?
reads barcode grep sed awk written 6 months ago by Franck8413 • 10
0
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0
answers
187
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0
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Most represented reads in SAM file
reads sam representated written 6 months ago by Picasa • 310
0
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0
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270
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0
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How to extract all - strand mapped reads location of reference genome using BAM file?
reads ngs bam sam written 7 months ago by BioGeek • 80
0
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0
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193
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0
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Mapping reads to Primers Combinations(Custom Reference Genome)
reads mapping sequencing written 7 months ago by bharath.mh24 • 0
17
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4
answers
639
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5 follow
4
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Fastq Trimmer by pattern
reads fastq trimming terminal written 8 months ago by dzisis1986 • 0
3
votes
1
answer
465
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5 follow
1
answer
Metagenome Read Simulators
reads simulator metagenomics written 7 months ago by dlawre14 • 10 • updated 7 months ago by genomax ♦ 33k
11
votes
4
answers
8.6k
views
7 follow
4
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How Can I Find Out Unknown Illumina Barcode.
reads illumina fastq hiseq written 3.7 years ago by samsara • 510 • updated 8 months ago by elgart • 0
1
vote
1
answer
345
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1
answer
How to confirm forward and reverse primer matches the beggining of each read and keep only reads with fwd and rev primers ?
reads fastq primers filtering sequencing written 8 months ago by dzisis1986 • 0 • updated 8 months ago by Pierre Lindenbaum ♦ 98k
2
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3
answers
1.8k
views
3
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aligner for CORRECTED pacbio long reads
reads pacbio align longreads sequencing written 2.7 years ago by cmo • 30 • updated 8 months ago by Felix Francis • 420
5
votes
1
answer
1.4k
views
1
answer
Difference between samtools DEPTH and MPILEUP
reads samtools chip-seq mpileup depth written 11 months ago by ariel.balter • 110 • updated 11 months ago by Devon Ryan ♦ 71k
0
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2
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327
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2
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Metagenomic Iontorrent reads: filtering and denoising
reads denoise metagenome filtering written 11 months ago by fhsantanna • 340 • updated 11 months ago by sacha • 810
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