Showing: referencereset
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GRCh37.p13 download at NCBI FTP?
ncbi grch37 reference written 20 hours ago by Marvin120
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96
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10
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238
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5 follow
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143
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SNPeff: can I just use hg19?
snpeff reference written 29 days ago by Marvin120 • updated 29 days ago by h.mon19k
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138
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6 follow
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why do bed files not contain information about the reference?
bed hg38 reference hg19 written 6 weeks ago by Marvin120 • updated 6 weeks ago by Friederike2.1k
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Ambiguous position in SNPdb file and reference genome
ngs reference snp written 9 weeks ago by bwczech0 • updated 9 weeks ago by Pierre Lindenbaum112k
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Can't find chr1 in a large fasta file using samtools/htsjdk
fasta assembly reference samtools written 12 weeks ago by ljw10010 • updated 12 weeks ago by Eric Lim960
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How does variant callers deal with N in the reference sequence?
genome reference N variant call written 3 months ago by pyjiang230 • updated 3 months ago by JC6.8k
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CNV calling using ExomeDepth
exomedepth reference cnv written 4 months ago by Nandini660 • updated 4 months ago by andrew.j.skelton735.3k
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6 follow
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Recreate reference fasta from bam file
fasta bam reference written 4 months ago by Chris Miller20k • updated 4 months ago by h.mon19k
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5 follow
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Problems For Mapping Contigs Onto Reference
genome reference blat written 7.4 years ago by Plantae380 • updated 4 months ago by deepti1rao0
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235
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mapping rate of small rna-seq with different references
smrna-seq reference mapping rate written 6 months ago by woongjaej10 • updated 6 months ago by sjbasu30
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592
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hg19 exome reference and index
exome hg19 reference index written 7 months ago by genomics Newbie10 • updated 7 months ago by Kevin Blighe28k
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1
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Impute2 Custom Reference Panel
impute2 imputation reference recombination map written 2.8 years ago by ngsgene350 • updated 9 months ago by Kevin Blighe28k
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Consensus fasta file with uncovered bases set to Ns
genome bed consensus reference fasta written 13 months ago by deepti1rao0 • updated 13 months ago by Matt Shirley8.6k
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Assembling PacBio reads using a reference genome
assembly resequencing reference pacbio written 14 months ago by celeste20 • updated 13 months ago by tjduncan190
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RepeatMasker: considering only the matches with a specific length
alignment length reference repeatmasker written 14 months ago by gabri40 • updated 13 months ago by Biostar ♦♦ 20
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