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<prev • 302 results • page 1 of 11 • next >
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Using augustus gene model gff as STAR input
gff genemodels rna-seq genemodel written 37 minutes ago by hydra_questions • 20
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how to find consensus modules between 2 datasets by different platform through WGCNA
wgcna microarray rna-seq consensus module written 4 hours ago by modarzi • 140
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how to identify where multi-mappers, or "non primary hits" are mapping to
alignment next-gen rna-seq written 6 hours ago by bertb • 10
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55
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Interpretation of two PCA plots
pca rna-seq clustering written 7 hours ago by newbie • 90 • updated 7 hours ago by swbarnes2 ♦ 8.9k
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How to convert affymetrix HG-U133_Plus_2 to gene symbol?
R rna-seq written 7 hours ago by acco.per.registrazioni • 0 • updated 7 hours ago by JC ♦ 11k
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correlation of genes
correlation rna-seq written 7 hours ago by adR • 40 • updated 7 hours ago by JC ♦ 11k
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Strandness setting for HISAT2 : BGI sequencing platform
rna-seq hisat2 written 1 day ago by venura • 60 • updated 10 hours ago by genomax ♦ 91k
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The meaning of junction & exon length in rMATS paper
rna-seq alternative splicing written 10 hours ago by Andrew Liu • 0
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From Cuffdiff Output to CummeRbund analysis/visualisation
R next-gen rna-seq written 5.0 years ago by Wet&DryImmunology • 220 • updated 11 hours ago by Biostar ♦♦ 20
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FeatureCounts with scRNA-seq
rna-seq written 22 hours ago by fuhaolll2 • 0 • updated 14 hours ago by ATpoint ♦ 40k
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Ensmble ids to gene names in SNPEff output VCF file
snp rna-seq written 14 hours ago by tayyabaalvi82 • 0
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80
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Design in DESEQ2
R rna-seq written 3 days ago by hydrobeanz • 0 • updated 1 day ago by biostar • 10
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Is it possible to look at gene-level expression using DEXseq?
dexseq rna-seq written 1 day ago by dan • 0
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6 follow
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Publicly Available RNA-Seq Datasets from Human Heart
rna-seq cardiomyocytes heart written 1 day ago by biogrin • 0 • updated 1 day ago by Jeremy Leipzig ♦ 19k
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Sleuth Error in forderv/ Failed to allocate TMP or UGRP or they weren't cache line aligned: nth=12
R sleuth kallisto rna-seq written 1 day ago by mbartl13 • 0 • updated 1 day ago by ATpoint ♦ 40k
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Detection of Novel splice events
alignment rna-seq written 1 day ago by Nelislam4 • 20
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56
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Pooling WT and CRISPR/Cas9 KOs cells in the same scRNAseq sample and then demultiplex by puromycin resistance cassette expression
crispr-cas9 scrnaseq rna-seq written 1 day ago by Francesco • 10
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Sort Me RNA newest version no databases
software error rna-seq written 7 weeks ago by storm1907 • 0 • updated 1 day ago by Biostar ♦♦ 20
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86
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2
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Deseq2 Biological replicates
deseq2 rna-seq written 3 days ago by benoit.j.kunath • 0
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How to deal with single nucleus data in Seurat
single nucleus rna sequencing rna-seq seurat written 1 day ago by bellymountain • 0
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Having made a paired-end and stranded-forward sequencing (NGS) implies that I will only get positive reading frames?
assembly transcriptome rna-seq illumina written 2 days ago by sofiablancoglez • 0
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Color code samples
R seurat rna-seq written 27 days ago by roberts • 0 • updated 1 day ago by Biostar ♦♦ 20
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68
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Assessment of the genome assembly
genome assembly sequence rna-seq gene written 1 day ago by guliasitu40 • 70
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5 follow
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From accession ID to phylum taxid
rna-seq written 2 days ago by doinelpierrot • 0 • updated 1 day ago by shenwei356 ♦ 5.5k
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35
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Trouble finding exons in DEXseq
dexseq R rna-seq sequencing written 2 days ago by dan • 0
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PCA on exon count data
R splicing rna-seq written 2 days ago by graeme.thorn • 50
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STAR aligner - multimaps vs. strandedness
ribosome profiling alignment star rna-seq riboseq written 2 days ago by cjag • 0
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PolyA selection for transcriptome sequencing
assembly sequence rna-seq sequencing written 3.6 years ago by Mehmet • 600 • updated 2 days ago by Biostar ♦♦ 20
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1
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Find read distribution over every gene in RNA-seq
python rna-seq written 2 days ago by Shred • 220 • updated 2 days ago by Istvan Albert ♦♦ 85k
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48
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Normalization on protein ID duplicates
next-gen rna-seq written 3 days ago by jumagarilla • 0
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