Showing: rna-seqreset
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153
votes
37
answers
39k
views
154 follow
37
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Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 3.1 years ago by TriS3.4k • updated 12 weeks ago by skjobs01230
228
votes
11
answers
20k
views
154 follow
11
answers
123
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9
answers
46k
views
66 follow
9
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90
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7
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12k
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60 follow
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91
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6
answers
62k
views
58 follow
6
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60
votes
3
answers
18k
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56 follow
3
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Tutorial: Rna-Seq Review Papers
tutorial papers rna-seq written 6.0 years ago by Istvan Albert ♦♦ 77k • updated 2.5 years ago by art.matysik0
43
votes
2
answers
12k
views
51 follow
2
answers
Tutorial: How To Separate Illumina Based Strand Specific Rna-Seq Alignments By Strand
tutorial rna-seq written 4.5 years ago by Istvan Albert ♦♦ 77k • updated 7 months ago by tangj0
78
votes
3
answers
15k
views
50 follow
3
answers
Tutorial: Guide to TCGA data
cancer tutorial tcga rna-seq tools clinical written 2.5 years ago by Jordan Anaya910 • updated 21 months ago by ewre200
92
votes
19
answers
29k
views
47 follow
19
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Gene Fusion Detection: Rna-Seq Data
fusion next-gen rna-seq sequencing written 6.2 years ago by KS340 • updated 22 months ago by aditisk0
114
votes
4
answers
22k
views
46 follow
4
answers
Why Does Rna-Seq Read Count Fit Poisson Distribution?
modeling rna-seq written 4.8 years ago by sckinta460 • updated 4.2 years ago by Ann2.2k
50
votes
3
answers
15k
views
45 follow
3
answers
Tutorial: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
bioconductor fpkm forum rna-seq tutorial written 4.8 years ago by Irsan6.7k • updated 6 months ago by lhdcsu10
59
votes
1
answer
4.2k
views
44 follow
1
answer
Tutorial: Informatics of RNA-Seq.
tutorial next-gen rna-seq written 3.0 years ago by geek_y8.7k • updated 2.8 years ago by Malachi Griffith16k
115
votes
8
answers
26k
views
41 follow
8
answers
Why Are There Many Rna-Seq Hits To Intronic Regions?
rna-seq written 6.3 years ago by lh331k • updated 2.4 years ago by Michael Dondrup44k
47
votes
0
answers
3.3k
views
35 follow
0
answers
96
votes
8
answers
26k
views
33 follow
8
answers
Is Tophat The Only Mapper To Consider For Rna-Seq Data?
tophat bwa rna-seq written 5.6 years ago by Lisa300 • updated 3.4 years ago by n12408010
53
votes
1
answer
16k
views
33 follow
1
answer
48
votes
2
answers
4.2k
views
30 follow
2
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29
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7
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14k
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28 follow
7
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41
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2
answers
17k
views
28 follow
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Interpreting TCGA .rsem.genes.results and .rsem.genes.normalized_results files.
rna-seq written 4.1 years ago by thisismytest3023150 • updated 3.3 years ago by juara10
44
votes
0
answers
29k
views
27 follow
0
answers
Tutorial: Visualizing Chip-Seq Data Using Ucsc [Bigwig]
chip-seq tutorial bigwig visualization rna-seq ucsc written 6.3 years ago by Sukhdeep Singh9.4k • updated 2.6 years ago by Shicheng Guo6.1k
65
votes
8
answers
24k
views
26 follow
8
answers
Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 8.3 years ago by brentp22k • updated 3.0 years ago by Malachi Griffith16k
45
votes
5
answers
30k
views
26 follow
5
answers
How Do You Justify Your Rna-Seq Expression Threshold (Fpkm/Rpkm) ?
rpkm fpkm cutoff rna-seq written 5.6 years ago by biorepine1.4k • updated 3.2 years ago by Malachi Griffith16k
24
votes
3
answers
11k
views
26 follow
3
answers
Which software do you use for RNA-seq data quality control?
qc quality-control rna-seq written 4.2 years ago by Christian2.6k • updated 2.2 years ago by Michael Dondrup44k
60
votes
5
answers
24k
views
25 follow
5
answers
Should We Remove Duplicated Reads In Rna-Seq ?
read rna-seq written 5.8 years ago by siddharth.sethi5200 • updated 4.7 years ago by earonesty200
37
votes
2
answers
68k
views
25 follow
2
answers
Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 5.4 years ago by biorepine1.4k • updated 11 months ago by Renesh1.3k
37
votes
1
answer
4.0k
views
25 follow
1
answer
PCA plot from read count matrix from RNA-Seq
pca rna-seq written 9 months ago by rachel.kubik1220 • updated 5 months ago by a.archana0
30
votes
4
answers
33k
views
24 follow
4
answers
Best Way To Normalize Rna-Seq Data For Expression Profiling
normalization rna-seq written 4.7 years ago by ajc8120 • updated 3.2 years ago by Amitm1.5k
21
votes
5
answers
4.7k
views
23 follow
5
answers
To What Degree Could We Determine Whether A Gene Is Expressed?
fpkm rna-seq written 4.5 years ago by liupfskygre180 • updated 3.5 years ago by cankutcubuk170
31
votes
2
answers
2.2k
views
23 follow
2
answers
24
votes
1
answer
13k
views
22 follow
1
answer
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