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<prev • 10,942 results • page 1 of 365 • next >
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Automating Trimmomatic for total Noobs
rna-seq written 3 hours ago by new15b • 0 • updated 2 hours ago by swbarnes2 ♦ 4.8k
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Job: Principal/Sr Principal Scientist, bioinformatics
genome next-gen chip-seq job rna-seq written 2 hours ago by Katja • 0 • updated 2 hours ago by Medhat ♦ 8.1k
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GO annotation file for hsa genes
database go rna-seq written 5 hours ago by wsciekly.maciek • 0
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5 follow
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A list of human cell cycle genes for Seurat
rna-seq cell cycle single cell written 9 hours ago by Pestudkaru • 20 • updated 6 hours ago by Shicheng Guo • 7.4k
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fastx_reverse_complement truncating files?
reverse compliment fastx rna-seq written 18 hours ago by danielle.miyagishima • 0 • updated 7 hours ago by ATpoint ♦ 13k
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Extract genomic coverage of specific regions from bam file
alignment rna-seq written 1 day ago by wsciekly.maciek • 0
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126
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5 follow
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Splice site usage from RNA-seq data
splicing database rna-seq written 1 day ago by Suicyte • 0
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Is possible to recreate RNASeq count dataset from a dataset normalized with FPKM ?
fpkm rna-seq written 11 hours ago by elmahy2005 • 30 • updated 9 hours ago by h.mon ♦ 23k
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News: Gene set enrichment and pathway analysis in HT data
news next-gen rna-seq sequencing written 11 hours ago by carlopecoraro2 • 840
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Gene functional annotation from Cuff diff out
cufflinks rna-seq datanalyisi sequencing written 12 hours ago by bioz • 0
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How to merge read count of multiple sample in one fiel to be used for DESeq2 fold change study?
alignment next-gen rna-seq sequencing written 14 hours ago by Neu • 10
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Can NanoString ncounter miRNA data be analyzed with RNA-Seq tools?
R rna-seq written 1 day ago by myguestp • 0
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A weird PCA result using a local Galaxy
galaxy pca rna-seq principal component analysis written 17 hours ago by Gary • 450 • updated 15 hours ago by Devon Ryan ♦ 88k
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what is the best method (normalization) to compare RNA-Seq samples from different labs
normalization compare rna-seq tmm written 19 hours ago by RS • 0 • updated 16 hours ago by Dattatray Mongad • 240
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how to find RT- qPCR data for perticular SEQC RNA-seq data set?
genome next-gen rna-seq written 17 hours ago by k.kathirvel93 • 180
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How to compare samples between two different platforms?
R correlation microarray rna-seq written 1 day ago by newbie • 20
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48
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Counting number of base pairs and features in each bed file
ngs rna-seq written 1 day ago by Ron • 870
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102
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Aligning using hg18
annotation alignment hg18 rna-seq written 1 day ago by lamia_203 • 30 • updated 1 day ago by h.mon ♦ 23k
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Identify adapter sequences for trimming from Illumina paired end fastq files
adapter trimming fastq qc rna-seq written 1 day ago by mohammedtoufiq91 • 0 • updated 1 day ago by benformatics • 490
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RSEM: transcripts.fa.grp not found (should it have been generated?)
rna-seq rsem written 2 days ago by jhanks1981 • 0
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how to convert a list of genes to BED file?
gene rna-seq written 1 day ago by danit.twito • 0
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TCGA data base normalization
rna-seq written 1 day ago by safa.azar • 0
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Genome Annotations? RepeatMasker class/family? Regulation?
annotation ngs rna-seq repeatmasker written 1 day ago by Susmita Mandal • 20
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5 follow
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for low coverage RNAseq how many reads assigned is the bare minimum for differential gene expression analysis
rna-seq written 2 days ago by senowinski • 30
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6 follow
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DEseq three-group comparison
deseq differential expression analysis rna-seq written 8 months ago by duvaller • 10 • updated 1 day ago by sdbaney • 0
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125
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Salmon Counts differ in Alignment and Quasi-Mapping mode
alignment salmon rna-seq written 2 days ago by MaxF • 10
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5 follow
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Detecting expression in intergenic regions
bedtools genome rna-seq written 15 months ago by A. Domingues • 1.8k
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input for rMATS
rmats star rna-seq written 12 months ago by bisht20diksha • 10 • updated 2 days ago by iti.gupta • 0
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Paired end sequencing with different read length: better to trim everything to a short length or use long single end
alternative splicing rna-seq read length written 16 months ago by Lalla • 40 • updated 2 days ago by iti.gupta • 0
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fgsea tutorial issue with BiocParallel
R rna-seq written 7 months ago by krushnach80 • 460 • updated 2 days ago by mark.ziemann • 1.1k
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