Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing selected topics • reset
or   Classic search
<prev • 83 results • page 1 of 3 • next >
0
votes
1
answer
114
views
1
answer
RepeatMasker: alignment sometimes doesn't fit
ssearch repeats alignment cross_match repeatmasker written 3 months ago by Ondřej Moravčík • 0 • updated 3 months ago by devarora • 150
6
votes
8
answers
4.3k
views
17 follow
8
answers
Edgeredef Failed When Running Repeatmodeler
repeats error written 9.3 years ago by Daniel Standage ♦ 3.9k • updated 4 months ago by devarora • 150
6
votes
1
answer
257
views
1
answer
Detect repeats problematic for PCR
repeats prc written 7 months ago by mschmid • 150
0
votes
1
answer
360
views
1
answer
Column explanation for repeat database from UCSC
repeats rmsk ucsc written 10 months ago by Louis Kok • 20 • updated 10 months ago by finswimmer ♦ 13k
6
votes
3
answers
3.3k
views
3
answers
How To Find Repeat Expansion Using Exome/Genome Sequencing Data?
repeats written 7.5 years ago by michealsmith • 750 • updated 11 months ago by niuyw • 30
0
votes
0
answers
274
views
0
answers
Finding repeats in proteins
software repeats finder motif written 12 months ago by newacclol • 10 • updated 12 months ago by RamRS ♦ 27k
0
votes
0
answers
3.0k
views
0
answers
Repeatmasker Crashes Before End Of Run With "Can'T Fork..."
makeblastdb repeats alignment repeatmasker blast written 8.5 years ago by User 9996 • 810 • updated 13 months ago by Biostar ♦♦ 20
0
votes
0
answers
381
views
0
answers
Getting protein fasta from RNAseq BAM file (human) paying attention on repeats
fasta repeats bam blastx rna-seq written 16 months ago by pauli.pauli • 0 • updated 16 months ago by RamRS ♦ 27k
2
votes
1
answer
1.8k
views
1
answer
Which repeats are present in soft-masked sequence?
genome annotation repeats softmasked written 4.8 years ago by Leszek ♦ 4.0k • updated 17 months ago by Biostar ♦♦ 20
1
vote
1
answer
372
views
1
answer
Using repeat region filter post QC
exome filter ngs repeats written 18 months ago by zx8754 ♦ 9.2k • updated 18 months ago by Pierre Lindenbaum ♦ 128k
24
votes
5
answers
10k
views
10 follow
5
answers
Where Can I Find A Good Database Of The Repeat Regions Of The Human Genome ?
genome repeats database human written 8.8 years ago by Stephwen • 140 • updated 19 months ago by Charles Warden ♦ 7.7k
0
votes
0
answers
1.3k
views
0
answers
Masking repeats in your alignment
genome repeats sequencing written 3.1 years ago by biogirl • 190 • updated 20 months ago by Biostar ♦♦ 20
7
votes
1
answer
1.2k
views
1
answer
Illegal Division by zero
perl transposable elements repeats written 20 months ago by sicat.paolo20 • 30 • updated 20 months ago by Michael Dondrup ♦ 47k
8
votes
2
answers
4.0k
views
2
answers
Instaling Reas Repeat Finding
repeats next-gen sequencing written 10.1 years ago by Darked89 ♦ 4.2k • updated 21 months ago by RamRS ♦ 27k
0
votes
1
answer
1.5k
views
1
answer
Why no SINEs, LINEs, LTR and DNA elements were found by Repeatmasker
repeats repeatmasker written 2.8 years ago by qwzhang0601 • 70 • updated 21 months ago by Charles Warden ♦ 7.7k
7
votes
1
answer
1.5k
views
1
answer
How to annotate repeats?
sine annotation repeats line normalization written 2.1 years ago by Zee_S • 50 • updated 2.1 years ago by Beuss • 110
0
votes
0
answers
1.3k
views
0
answers
read counts for RNA-seq analysis of repeat elements
repeats rna-seq written 2.2 years ago by qwzhang0601 • 70
1
vote
1
answer
481
views
1
answer
Excluding intervals with repeats
bed repeats masking written 2.2 years ago by rbronste • 360
1
vote
1
answer
1.0k
views
1
answer
Primer design to do qPCR on repetitive elements
repeats repetitive elements qpcr written 2.4 years ago by Gema Sanz • 70 • updated 2.4 years ago by trausch • 1.5k
1
vote
1
answer
955
views
1
answer
Coverage Estimates for Masked Genome
assembly repeats masked written 3.6 years ago by Magpie101 • 0 • updated 2.6 years ago by Biostar ♦♦ 20
2
votes
1
answer
1.7k
views
1
answer
Needed Read Length To Solve Dna Fragments Containing Alu Elements In Vertebrate Genomes?
repeats human written 7.2 years ago by 14134125465346445 • 3.5k • updated 2.7 years ago by Biostar ♦♦ 20
1
vote
0
answers
1.0k
views
0
answers
Masking repeats in ATAC-seq data
repeats atac-seq deseq written 2.7 years ago by rbronste • 360
0
votes
0
answers
739
views
0
answers
Compare repeat elelemts among species
repeats repeatmasker written 2.8 years ago by qwzhang0601 • 70 • updated 2.8 years ago by genomax ♦ 83k
1
vote
1
answer
1.4k
views
1
answer
how to combine two output of RepeatMasker?
repeats next-gen repeatmasker written 2.8 years ago by kk.mahsa • 100
0
votes
1
answer
850
views
1
answer
get repeats for bacteria and viruses to generate simulated reads of repeats
database viruses simulation bacteria repeats written 3.0 years ago by dabid • 0 • updated 3.0 years ago by Jean-Karim Heriche ♦ 22k
1
vote
1
answer
1.3k
views
1
answer
getDiffExpression.pl in HOMER doesn't seem be working... What am I doing wrong?
homer repeats rna 5-aza rna-seq written 3.3 years ago by ron.eitan • 0 • updated 3.1 years ago by k.balaji93 • 10
0
votes
0
answers
1.7k
views
0
answers
Where are examples of Interspersed repeats?
ministatellite str repeats sequence written 3.1 years ago by veronicaschroeder78 • 110
0
votes
0
answers
1.3k
views
0
answers
Assigning RepeatMasker classes and families to Repbase repeats
repeats repeatmasker repbase written 3.2 years ago by Mike • 30
2
votes
1
answer
2.1k
views
1
answer
Detecting Variants near repeats
vcf repeats bam freebayes written 6.0 years ago by Adrian Pelin • 2.4k • updated 3.2 years ago by Macspider • 3.0k
6
votes
1
answer
1.2k
views
1
answer
Quantification of repeats expression
ngs repeats rna-seq written 3.4 years ago by valerie • 80 • updated 3.4 years ago by Constantine • 280
<prev • 83 results • page 1 of 3 • next >
Recent Votes
Recent Locations • All »
  • Macau, just now
  • University of Cape Town, 3 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2070 users visited in the last hour