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2
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1
answer
138
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1
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mouse chrY centromere location
genome reference written 6 weeks ago by igor ♦ 11k
8
votes
3
answers
3.6k
views
6 follow
3
answers
List Of Dbsnp Variants Where Reference Genome Has Minor Allele
exome reference dbsnp variant written 8.7 years ago by Ana Rodrigues Grant • 30 • updated 4 months ago by Biostar ♦♦ 20
0
votes
0
answers
244
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5 follow
0
answers
Reference sequence to be used for assembly in nanopore
assembly reference written 7 months ago by Sudosundu • 0
0
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0
answers
176
views
0
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Problems with Reference alleles at VCF files
vcf reference snp written 9 months ago by epifaniarango • 0
2
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0
answers
333
views
0
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Failure in extracting reads from bam file due to unknown reference
extraction alignment reference bam written 9 months ago by marongiu.luigi • 520
0
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0
answers
177
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0
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Merged Reference Panel using WES data
imputation reference sequencing written 9 months ago by shamav523 • 0
3
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0
answers
290
views
0
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E coli Illumina paired assembly using a reference genome?
genome assembly reference sequencing written 12 months ago by lg248 • 0
0
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0
answers
224
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0
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reference peptide database (post-translational products)
peptides database reference proteins written 12 months ago by gtrwst9 • 0
4
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1
answer
2.8k
views
1
answer
Illumina Pe Reads Mapping To Reference Genome
illumina metagenomics reference bowtie2 written 7.5 years ago by rohita.sinha • 0 • updated 13 months ago by Biostar ♦♦ 20
0
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0
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371
views
0
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Beagle phasing without map and reference parameters
reference map beagle written 13 months ago by Shicheng Guo • 8.3k
0
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0
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308
views
0
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How can I get the ID reference genes in GEO ?
geo id reference gene id written 16 months ago by Lila M • 820
16
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2
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353
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5 follow
2
answers
Why does UCSC produce reference genomes when GRC already does it well?
assembly reference written 16 months ago by BioinformaticsLad • 160 • updated 16 months ago by WouterDeCoster ♦ 44k
36
votes
1
answer
16k
views
20 follow
1
answer
Definition of minor and major allele and connection with risk, effect, wildtype and reference allele
alleles minor reference risk major written 2.3 years ago by m93 • 240 • updated 16 months ago by alhamidi.reem • 20
0
votes
1
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273
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1
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high frequency protein truncating variants in hg19
genome annotation reference written 16 months ago by giovanni.birolo • 0 • updated 16 months ago by WouterDeCoster ♦ 44k
0
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0
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264
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0
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Are there any other reference alingnment bases than Balibase?
alignment reference balibase databases written 17 months ago by MichaelTrev • 10
8
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2
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2.1k
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12 follow
2
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Assembling PacBio reads using a reference genome
assembly resequencing reference pacbio written 3.1 years ago by celeste • 50 • updated 18 months ago by mcsimenc • 10
2
votes
1
answer
785
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1
answer
Where can I find the reference files for the 1000 Genome project VCF data?
vcf 1000 genome reference written 19 months ago by caggtaagtat • 1.1k • updated 19 months ago by finswimmer ♦ 13k
2
votes
2
answers
476
views
2
answers
Finding and changing a given position in hg19 ref fasta file
fasta reference hg19 written 19 months ago by cetin.m • 50
3
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2
answers
856
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6 follow
2
answers
Link for pre-indexed BWA indices for human reference
genome reference bwa human index written 20 months ago by lakhujanivijay ♦ 5.1k
0
votes
1
answer
982
views
1
answer
mapping rate of small rna-seq with different references
smrna-seq reference mapping rate written 2.4 years ago by woongjaej • 10 • updated 21 months ago by h.mon ♦ 30k
1
vote
3
answers
894
views
3
answers
Reference based assembly
assembly reference written 22 months ago by deepti1rao • 30 • updated 21 months ago by jean.elbers • 1.4k
4
votes
1
answer
942
views
1
answer
Current version of human reference Genome Assembly
genome assembly reference written 21 months ago by kspata • 70 • updated 21 months ago by vkkodali • 2.0k
1
vote
3
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1.2k
views
5 follow
3
answers
How to use samtools tview goto with long reference sequence name
samtools goto reference tview written 21 months ago by quokka • 10 • updated 21 months ago by John Marshall ♦ 2.0k
0
votes
0
answers
539
views
0
answers
Fetched gene from gff file shows similarity to other organism
gff reference written 22 months ago by shubhra.bhattacharya • 120
7
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0
answers
1.7k
views
5 follow
0
answers
convert fasta/gb to vcf
vcf file conversion reference written 22 months ago by marongiu.luigi • 520
10
votes
1
answer
3.0k
views
5 follow
1
answer
GRCh37.p13 download at NCBI FTP?
ncbi grch37 reference written 22 months ago by Marvin • 150 • updated 22 months ago by Kevin Blighe ♦ 63k
8
votes
1
answer
1.5k
views
1
answer
How to (and where) download Zebrafish Reference Genome (other than Ensembl or USCS)?
genome fasta zebrafish reference daniorerio written 23 months ago by realnewbie • 20 • updated 23 months ago by WouterDeCoster ♦ 44k
10
votes
1
answer
671
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5 follow
1
answer
Forum: How to acknowledge in the paper a reference genome that hasn't been published yet?
paper forum reference written 23 months ago by ciemanek • 140 • updated 23 months ago by kate.kross90 • 0
12
votes
2
answers
559
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6 follow
2
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why do bed files not contain information about the reference?
bed hg38 reference hg19 written 24 months ago by Marvin • 150 • updated 24 months ago by Friederike ♦ 5.9k
1
vote
1
answer
580
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1
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Where I can download a reference genome of a pine tree transcriptome?
plant reference conifer transcriptome written 2.0 years ago by conifer_genomics_uk • 0 • updated 2.0 years ago by genomax ♦ 87k
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