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<prev • 284 results • page 1 of 10 • next >
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Surrogate variable analysis: ask for a practical example
sva rna-seq written 39 minutes ago by Mozart • 40
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1
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817
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1
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varianceStabilizingTransformation() of FPKM data, count data unavailable
R rna-seq written 2.2 years ago by KRR • 0 • updated 2 hours ago by Biostar ♦♦ 20
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how to interpret NES(normalized enrichment score)?
gene R rna-seq written 7 hours ago by ghmdsr • 0 • updated 5 hours ago by h.mon ♦ 13k
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differential expression pattern of different isoforms of a gene
expression isoforms rna-seq written 1 day ago by genesneuro • 10
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1
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Question about which option should I choose (reversely stranded or forward stranded)
counts rna-seq sequencing written 9 hours ago by kamel • 0
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43
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1
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error in star
rna-seq written 10 hours ago by yueli7 • 10 • updated 10 hours ago by genomax ♦ 46k
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52
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1
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pooling reads for error correction
assembly preprocessing error correction rna-seq written 15 hours ago by ilya239 • 10 • updated 11 hours ago by h.mon ♦ 13k
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1
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Problem with Tophat / Bowtie pipeline
software error rna-seq written 6 days ago by tebb • 0 • updated 12 hours ago by zx8754 ♦ 4.1k
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77
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RefSeq transcripts *.rna.fna.gz files
sequence rna-seq written 12 hours ago by seqall • 0
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51
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Count reads from isoforms in RNA-seq data
next-gen isoforms rna-seq splice variants written 14 hours ago by nicanicagm • 0 • updated 14 hours ago by h.mon ♦ 13k
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errors in newCellDataSet Monocle function
single cell rna-seq written 15 hours ago by jonessara770 • 60
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Questions about quantifying mRNA data
gene count expression rna-seq written 18 hours ago by kamel • 0
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2
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61
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2
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mRNA to protein
fasta bioinformatics translation protein rna-seq written 18 hours ago by Xylanaser • 10 • updated 17 hours ago by h.mon ♦ 13k
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How to calculate distribution of mapped read over classes of RNA?
chip-seq rna-seq written 7 days ago by biplab • 40 • updated 17 hours ago by debitboro • 70
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Intron cordinates requires for known exons
introns exons rna-seq written 18 hours ago by HK • 20
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84
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1
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multi-mapped reads counting methods with RNA-seq
gene count expression rna-seq written 19 hours ago by guillaume.rbt • 370
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68
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Plot stranded RNA-seq data at gene level
rna-seq written 20 hours ago by boludopublico • 0
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1
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56
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1
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Choosing the best trendline option for biological data?
R protein rna-seq abundance written 21 hours ago by BIOAWY • 0 • updated 20 hours ago by Devon Ryan ♦ 78k
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96
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RNA-Seq identify stably expressed genes
rna-seq dge written 22 hours ago by rmf • 250
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6 follow
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STAR align multiple files
alignment chip-seq star rna-seq written 6 months ago by ta_awwad • 120 • updated 22 hours ago by Bog • 10
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1
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eRNA from RNASeq data
rnaseq enhancer rna rna-seq written 23 hours ago by giorgio.giurato • 0
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is it necessary to normalize between a Paired-End and Single-End library?
normalization chip-seq rna-seq written 22 hours ago by Zee_S • 0
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62
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Deseq2 batch effect design issue
R rna-seq written 1 day ago by krushnach80 • 280 • updated 1 day ago by JJ • 220
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Tophat output problem
genome alignment rna-seq sequencing written 1 day ago by amitunited0532 • 0 • updated 1 day ago by WouterDeCoster ♦ 27k
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sRNA data mapping to Rfam to find non coding RNA
rna-seq written 10 weeks ago by vikasdahiya03 • 0 • updated 1 day ago by Biostar ♦♦ 20
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How can I classify circRNA as exonic, intronic or intergenic from the output of find_circ
circrna rna-seq written 2 days ago by tofazzal.stat • 0
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Clarification on how DSEeq2 Dispersion Curve is Generated
gene correction deseq2 dispersion rna-seq written 1 day ago by brismiller • 10 • updated 1 day ago by Kevin Blighe ♦ 17k
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1
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Candida albicans gene counts
rna-seq written 1 day ago by zad5zad • 0 • updated 1 day ago by h.mon ♦ 13k
8
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96
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5 follow
1
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remove rrna from rna seq
rna-seq written 1 day ago by yueli7 • 10
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News: 5-day Epigenomics Workshop in Berlin. Deadline
news chip-seq rna-seq sequencing written 1 day ago by carlopecoraro2 • 650
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