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Choosing the directory of .out file of Repeat Masker
output directory repeatmasker written 3 hours ago by manousid • 0
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1
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77
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1
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RepeatMasker: alignment sometimes doesn't fit
ssearch repeats alignment cross_match repeatmasker written 16 days ago by Ondřej Moravčík • 0 • updated 16 days ago by devarora • 50
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66
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Combined TEs libraries annotation
transposable repear repeatmasker tes annotations written 4 weeks ago by ohon.kin • 0
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1
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1.7k
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1
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How to run RepeatMasker only with my own library?
repeatmasker library written 4.0 years ago by loczi94 • 0 • updated 7 weeks ago by ohon.kin • 0
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309
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Maker (Gene annotation) RepeatMasker error
gene annotation repeatmasker maker written 5 months ago by ricardoguerreiro2121 • 50
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1
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267
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1
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How to mask all repeats and low complexity regions using RepeatMasker?
repeatmasker written 7 months ago by zwz110 • 0 • updated 7 months ago by 2nelly • 170
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1
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10 follow
1
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Ncbi-Blast+ Version 2.2.23 'Make' Error
blast error repeatmasker written 7.9 years ago by Heidi • 10 • updated 7 months ago by abhijit.synl • 50
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296
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error invoking makeblastdb
genome repeatmasker written 8 months ago by SeaStar • 20 • updated 7 months ago by Biostar ♦♦ 20
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1
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483
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1
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repeatmasker species setting
genome repeatmasker written 8 months ago by Chironex • 20 • updated 8 months ago by Juke-34 • 3.3k
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177
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RepeatMasker database differences between versions.
opensource libraries repeatmasker repbase written 9 months ago by E • 0 • updated 9 months ago by WouterDeCoster ♦ 43k
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7 follow
2
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Missing or disappearing output RepeatMasker
makeblastdb repeatmasker written 5.7 years ago by mtollis • 30 • updated 10 months ago by gbdias • 80
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2.9k
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0
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Repeatmasker Crashes Before End Of Run With "Can'T Fork..."
makeblastdb repeats alignment repeatmasker blast written 8.2 years ago by User 9996 • 810 • updated 10 months ago by Biostar ♦♦ 20
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744
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1
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Error in repeatmodeler consensi file output
repeat modeler repeat masker repeatmasker written 18 months ago by ngs_new_user • 0 • updated 10 months ago by svitlana.lukicheva • 10
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446
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1
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error installation rmblast
blast repeatmasker written 10 months ago by Chironex • 20 • updated 10 months ago by ATpoint ♦ 29k
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305
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RepeatModeler run error troubleshooting
builddatabase blastdb repeatmodeler repeatmasker written 11 months ago by Anand Rao • 260
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1
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266
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1
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Solved: RepeatMasker Output disappears - no output
repeatmasker written 12 months ago by katerinapargana • 0
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216
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0
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Genome Annotations? RepeatMasker class/family? Regulation?
annotation ngs rna-seq repeatmasker written 12 months ago by Susmita Mandal • 60
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8 follow
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Repeatmasker, Can't locate Text/Soundex.pm
repeatmasker written 2.5 years ago by qwzhang0601 • 70 • updated 12 months ago by virginia.s.markham • 50
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744
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Parsing RepeatMasker Output Files
fasta repeatmasker written 13 months ago by gtasource • 30
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435
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How can I get Kimura distances for individual loci from my align.fa file from RepeatMasker
repeatmasker written 14 months ago by a.rex • 200 • updated 13 months ago by Biostar ♦♦ 20
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1
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1.4k
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1
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RepeatMasker Library Help
repeatmasker library repbase written 14 months ago by chris.bonner • 0
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1
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1.1k
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1
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Problems with Repeatmasker
software error repeatmasker written 2.8 years ago by ccanchaya • 0 • updated 14 months ago by transposable.element • 0
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1
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554
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1
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guidance for communication online seach engine with python or R script?
python rna-seq online search engine repeatmasker written 23 months ago by boaty • 90
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559
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Mapping to repeat consensus sequences?
repeatmodeler repeatmasker written 16 months ago by a.rex • 200
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1
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1.2k
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1
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Annotation of repeatative elements
censor repeatmasker repbase written 3.5 years ago by Rahul • 30 • updated 17 months ago by zx8754 ♦ 9.0k
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486
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RepeatMasker Results Visualization
python sequence jupyter notebook repeatmasker written 17 months ago by aset8 • 0
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1
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1
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Why no SINEs, LINEs, LTR and DNA elements were found by Repeatmasker
repeats repeatmasker written 2.5 years ago by qwzhang0601 • 70 • updated 18 months ago by Charles Warden ♦ 7.6k
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3
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1.7k
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3
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RepeatModeler cannot be run in parallel
repeatmodeler repeatmasker written 3.5 years ago by tlorin • 260 • updated 18 months ago by nehleen11 • 0
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2.0k
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1
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ReapeatMasker only uses E. coli insertion elements
genome repeatmasker written 4.4 years ago by Ric • 290 • updated 18 months ago by ohon.kin • 0
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471
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RepeatMasker - differing results - help!
repeatmasker repeatmodeler written 19 months ago by byrne.hazel1 • 0
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