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<prev • 9,996 results • page 1 of 334 • next >
229
votes
11
answers
21k
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154 follow
11
answers
Forum: Up-to-date RNA-Seq Analysis Training/Courses/Papers (Dec 2017)
forum papers tutorial rna-seq sequencing written 2.7 years ago by CandiceChuDVM • 1.7k
156
votes
1
answer
41k
views
154 follow
1
answer
Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 3.1 years ago by TriS • 3.4k • updated 14 days ago by skjobs0123 • 0
60
votes
3
answers
18k
views
56 follow
3
answers
Tutorial: Rna-Seq Review Papers
tutorial papers rna-seq written 6.1 years ago by Istvan Albert ♦♦ 77k • updated 2.6 years ago by art.matysik • 0
79
votes
3
answers
15k
views
52 follow
3
answers
Tutorial: Guide to TCGA data
cancer tutorial tcga rna-seq tools clinical written 2.6 years ago by Jordan Anaya • 920 • updated 22 months ago by ewre • 210
93
votes
6
answers
63k
views
60 follow
6
answers
How Much Coverage Do We Need For An Rna-Seq Experiment?
coverage rna-seq written 5.6 years ago by Obi Griffith ♦ 17k
90
votes
7
answers
13k
views
60 follow
7
answers
Forum: Publications for individualized medicine in cancer by whole genome, exome or transcriptome sequencing
next-gen forum rna-seq exome wgs n-of-one written 4.4 years ago by Obi Griffith ♦ 17k
65
votes
8
answers
25k
views
26 follow
8
answers
Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 8.4 years ago by brentp ♦ 22k • updated 3.1 years ago by Malachi Griffith ♦ 16k
115
votes
8
answers
26k
views
41 follow
8
answers
Why Are There Many Rna-Seq Hits To Intronic Regions?
rna-seq written 6.4 years ago by lh3 ♦ 31k • updated 2.5 years ago by Michael Dondrup ♦ 44k
44
votes
2
answers
13k
views
51 follow
2
answers
Tutorial: How To Separate Illumina Based Strand Specific Rna-Seq Alignments By Strand
tutorial rna-seq written 4.6 years ago by Istvan Albert ♦♦ 77k • updated 8 months ago by tangj • 0
59
votes
1
answer
4.3k
views
44 follow
1
answer
Tutorial: Informatics of RNA-Seq.
tutorial next-gen rna-seq written 3.1 years ago by geek_y ♦ 8.7k • updated 2.9 years ago by Malachi Griffith ♦ 16k
53
votes
1
answer
16k
views
33 follow
1
answer
Current state-of-the-art for RNA-Seq gene / transcript expression quantification OR just the tools of preference
bitseq cufflinks salmon kallisto rna-seq written 3.0 years ago by IV • 1.2k
50
votes
3
answers
15k
views
45 follow
3
answers
Tutorial: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
bioconductor fpkm forum rna-seq tutorial written 4.9 years ago by Irsan • 6.7k • updated 7 months ago by lhdcsu • 10
44
votes
0
answers
29k
views
27 follow
0
answers
Tutorial: Visualizing Chip-Seq Data Using Ucsc [Bigwig]
chip-seq tutorial bigwig visualization rna-seq ucsc written 6.4 years ago by Sukhdeep Singh ♦ 9.5k • updated 2.6 years ago by Shicheng Guo • 6.5k
49
votes
0
answers
4.0k
views
37 follow
0
answers
Tutorial: Network plot from expression data in R using igraph
R network tutorial rna-seq microarray written 10 months ago by Kevin Blighe ♦ 28k
125
votes
9
answers
46k
views
66 follow
9
answers
Recommended Tools For Alternative Splicing Detection From Rna-Seq Data
splicing tools rna-seq alternative-splicing written 5.6 years ago by Nicolas Rosewick ♦ 6.6k • updated 5 months ago by kristoffer.vittingseerup • 470
114
votes
4
answers
23k
views
46 follow
4
answers
Why Does Rna-Seq Read Count Fit Poisson Distribution?
modeling rna-seq written 4.9 years ago by sckinta • 460 • updated 4.3 years ago by Ann • 2.2k
96
votes
8
answers
27k
views
33 follow
8
answers
Is Tophat The Only Mapper To Consider For Rna-Seq Data?
tophat bwa rna-seq written 5.7 years ago by Lisa • 300 • updated 3.5 years ago by n124080 • 10
105
votes
4
answers
10k
views
4
answers
Forum: Trimming adapter sequences - is it necessary?
ngs adapter forum rna-seq written 2.0 years ago by Lars • 560 • updated 2.0 years ago by David Langenberger ♦ 8.2k
16
votes
0
answers
5.9k
views
19 follow
0
answers
Tutorial: Rna Seq Experimental Design For Measuring Differential Gene Expression
tutorial rna-seq written 5.6 years ago by Istvan Albert ♦♦ 77k
38
votes
2
answers
69k
views
25 follow
2
answers
Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 5.5 years ago by biorepine • 1.4k • updated 12 months ago by Renesh • 1.3k
28
votes
6
answers
4.2k
views
6
answers
Single Cell RNAseq data analysis protocol
next-gen rna-seq sequencing written 2.2 years ago by Mike • 1.0k • updated 5 months ago by Biostar ♦♦ 20
48
votes
2
answers
4.3k
views
30 follow
2
answers
Tool: Hera: A new tool for RNA-Seq analysis
star gene fusion tool rna-seq kallisto written 14 months ago by sonpham • 350
92
votes
19
answers
29k
views
47 follow
19
answers
Gene Fusion Detection: Rna-Seq Data
fusion next-gen rna-seq sequencing written 6.3 years ago by KS • 340 • updated 23 months ago by aditisk • 0
18
votes
1
answer
17k
views
8 follow
1
answer
Deseq, Edger And Cuffdiff - Different Result
differential expression analysis rna-seq written 6.3 years ago by Nicolas Rosewick ♦ 6.6k • updated 6.1 years ago by Arun ♦ 2.3k
46
votes
5
answers
30k
views
26 follow
5
answers
How Do You Justify Your Rna-Seq Expression Threshold (Fpkm/Rpkm) ?
rpkm fpkm cutoff rna-seq written 5.7 years ago by biorepine • 1.4k • updated 3.3 years ago by Malachi Griffith ♦ 16k
31
votes
2
answers
2.3k
views
23 follow
2
answers
Forum: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 2016?
assembly forum rna-seq 2016 sequencing written 20 months ago by dago • 2.5k
29
votes
3
answers
16k
views
18 follow
3
answers
Best Approach To Predict Novel And Alternative Splicing Events From Rna-Seq Data
splicing expression rna-seq written 5.5 years ago by Sahel • 250 • updated 4.5 years ago by Malachi Griffith ♦ 16k
24
votes
3
answers
12k
views
26 follow
3
answers
Which software do you use for RNA-seq data quality control?
qc quality-control rna-seq written 4.3 years ago by Christian • 2.7k • updated 2.3 years ago by Michael Dondrup ♦ 44k
41
votes
2
answers
17k
views
28 follow
2
answers
Interpreting TCGA .rsem.genes.results and .rsem.genes.normalized_results files.
rna-seq written 4.2 years ago by thisismytest3023 • 150 • updated 3.4 years ago by juara • 10
18
votes
3
answers
8.4k
views
3
answers
RNA-seq: Explain STAR quantMode geneCounts values
star rna-seq differential expression written 23 months ago by williantafsilva • 130 • updated 5 months ago by Tao • 240
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