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<prev • 81 results • page 1 of 3 • next >
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Column explanation for repeat database from UCSC
repeats rmsk ucsc written 10 weeks ago by Louis Kok • 10 • updated 10 weeks ago by finswimmer ♦ 12k
6
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3
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3.1k
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How To Find Repeat Expansion Using Exome/Genome Sequencing Data?
repeats written 6.8 years ago by michealsmith • 740 • updated 12 weeks ago by niuyw • 30
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173
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Finding repeats in proteins
software repeats finder motif written 4 months ago by newacclol • 10 • updated 4 months ago by RamRS ♦ 24k
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Repeatmasker Crashes Before End Of Run With "Can'T Fork..."
makeblastdb repeats alignment repeatmasker blast written 7.8 years ago by User 9996 • 800 • updated 5 months ago by Biostar ♦♦ 20
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Getting protein fasta from RNAseq BAM file (human) paying attention on repeats
fasta repeats bam blastx rna-seq written 8 months ago by pauli.pauli • 0 • updated 8 months ago by RamRS ♦ 24k
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1
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Which repeats are present in soft-masked sequence?
genome annotation repeats softmasked written 4.1 years ago by Leszek ♦ 4.0k • updated 8 months ago by Biostar ♦♦ 20
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1
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267
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1
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Using repeat region filter post QC
exome filter ngs repeats written 10 months ago by zx8754 ♦ 8.2k • updated 10 months ago by Pierre Lindenbaum ♦ 122k
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5
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10 follow
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Where Can I Find A Good Database Of The Repeat Regions Of The Human Genome ?
genome repeats database human written 8.1 years ago by Stephwen • 140 • updated 10 months ago by Charles Warden ♦ 7.2k
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Masking repeats in your alignment
genome repeats sequencing written 2.4 years ago by biogirl • 180 • updated 11 months ago by Biostar ♦♦ 20
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688
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1
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Illegal Division by zero
perl transposable elements repeats written 12 months ago by sicat.paolo20 • 30 • updated 12 months ago by Michael Dondrup ♦ 46k
8
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2
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3.8k
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2
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Instaling Reas Repeat Finding
repeats next-gen sequencing written 9.4 years ago by Darked89 ♦ 4.2k • updated 12 months ago by RamRS ♦ 24k
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Why no SINEs, LINEs, LTR and DNA elements were found by Repeatmasker
repeats repeatmasker written 2.1 years ago by qwzhang0601 • 60 • updated 13 months ago by Charles Warden ♦ 7.2k
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15 follow
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Edgeredef Failed When Running Repeatmodeler
repeats error written 8.6 years ago by Daniel Standage ♦ 3.9k • updated 13 months ago by bioinfo17 • 30
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1
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976
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1
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How to annotate repeats?
sine annotation repeats line normalization written 17 months ago by Zee_S • 30 • updated 17 months ago by Beuss • 110
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read counts for RNA-seq analysis of repeat elements
repeats rna-seq written 17 months ago by qwzhang0601 • 60
1
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1
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375
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1
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Excluding intervals with repeats
bed repeats masking written 18 months ago by rbronste • 260
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Primer design to do qPCR on repetitive elements
repeats repetitive elements qpcr written 20 months ago by Gema Sanz • 70 • updated 20 months ago by trausch • 1.4k
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Coverage Estimates for Masked Genome
assembly repeats masked written 2.9 years ago by Magpie101 • 0 • updated 23 months ago by Biostar ♦♦ 20
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1
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1.6k
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1
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Needed Read Length To Solve Dna Fragments Containing Alu Elements In Vertebrate Genomes?
repeats human written 6.5 years ago by 14134125465346445 • 3.5k • updated 24 months ago by Biostar ♦♦ 20
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817
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Masking repeats in ATAC-seq data
repeats atac-seq deseq written 2.0 years ago by rbronste • 260
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609
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Compare repeat elelemts among species
repeats repeatmasker written 2.1 years ago by qwzhang0601 • 60 • updated 2.1 years ago by genomax ♦ 71k
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how to combine two output of RepeatMasker?
repeats next-gen repeatmasker written 2.1 years ago by kk.mahsa • 100
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get repeats for bacteria and viruses to generate simulated reads of repeats
database viruses simulation bacteria repeats written 2.3 years ago by dabid • 0 • updated 2.2 years ago by Jean-Karim Heriche ♦ 20k
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getDiffExpression.pl in HOMER doesn't seem be working... What am I doing wrong?
homer repeats rna 5-aza rna-seq written 2.6 years ago by ron.eitan • 0 • updated 2.4 years ago by k.balaji93 • 10
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Where are examples of Interspersed repeats?
ministatellite str repeats sequence written 2.4 years ago by veronicaschroeder78 • 110
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Assigning RepeatMasker classes and families to Repbase repeats
repeats repeatmasker repbase written 2.5 years ago by Mike • 30
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1
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1.9k
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1
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Detecting Variants near repeats
vcf repeats bam freebayes written 5.3 years ago by Adrian Pelin • 2.3k • updated 2.5 years ago by Macspider • 2.9k
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Quantification of repeats expression
ngs repeats rna-seq written 2.6 years ago by valerie • 60 • updated 2.6 years ago by Constantine • 240
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10 follow
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How To Mask Repeats In Ngs Data.
repeats next-gen written 7.2 years ago by Daniel • 40 • updated 3.1 years ago by Dattatray Mongad • 320
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Alignment of repeat sequences with Bowtie2
bowtie2 repeats alignment written 3.2 years ago by Bo Sim • 0
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