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<prev • 27 results • page 1 of 1 • next >
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Decontaminate RNASeq data from other cell types?
gene expression rna seq decontamination written 6 weeks ago by pennakiza • 50
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127
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How to Choose PCs from a HeatMap
rna seq single cell written 11 weeks ago by gtasource • 30 • updated 11 weeks ago by Kevin Blighe ♦ 54k
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1
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390
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rna seq single ended -Information on Rseqc report
standedness rna seq rseqc written 12 months ago by ASid • 10 • updated 12 months ago by lshepard • 390
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Downloading single cell data from NCBI
ncbi fastq-dump rna seq single cell written 14 months ago by V • 200
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5 follow
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Atypical volcano plot RNA-seq
unequal sample size deseq2 rna seq volcano-plot written 15 months ago by Teresa • 20 • updated 15 months ago by WouterDeCoster ♦ 43k
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515
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1
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Mapsplice 2 error
ngs data analysis rna seq fusion gene written 18 months ago by amitunited0532 • 10 • updated 18 months ago by EagleEye ♦ 6.6k
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588
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Sort and convert the SAM files to BAM
ngs data analysis samtools rna seq bam sam written 18 months ago by amitunited0532 • 10 • updated 18 months ago by finswimmer ♦ 13k
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5 follow
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STAR options for RNA Seq
star rna seq written 21 months ago by skhan • 10 • updated 21 months ago by swbarnes2 ♦ 7.4k
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miRNA analysis for de novo assembled RNA seq data
mirna prediction rna seq written 2.4 years ago by adil.simply • 0
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to run bowtie on multiple fastq file
rna seq multiple fastq file bowtie written 4.0 years ago by Kritika • 260 • updated 2.8 years ago by Biostar ♦♦ 20
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Comparison of MeDIP data with transcriptomics expression data
medip rna seq written 2.9 years ago by saripalligautam86 • 0
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817
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crossing multiple annotations and validation with RNA-seq
annotation rna seq written 3.0 years ago by guillaume.rbt • 770
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RNA Seq length distribution plot
rna seq distribution plot written 3.0 years ago by HK • 40
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Circos plot for ecoli genome
genomic visualisation circos rna seq written 3.2 years ago by raya.girish • 20
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Number of contigs does not match number in count matrix --- de novo assembly
assembly count matrix rna seq trinity written 3.6 years ago by nikelle.petrillo • 100 • updated 3.5 years ago by Biostar ♦♦ 20
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trinity assembly error, run failed
trinity rna rna seq written 3.8 years ago by nikelle.petrillo • 100 • updated 3.6 years ago by tirza.doniger • 10
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How to determine number of contigs used in Trinity assembly?
trinity de contigs rna seq assembly written 3.6 years ago by nikelle.petrillo • 100 • updated 3.6 years ago by Benn ♦ 7.9k
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using IGV to visualize RNA seq alignment to transcriptome
alignment rna rna seq igv written 3.7 years ago by nikelle.petrillo • 100
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High in group variability RNA seq
replicates variability rna seq written 3.7 years ago by Biogeek • 380
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do i need to run Trinity assembly ALL over?
assembly trininty rna seq written 3.7 years ago by nikelle.petrillo • 100 • updated 3.7 years ago by Chris Fields • 2.1k
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Determining read count
trimmomatic trinity read count rna seq written 3.8 years ago by nikelle.petrillo • 100
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Inconsistencies between RNA Seq and PCR
rna seq interference pcr written 3.9 years ago by Bnf83 • 130 • updated 3.9 years ago by WouterDeCoster ♦ 43k
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Are indel realignment and base recalibration necessary for RNAseq data?
gatk gene expression rna seq tool written 3.9 years ago by Bnf83 • 130 • updated 3.9 years ago by John ♦ 12k
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Question on Trimmomatic Defaults?
trimmomatic trinity rna seq phred written 4.0 years ago by nikelle.petrillo • 100
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Tophat's Mean Inner Distance between Mate Pairs
tophat rna seq written 4.3 years ago by english.server • 200 • updated 4.3 years ago by Brian Bushnell ♦ 17k
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1
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Trimmomatic not able to remove low sequence bases
trimmomatic rna seq written 4.9 years ago by David_emir • 370 • updated 4.9 years ago by rtliu • 2.1k
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Novel Exon Discovery in RNA Seq
exon novel rna seq written 5.2 years ago by andrew.j.skelton73 ♦ 5.9k • updated 5.2 years ago by Pascal • 250
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