Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: reference • reset
or   Classic search
<prev • 156 results • page 1 of 6 • next >
7
votes
1
answer
103
views
1
answer
Definition of minor and major allele and connection with risk, effect, wildtype and reference allele
alleles minor reference risk major written 2 days ago by m93 • 20 • updated 2 days ago by Kevin Blighe ♦ 17k
6
votes
1
answer
86
views
1
answer
Difference between lower and upper case N in soft masked genome
genome masking reference written 8 days ago by guillaume.rbt • 370
1
vote
0
answers
64
views
0
answers
Batch query reference nucleotide
genomic sequence reference snp written 14 days ago by jennagu • 0
1
vote
0
answers
80
views
0
answers
Illegal instruction (core dumped) - Indexing a reference genome with STAR
indexing reference mapping rna-seq star written 28 days ago by raquelgarza95 • 0
0
votes
0
answers
92
views
0
answers
bioperl fasta indexing problem with non model genome sequence
mrna fasta bioperl reference index written 6 weeks ago by shreyasibiswas88 • 30
2
votes
1
answer
103
views
1
answer
mm10: Sequence length difference between interval file and reference
mm10 sequence length ucsc reference mouse written 6 weeks ago by Nandini • 540 • updated 6 weeks ago by Pierre Lindenbaum ♦ 106k
0
votes
1
answer
106
views
1
answer
mapping rate of small rna-seq with different references
smrna-seq reference mapping rate written 7 weeks ago by woongjaej • 10 • updated 7 weeks ago by sjbasu • 20
1
vote
1
answer
154
views
1
answer
Question: removing germline polymorphism for mouse sequencing data
germline polymorphism reference sequencing written 9 weeks ago by Jung-ho Kong • 0 • updated 9 weeks ago by Kevin Blighe ♦ 17k
1
vote
1
answer
189
views
1
answer
How to get --transcript-to-gene-map <file> in RSEM?
index reference rsem rna-seq transcriptome written 10 weeks ago by sciencer • 30
3
votes
1
answer
204
views
1
answer
hg19 exome reference and index
exome hg19 reference index written 12 weeks ago by genomics Newbie • 0 • updated 12 weeks ago by Kevin Blighe ♦ 17k
0
votes
1
answer
887
views
1
answer
Impute2 Custom Reference Panel
impute2 imputation reference recombination map written 2.4 years ago by ngsgene • 350 • updated 4 months ago by Kevin Blighe ♦ 17k
2
votes
0
answers
323
views
0
answers
How do I apply a patch to hg38?
patch hg38 reference human reference written 6 months ago by imperialcommando117 • 0
3
votes
2
answers
417
views
2
answers
CDS FASTA file as Reference sequence for Ion Torrent
fasta cds .bed next-gen reference written 6 months ago by serenabivona • 10
1
vote
2
answers
437
views
2
answers
Need help inserting a custom gene sequence into ref genome and GTF file
gene genome reference rna-seq sequencing written 8 months ago by maxwellb • 0
1
vote
2
answers
389
views
2
answers
Consensus fasta file with uncovered bases set to Ns
genome bed consensus reference fasta written 8 months ago by deepti1rao • 0 • updated 8 months ago by Matt Shirley ♦ 8.3k
3
votes
2
answers
760
views
9 follow
2
answers
Assembling PacBio reads using a reference genome
assembly resequencing reference pacbio written 9 months ago by celeste • 20 • updated 8 months ago by tjduncan • 130
0
votes
0
answers
257
views
0
answers
RepeatMasker: considering only the matches with a specific length
alignment length reference repeatmasker written 9 months ago by gabri • 10 • updated 8 months ago by Biostar ♦♦ 20
0
votes
2
answers
915
views
2
answers
Between mm10.p4 and mm10, why the total sequence length different?
genome assembly mm10 reference mouse written 2.5 years ago by kenneth.jh.han • 0 • updated 9 months ago by Biostar ♦♦ 20
0
votes
1
answer
297
views
1
answer
IGV: Show reference sequence?
reference igv written 9 months ago by Marvin • 90
2
votes
1
answer
560
views
1
answer
Using cnvkit for targeted amplicon sequencing
cnvkit targeted amplicon sequencing reference cnv written 10 months ago by ingrid.schulman • 0 • updated 10 months ago by Eric T. • 2.1k
6
votes
1
answer
423
views
1
answer
HeLa reference fasta
reference hela hg19 written 10 months ago by Sergio Martínez Cuesta • 30
1
vote
0
answers
411
views
0
answers
Can I improve my de novo assembly with a reference genome?
de novo assembly genome reference pacbio written 10 months ago by cristian • 80
2
votes
2
answers
812
views
2
answers
Reference guided assembly of contigs
assembly tools bacteria contigs reference written 11 months ago by hman6.2.91 • 0
0
votes
0
answers
282
views
0
answers
How to build reference for an artificial reporter sequence in GATK?
gatk amplicon reference written 11 months ago by yinboz • 0
30
votes
4
answers
4.8k
views
11 follow
4
answers
Ucsc/Ensembl Bam Converter?
ensembl bam reference ucsc written 6.8 years ago by 2184687-1231-83- • 4.9k • updated 11 months ago by balwierz • 40
7
votes
3
answers
2.3k
views
3
answers
Genome Reference For Bam Files In Ensembl Vs Ucsc?
next-gen sequencing reference ensembl bam ucsc written 6.9 years ago by 2184687-1231-83- • 4.9k • updated 11 months ago by Biostar ♦♦ 20
0
votes
0
answers
527
views
0
answers
Difference in the following reference genomes, both from Broad Institute FTP?
assembly alignment reference written 12 months ago by ari.nazarian • 0
0
votes
0
answers
879
views
0
answers
Reference Transcriptome for hg19
salmon transcriptome reference rna-seq hg19 written 12 months ago by stefanos.bamopoulos • 30
1
vote
2
answers
424
views
2
answers
Best reference database for 16S soil datasets?
metagenomics reference 16s soil written 13 months ago by Lina F • 110 • updated 13 months ago by Denise - Open Targets • 4.4k
10
votes
2
answers
6.4k
views
6 follow
2
answers
When Aligning Mirna (Micro Rna) What Reference Is Better? (Whole Genome Or Mirbase)
alignment reference mirna written 7.5 years ago by Doctoroots • 740 • updated 14 months ago by enxxx23 • 170
<prev • 156 results • page 1 of 6 • next >
Recent Votes
Recent Locations • All »
  • Egypt, 1 minute ago
  • Seattle,WA, USA, 1 minute ago
  • United States, 2 minutes ago
  • United States, 3 minutes ago
  • Brazil, 4 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 985 users visited in the last hour