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<prev • 18 results • page 1 of 1 • next >
8
votes
3
answers
146
views
3
answers
Regular expression to extract mutations type
R regex written 4 weeks ago by banerjeeshayantan • 80 • updated 4 weeks ago by manuel.belmadani • 490
11
votes
4
answers
280
views
4
answers
Extract a word from inside the text
R awk regex written 3 months ago by mostafarafiepour • 60 • updated 3 months ago by cpad0112 ♦ 11k
5
votes
4
answers
245
views
4
answers
Trying to use regular expressions to edit a PDB text file.What am I doing wrong?
python biopython regex written 3 months ago by westin.kosater • 10 • updated 3 months ago by jrj.healey ♦ 11k
15
votes
1
answer
291
views
1
answer
Debugging a sed script to extract values from rows in .txt file
sed unix regex written 4 months ago by kristina.mahan • 30
16
votes
3
answers
606
views
10 follow
3
answers
Batch rename *fastq.gz files using regular expression
rename perl fastq regex written 8 months ago by Leonardo Normando • 50 • updated 8 months ago by cpad0112 ♦ 11k
9
votes
3
answers
669
views
3
answers
Any ideas on converting IUPAC ambiguity codes in a fasta file
fasta iupac regex perl bash written 12 months ago by SaltedPork • 80 • updated 12 months ago by st.ph.n • 2.4k
0
votes
0
answers
585
views
0
answers
obtain selected elements from refseq using awk and regex
awk refseq regex written 18 months ago by theoharis • 0
7
votes
1
answer
1.2k
views
5 follow
1
answer
Parse fasta header with regex in python
fasta python biopython regex written 18 months ago by David • 140 • updated 18 months ago by a.zielezinski ♦ 8.5k
3
votes
2
answers
514
views
2
answers
Column Regex Find And Replace
text manipulation regex written 20 months ago by alizohaib7 • 10 • updated 20 months ago by shenwei356 ♦ 4.5k
3
votes
2
answers
1.1k
views
5 follow
2
answers
Generate column names on the fly R
R regex written 22 months ago by Jack • 80 • updated 22 months ago by Charles Plessy • 2.6k
13
votes
2
answers
1.5k
views
5 follow
2
answers
Converting Uniprot File to a Fasta File in Perl
fasta perl uniprot regex written 2.0 years ago by kingkajc1 • 0
0
votes
3
answers
711
views
5 follow
3
answers
How to extract snp names?
python regex written 2.1 years ago by prathikkv_1992 • 0 • updated 2.1 years ago by WouterDeCoster ♦ 37k
1
vote
0
answers
871
views
0
answers
How to iterate using regex over output of SeqIO -> using output of seq_record.seq as string to Regex over
seqio biopython regex written 2.3 years ago by zebudavid • 10
0
votes
2
answers
646
views
2
answers
Regular expression problem while trying to interpolate variable as pattern in Python
python biopython regex written 2.6 years ago by uxue33 • 20 • updated 2.6 years ago by Damian Kao ♦ 15k
5
votes
1
answer
1.3k
views
1
answer
awk : if length to a pattern at column 2 is less than 5
awk regex written 2.8 years ago by mbk0asis • 410 • updated 2.8 years ago by Jorge Amigo ♦ 11k
9
votes
6
answers
6.5k
views
6
answers
Extracting specific FASTA sequences from a complex FASTA file
fasta python regex written 4.0 years ago by boileau • 0 • updated 4.0 years ago by barvazduck • 10
4
votes
1
answer
2.1k
views
5 follow
1
answer
Is it possible using a regex in perl to include both accession number and the matched sequence when printing?
perl protein match regex written 4.8 years ago by agabali • 0 • updated 4.8 years ago by promise • 0
6
votes
1
answer
1.5k
views
1
answer
In R, how do I apply regexes to specific parts of a string that contains a pattern?
R regex written 4.8 years ago by soosus • 10 • updated 4.8 years ago by Michael Dondrup ♦ 45k
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