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<prev • 185 results • page 1 of 7 • next >
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Problems with Reference alleles at VCF files
vcf reference snp written 4 weeks ago by epifaniarango • 0
2
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99
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Failure in extracting reads from bam file due to unknown reference
extraction alignment reference bam written 4 weeks ago by marongiu.luigi • 420
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62
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Merged Reference Panel using WES data
imputation reference sequencing written 5 weeks ago by shamav523 • 0
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171
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E coli Illumina paired assembly using a reference genome?
genome assembly reference sequencing written 4 months ago by lg248 • 0
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136
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reference peptide database (post-translational products)
peptides database reference proteins written 4 months ago by gtrwst9 • 0
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1
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1
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Illumina Pe Reads Mapping To Reference Genome
illumina metagenomics reference bowtie2 written 6.8 years ago by rohita.sinha • 0 • updated 5 months ago by Biostar ♦♦ 20
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Beagle phasing without map and reference parameters
reference map beagle written 5 months ago by Shicheng Guo • 7.8k
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217
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How can I get the ID reference genes in GEO ?
geo id reference gene id written 8 months ago by Lila M • 800
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2
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255
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5 follow
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Why does UCSC produce reference genomes when GRC already does it well?
assembly reference written 8 months ago by BioinformaticsLad • 140 • updated 8 months ago by WouterDeCoster ♦ 42k
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1
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11 follow
1
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Definition of minor and major allele and connection with risk, effect, wildtype and reference allele
alleles minor reference risk major written 19 months ago by m93 • 170 • updated 8 months ago by alhamidi.reem • 10
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183
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high frequency protein truncating variants in hg19
genome annotation reference written 8 months ago by giovanni.birolo • 0 • updated 8 months ago by WouterDeCoster ♦ 42k
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189
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Are there any other reference alingnment bases than Balibase?
alignment reference balibase databases written 9 months ago by MichaelTrev • 10
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2
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1.8k
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12 follow
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Assembling PacBio reads using a reference genome
assembly resequencing reference pacbio written 2.4 years ago by celeste • 50 • updated 10 months ago by mcsimenc • 10
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1
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435
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1
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Where can I find the reference files for the 1000 Genome project VCF data?
vcf 1000 genome reference written 11 months ago by caggtaagtat • 900 • updated 11 months ago by finswimmer ♦ 13k
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346
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Finding and changing a given position in hg19 ref fasta file
fasta reference hg19 written 11 months ago by cetin.m • 30
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530
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6 follow
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Link for pre-indexed BWA indices for human reference
genome reference bwa human index written 12 months ago by lakhujanivijay ♦ 4.7k
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1
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802
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1
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mapping rate of small rna-seq with different references
smrna-seq reference mapping rate written 21 months ago by woongjaej • 10 • updated 13 months ago by h.mon ♦ 28k
1
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3
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476
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3
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Reference based assembly
assembly reference written 14 months ago by deepti1rao • 30 • updated 13 months ago by jean.elbers • 1.3k
4
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1
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665
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1
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Current version of human reference Genome Assembly
genome assembly reference written 13 months ago by kspata • 60 • updated 13 months ago by vkkodali • 1.5k
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3
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772
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5 follow
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How to use samtools tview goto with long reference sequence name
samtools goto reference tview written 13 months ago by quokka • 10 • updated 13 months ago by John Marshall ♦ 1.8k
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Fetched gene from gff file shows similarity to other organism
gff reference written 14 months ago by shubhra.bhattacharya • 120
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5 follow
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convert fasta/gb to vcf
vcf file conversion reference written 14 months ago by marongiu.luigi • 420
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1
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2.0k
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5 follow
1
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GRCh37.p13 download at NCBI FTP?
ncbi grch37 reference written 14 months ago by Marvin • 150 • updated 14 months ago by Kevin Blighe ♦ 52k
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1
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1
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How to (and where) download Zebrafish Reference Genome (other than Ensembl or USCS)?
genome fasta zebrafish reference daniorerio written 15 months ago by realnewbie • 10 • updated 15 months ago by WouterDeCoster ♦ 42k
10
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1
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562
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5 follow
1
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Forum: How to acknowledge in the paper a reference genome that hasn't been published yet?
paper forum reference written 16 months ago by ciemanek • 130 • updated 15 months ago by kate.kross90 • 0
12
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2
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439
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6 follow
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why do bed files not contain information about the reference?
bed hg38 reference hg19 written 16 months ago by Marvin • 150 • updated 16 months ago by Friederike ♦ 5.2k
1
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1
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449
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1
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Where I can download a reference genome of a pine tree transcriptome?
plant reference conifer transcriptome written 16 months ago by conifer_genomics_uk • 0 • updated 16 months ago by genomax ♦ 75k
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1
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405
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1
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Ambiguous position in SNPdb file and reference genome
ngs reference snp written 17 months ago by bwczech • 90 • updated 17 months ago by Pierre Lindenbaum ♦ 124k
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517
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1
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Can't find chr1 in a large fasta file using samtools/htsjdk
fasta assembly reference samtools written 17 months ago by ljw1001 • 0 • updated 17 months ago by Eric Lim • 1.6k
2
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1
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373
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1
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How does variant callers deal with N in the reference sequence?
genome reference N variant call written 18 months ago by pyjiang2 • 30 • updated 18 months ago by JC ♦ 9.1k
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