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<prev • 242 results • page 1 of 9 • next >
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Analysis Without Replicates
replicates without rna-seq written 1 hour ago by stevenmarkgalway • 0 • updated 53 minutes ago by Kevin Blighe ♦ 33k
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15
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DESeq2 design formula: how to use the opposite interaction term?
deseq2 rna-seq written 1 hour ago by salamandra • 170
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5 follow
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kallisto + sleuth: no results
R sleuth kallisto rna-seq written 16 months ago by stephanie.devos • 0 • updated 2 hours ago by gilbo • 10
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1
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104
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1
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sra toolkit prefetch: path not found while resolving tree within virtual file system module
prefetch sra toolkit rna-seq written 21 days ago by gilbo • 10
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2
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167
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2
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Obtaining GSM numbers from SRA ids
sra rna-seq written 12 weeks ago by Dirk • 60 • updated 7 hours ago by Biostar ♦♦ 20
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88
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what are the rules to simulate an Intermediate specimen ?
rna-seq written 19 hours ago by biostar.anon • 0
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93
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2
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Do STAR genome index and RSEM reference need to be from same files?
rna-seq rsem star written 1 day ago by prabin.dm • 10 • updated 1 day ago by WouterDeCoster ♦ 35k
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Tool: Discovering protein-lncRNA interactions from large-scale CLIP-Seq and TCGA Cancer datasets
tool cancer rna-seq clip-seq rbp lncrna written 3.9 years ago by lsp03yjh • 700
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70
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use entrez direct
rna-seq written 1 day ago by 1499265453 • 0
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102
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5 follow
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High no feature counts in ht-seq counts
rna-seq sequencing written 1 day ago by eozcan • 0 • updated 1 day ago by h.mon ♦ 21k
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102
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Are my methods correct?
genome rna-seq snp written 2 days ago by ishmahe16 • 0 • updated 2 days ago by WouterDeCoster ♦ 35k
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70
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How to download/build GRCh37.EBVB95-8wt.ERCC genome / include spike-in genome
genome sequence rna-seq written 2 days ago by Mike • 1.1k
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htseq-count SAM Processing error "can't decode byte 0xa7"
rna-seq written 2 days ago by Glubbdrubb • 0 • updated 2 days ago by Bastien Hervé • 2.6k
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How to meassure transcript expression from Oxford nanopore sequencing data
transcript expression rna-seq nanopore written 2 days ago by caggtaagtat • 380 • updated 2 days ago by WouterDeCoster ♦ 35k
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141
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5 follow
1
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Problem with fastq file
rna-seq written 2 days ago by kamoltip.lao • 0
3
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1
answer
83
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1
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geneontology.org GO annotations no longer present
genome next-gen rna-seq sequencing written 2 days ago by brismiller • 10 • updated 2 days ago by Philipp Bayer ♦ 5.8k
1
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1
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82
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What is the reason for big difference in DEGs estimation compared to previous estimation?
tophat degs rna-seq written 2 days ago by anc.informatics • 0 • updated 2 days ago by jared.andrews07 • 1.6k
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77
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Krona vs MEGAN for metagenomic data
rna-seq written 2 days ago by CC • 20
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93
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DGE Analysis between 3 conditions
deseq rna-seq edger written 2 days ago by prabin.dm • 10
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78
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small FASTa file from genome guided trinity assembly?
assembly genome guided trinity rna-seq written 2 days ago by bsly • 0
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826
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miRNA Target Site prediction from unpaired data
mrna rna-seq mirna written 2.7 years ago by hAjmal • 30 • updated 3 days ago by Biostar ♦♦ 20
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no input BAM records found in ./tophat_out_SRR5481725/tmp/right_kept_reads.m2g_um.candidates15.bam (possibly due to wrong offset)
software error rna-seq written 3 days ago by ALI Hkz • 0 • updated 3 days ago by Pierre Lindenbaum ♦ 115k
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44
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TopGO Error in .local(.Object, ...) : allGenes must be a factor with 2 levels
R topgo rna-seq written 3 days ago by jomagrax • 0
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1
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64
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1
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Using DAVID as a beginner
rna-seq written 3 days ago by SylviaR • 0
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84
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HISAT2 installation error
rna-seq written 3 days ago by aswanikrishnap1994 • 0 • updated 3 days ago by finswimmer ♦ 7.7k
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63
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1
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MAQ install error
software error next-gen snp rna-seq written 3 days ago by Ashley • 10 • updated 3 days ago by h.mon ♦ 21k
10
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1
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160
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6 follow
1
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STAR alignment error: ERROR in input reads
fastq star rna-seq written 3 days ago by prabin.dm • 10
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105
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reliability for the usage of merged GTF from tophat-cufflinks as an novel annotation?
cufflinks mats rna-seq alternative splicing written 7 weeks ago by thindmarsmission • 0 • updated 3 days ago by Biostar ♦♦ 20
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Best software to use to annotate a .bam file? How to map to multiple references when first output is .bam?
mirbase mirna-seq rna-seq written 3 days ago by agm123 • 0
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Tophat problem - R1 and R2 reads mapped to different strandeds of viral genome
software error alignment rna-seq written 8 days ago by WZOUXM • 10 • updated 3 days ago by Charles Warden ♦ 5.7k
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