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<prev • 49 results • page 1 of 2 • next >
2
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1
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4.4k
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6 follow
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Large Variation In Rpkm Values Of Different Biological Replicates From Cufflinks
replicates rpkm cufflinks deseq written 5.5 years ago by hoangtv • 30 • updated 5 days ago by Biostar ♦♦ 20
0
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0
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87
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Single Cell RNA Sequencing - replicates pooling and barcoding
scrna-seq barcode replicates pooling written 23 days ago by Bolesaem • 10
0
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0
answers
69
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0
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Check for variation between two replicates in transcriptome data
replicates statistical test rna-seq written 4 weeks ago by sagardesai91 • 50
1
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1
answer
122
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1
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Handling replicates in Chip-seq
replicates chip-seq written 6 weeks ago by chaudharyc61 • 0 • updated 6 weeks ago by ATpoint ♦ 21k
4
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1
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173
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1
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macs14 replicates treatment and final wiggle peak files
replicates chip-seq macs14 wig-file written 3 months ago by kashiff007 • 70 • updated 3 months ago by geek_y ♦ 9.8k
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0
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284
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Bootstrapping a phylogenetic tree using FastTree
replicates bootstrapping phylogenetics fasttree written 5 months ago by ginohino • 0
0
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0
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131
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0
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Merge MNase-seq bam files from replicates.
replicates mnase-seq merge next-gen bam-files written 5 months ago by kashiff007 • 70
15
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1
answer
551
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5 follow
1
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Analysis Without Replicates
replicates without rna-seq written 8 months ago by stevenmarkgalway • 10
1
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0
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537
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0
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SRA Database: Samples with Multiple Sequencing Runs Per Sample
replicates sra technical replicates written 9 months ago by vlrieg • 10
1
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2
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2.2k
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2
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DESeq2 for differential expression analysis of RNA-seq datawith few samples per condition?
replicates samples deseq2 rna-seq written 3.8 years ago by amyfm • 10 • updated 11 months ago by Biostar ♦♦ 20
7
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2
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1.1k
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8 follow
2
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Replicates for RNA-seq from 1 cell line undergoing different treatments
replicates cell lines rna-seq written 19 months ago by azayob • 0 • updated 14 months ago by BIOTECH.DEEPTI911 • 0
12
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2
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619
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8 follow
2
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How to filter for samples that show good concordance across replicates in DESEQ2 count data from RNA-SEQ?
replicates R deseq2 rna-seq prepde.py written 14 months ago by nancy • 70 • updated 14 months ago by i.sudbery ♦ 5.2k
1
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1
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631
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1
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How to deal with (combine) technical replicates (FPKM vs Read count data) for RNA-Seq experiments?
replicates gene expression read count rna-seq written 17 months ago by Ameya Kulkarni • 0 • updated 17 months ago by Devon Ryan ♦ 91k
10
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2
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8.3k
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9 follow
2
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Why Cannot Limma Package Do Differential Expression Between Two Samples Without Replication?
replicates differential-expression limma affymetrix written 6.2 years ago by shangzhong0619 • 20 • updated 19 months ago by Biostar ♦♦ 20
44
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5
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11k
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12 follow
5
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Rna-Seq Biological Replicates...
replicates gene next-gen rna sequencing written 9.3 years ago by Gregory Miles • 100 • updated 19 months ago by pshubhamoy • 20
0
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0
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1.5k
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Mixed biological and technical replicates in RNAseq differential expression experiment.
replicates experimental design deseq2 rna-seq written 23 months ago by jcrickets • 0
3
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0
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1.6k
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0
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Calling peaks with macs2 if not all replicates have a corresponding input-file
replicates macs2 chip-seq written 2.3 years ago by jklopp • 0 • updated 2.2 years ago by Biostar ♦♦ 20
8
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1
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4.8k
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5 follow
1
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Chips-Seq Replicates And Motif Discovery: What Is The Most Sound Way To Deal With The Merged Peaks (Peak Consensus) ?
replicates chip-seq motif written 5.7 years ago by Nick • 260 • updated 2.7 years ago by Biostar ♦♦ 20
1
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1
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3.7k
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1
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The Purpose Of The Repeat Experiments
replicates snp genotyping written 8.0 years ago by Zhshqzyc • 490 • updated 3.0 years ago by Biostar ♦♦ 20
1
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0
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1.0k
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High in group variability RNA seq
replicates variability rna seq written 3.2 years ago by Biogeek • 350
2
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8
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3.0k
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8
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TMM normalization for RNA seq data with three replicates (2 samples)
replicates edger rna-seq tmm written 3.6 years ago by IrK • 30
0
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1
answer
1.7k
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1
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qRT-PCR analysis : average triplicates for statistical testing
replicates qrt-pcr statistics written 3.7 years ago by Nicolas Rosewick ♦ 8.0k • updated 3.7 years ago by Devon Ryan ♦ 91k
0
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0
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1.4k
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0
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Cell Line gene expression Analysis with multiple replicates
replicates cell line gene expression analysis written 3.9 years ago by hpw9 • 0 • updated 3.7 years ago by Biostar ♦♦ 20
0
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1
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902
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1
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Blog: Benchmarking DGE Tools as a Function of Replicates
deseq dge tools blog rna-seq replicates edger written 4.2 years ago by support • 630 • updated 4.2 years ago by Antonio R. Franco • 4.1k
8
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3
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3.3k
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3
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Differential expression without technical replicates
replicates cufflinks deseq rna-seq expression written 4.2 years ago by jakalssj3 • 80 • updated 4.2 years ago by Gary • 450
1
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1
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3.1k
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1
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DE analysis with [DESeq2] without replicates
replicates time series deseq2 rna-seq written 4.5 years ago by john • 30 • updated 4.4 years ago by kangyueapril • 80
0
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2
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1.9k
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2
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How to merge replicates of mapped reads out of Tophat for pathview and gage analysis.
replicates tophat pathview gage written 5.1 years ago by Parham • 1.4k • updated 4.5 years ago by geek_y ♦ 9.8k
31
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4
answers
8.3k
views
21 follow
4
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ChIP-Seq: Calling peaks with replicates
replicates peak calling chip-seq written 4.9 years ago by dariober ♦ 10k • updated 4.9 years ago by Michele Busby • 2.1k
20
votes
5
answers
17k
views
10 follow
5
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Rnaseq Differential Expression
replicates rna-seq written 7.2 years ago by Ashutosh Pandey ♦ 11k • updated 5.1 years ago by Onat • 0
12
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2
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6.0k
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5 follow
2
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Should the reads of biological replicates be combined for ChIP-seq peak calling?
replicates chip-seq written 5.1 years ago by Ian ♦ 5.5k • updated 5.1 years ago by Chris Fields • 2.1k
<prev • 49 results • page 1 of 2 • next >
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