Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing selected topics • reset
or   Classic search
<prev • 14,762 results • page 1 of 493 • next >
1
vote
1
answer
47
views
1
answer
EdgeR matrix design and comparisons for paired samples
rna-seq edger written 12 hours ago by silas008 • 130 • updated 1 hour ago by h.mon ♦ 30k
0
votes
1
answer
25
views
1
answer
MAGeCK vs MWU CRISPR Screen Tests
analysis rna-seq statistics written 4 hours ago by Scott McKay • 20 • updated 3 hours ago by dsull • 1.5k
0
votes
0
answers
32
views
0
answers
can't run Aracne -- Java error
network rna-seq aracne written 4 hours ago by rioualen • 410
1
vote
0
answers
37
views
0
answers
FastqToSam (Picard) syntax paired-end reads
rna-seq sequencing written 9 hours ago by esteban.peguero • 0 • updated 8 hours ago by h.mon ♦ 30k
0
votes
1
answer
31
views
1
answer
GSVA example leukemia returns a 'NULL' object
gsva rna-seq written 21 hours ago by mbk0asis • 550 • updated 11 hours ago by Kevin Blighe ♦ 63k
2
votes
0
answers
60
views
0
answers
Trouble with choosing the right reference transcriptome file for mm10
genome salmon kallisto rna-seq sequencing written 18 hours ago by wyoo083 • 0
0
votes
1
answer
200
views
1
answer
Normalization for comparing expression statistics across sample and gene groups
normalization gene sets rna-seq written 4 months ago by endre.sebestyen • 10 • updated 20 hours ago by kristoffer.vittingseerup • 3.4k
0
votes
0
answers
40
views
0
answers
Construct Heatmap and Cut Clusters
R rna-seq written 20 hours ago by pthom010 • 0
1
vote
1
answer
162
views
1
answer
How to split SAM file to different chromosomes
assembly rna-seq written 3 months ago by javanokendo • 0 • updated 1 day ago by Biostar ♦♦ 20
1
vote
1
answer
136
views
8 follow
1
answer
Create table of gene expression for multiple samples
hisat stringtie rna-seq written 1 day ago by microbiotaiota • 10 • updated 1 day ago by Kevin Blighe ♦ 63k
0
votes
1
answer
663
views
1
answer
GSVA on enrichment scores about R project
R gsva rna-seq written 15 months ago by 1466956114 • 0 • updated 1 day ago by DBScan • 20
2
votes
1
answer
227
views
1
answer
Recommendation for packages for cell type deconvolution from bulk RNAseq data?
deconvolution rna-seq cell type written 11 weeks ago by bioinfouser • 70 • updated 1 day ago by xinyiy027 • 0
4
votes
1
answer
92
views
1
answer
EdgeR and contrasts: How to compare with a group not in the model
R makecontrasts model.matrix rna-seq edger written 2 days ago by 13530213 • 10
0
votes
1
answer
42
views
1
answer
Gene expression variability
gene next-gen rna-seq written 1 day ago by reara • 10 • updated 1 day ago by Nicolas Rosewick ♦ 9.0k
0
votes
1
answer
93
views
1
answer
Heatmap for gene expression
R rna-seq sequencing written 2 days ago by akashagri19 • 0
1
vote
1
answer
50
views
1
answer
PCA loadings/roation : different variables depending on the code
factominer loading pca rna-seq prcomp written 1 day ago by camillab. • 10 • updated 1 day ago by Kevin Blighe ♦ 63k
1
vote
1
answer
62
views
1
answer
Is it feasible to look for mutations in RNA-seq data from FFPE samples?
gene R rna-seq snp written 1 day ago by danson.wooi • 0
0
votes
0
answers
49
views
0
answers
star --readFilesIn error when using unmapped.out.mate1/2 files
star rna-seq written 1 day ago by kokoko • 0
1
vote
1
answer
71
views
1
answer
Heatmap with VST Normailzed Data
R rna-seq written 1 day ago by pthom010 • 0
0
votes
0
answers
48
views
0
answers
Paired Testing in EdgeR: Addressing patient specific response (in only one patient)
paired_testing rna-seq edger R written 1 day ago by accio • 0
1
vote
1
answer
69
views
1
answer
How should I analyze the following dataset (GSE150847)?
R bioconductor rna-seq written 2 days ago by arjuncsubra • 0
4
votes
4
answers
165
views
6 follow
4
answers
RNA-Seq differential gene expression without biological and technical replicates.
rna-seq written 21 days ago by utsafar • 40 • updated 2 days ago by a410638758 • 0
1
vote
0
answers
42
views
0
answers
determining read-depth of given size of genomic window via samtools
read-depth next-gen samtools rna-seq written 2 days ago by ella • 0
5
votes
1
answer
78
views
1
answer
Which is the best approach to get DEG across one condition, in a three-factor design experiment?
rna-seq edger written 2 days ago by antonioggsousa • 860 • updated 2 days ago by Devon Ryan ♦ 96k
1
vote
2
answers
862
views
2
answers
How to do GO annotation with non-model animal
rna-seq written 2.6 years ago by jiang_lan • 0 • updated 2 days ago by Biostar ♦♦ 20
2
votes
1
answer
44
views
1
answer
Using GOplot with data from Gene Ontology Resource
R rna-seq written 2 days ago by basch • 0 • updated 2 days ago by jkkbuddika • 50
0
votes
1
answer
63
views
1
answer
Error with Rseqc infer_experiment - unknown datatype
rseqc inferexperiment rna-seq gtf2bed written 2 days ago by newbie • 70
5
votes
1
answer
66
views
1
answer
HISAT2 Alignment Result
next-gen rna-seq written 3 days ago by akashbala0 • 10
4
votes
2
answers
102
views
2
answers
Odd Fastq sequences; 50% Aligned more than once
assembly sequence rna-seq alignment written 3 days ago by pjferrandi • 0
0
votes
0
answers
64
views
0
answers
How to extract reads on positive strand for a specific region from bam?
samtools rna-seq strand counts written 2 days ago by venkat • 0
<prev • 14,762 results • page 1 of 493 • next >
Recent Votes
Recent Locations • All »
  • University of Maryland, 9 minutes ago
  • United States, 13 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 700 users visited in the last hour