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Showing: regex • reset
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<prev • 17 results • page 1 of 1 • next >
11
votes
4
answers
194
views
4
answers
Extract a word from inside the text
R awk regex written 29 days ago by mostafarafiepour • 60 • updated 29 days ago by cpad0112 • 10k
5
votes
4
answers
187
views
4
answers
Trying to use regular expressions to edit a PDB text file.What am I doing wrong?
python biopython regex written 6 weeks ago by westin.kosater • 0 • updated 6 weeks ago by jrj.healey ♦ 9.1k
15
votes
1
answer
230
views
1
answer
Debugging a sed script to extract values from rows in .txt file
sed unix regex written 9 weeks ago by kristina.mahan • 20
16
votes
3
answers
512
views
10 follow
3
answers
Batch rename *fastq.gz files using regular expression
rename perl fastq regex written 5 months ago by Leonardo Normando • 50 • updated 5 months ago by cpad0112 • 10k
9
votes
3
answers
555
views
3
answers
Any ideas on converting IUPAC ambiguity codes in a fasta file
fasta iupac regex perl bash written 10 months ago by SaltedPork • 80 • updated 10 months ago by st.ph.n • 2.4k
0
votes
0
answers
552
views
0
answers
obtain selected elements from refseq using awk and regex
awk refseq regex written 15 months ago by theoharis • 0
7
votes
1
answer
1.1k
views
5 follow
1
answer
Parse fasta header with regex in python
fasta python biopython regex written 16 months ago by David • 120 • updated 15 months ago by a.zielezinski ♦ 8.5k
3
votes
2
answers
467
views
2
answers
Column Regex Find And Replace
text manipulation regex written 18 months ago by alizohaib7 • 10 • updated 18 months ago by shenwei356 ♦ 4.3k
3
votes
2
answers
943
views
5 follow
2
answers
Generate column names on the fly R
R regex written 20 months ago by Jack • 80 • updated 20 months ago by Charles Plessy • 2.6k
13
votes
2
answers
1.3k
views
5 follow
2
answers
Converting Uniprot File to a Fasta File in Perl
fasta perl uniprot regex written 22 months ago by kingkajc1 • 0
0
votes
3
answers
660
views
5 follow
3
answers
How to extract snp names?
python regex written 23 months ago by prathikkv_1992 • 0 • updated 23 months ago by WouterDeCoster ♦ 35k
1
vote
0
answers
824
views
0
answers
How to iterate using regex over output of SeqIO -> using output of seq_record.seq as string to Regex over
seqio biopython regex written 2.1 years ago by zebudavid • 10
0
votes
2
answers
611
views
2
answers
Regular expression problem while trying to interpolate variable as pattern in Python
python biopython regex written 2.4 years ago by uxue33 • 20 • updated 2.4 years ago by Damian Kao ♦ 15k
5
votes
1
answer
1.2k
views
1
answer
awk : if length to a pattern at column 2 is less than 5
awk regex written 2.6 years ago by mbk0asis • 390 • updated 2.6 years ago by Jorge Amigo ♦ 11k
9
votes
6
answers
6.4k
views
6
answers
Extracting specific FASTA sequences from a complex FASTA file
fasta python regex written 3.8 years ago by boileau • 0 • updated 3.8 years ago by barvazduck • 10
4
votes
1
answer
2.1k
views
5 follow
1
answer
Is it possible using a regex in perl to include both accession number and the matched sequence when printing?
perl protein match regex written 4.6 years ago by agabali • 0 • updated 4.6 years ago by promise • 0
6
votes
1
answer
1.5k
views
1
answer
In R, how do I apply regexes to specific parts of a string that contains a pattern?
R regex written 4.6 years ago by soosus • 10 • updated 4.6 years ago by Michael Dondrup ♦ 45k
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