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Job: Bioinformatics Engineer (6 months) in Clinical Bioinformatics, Curie Institute, Paris, France
next-gen job rna-seq gene panel written 2 hours ago by victor.renault • 0
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33
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only one biological read present in fastq NCBI database for paired-end sequencing
rna-seq written 3 hours ago by Matt • 0 • updated 3 hours ago by ATpoint ♦ 44k
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Calculate Allele balance by sample
allele balance snp rna-seq written 4.8 years ago by kirannbishwa01 • 1.3k • updated 3 hours ago by ashotmarg2004 • 10
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htseq-count error: "does not contain 'gene_id'
htseq-count rna-seq written 4.6 years ago by lynne.m.a.harris • 30 • updated 9 hours ago by eennadi • 0
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Comparing gene set enrichment across 3+ conditions?
rna-seq gsea written 13 days ago by penny.lane • 10 • updated 10 hours ago by Elucidata • 10
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how to interpret htseq output
gene assembly alignment rna-seq sequencing written 13 hours ago by javad.sadeghi1 • 0 • updated 12 hours ago by rpolicastro ♦ 3.2k
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How to get the normalized counts matrix EDASeq ?
normalization within lane normalization rna-seq written 3.9 years ago by debitboro • 190 • updated 13 hours ago by 1206035926 • 0
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GSEA Chip Annotations
gsea enrichment analysis rna-seq written 22 hours ago by natasha.tilich • 10
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How to determine SC-RNA-SEQ QC filter thresholds in Seurat?
R rna-seq seurat written 4 days ago by dlmatera • 10
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Why my normalization failed?
R rna-seq written 1 day ago by Omar Mohamed • 0 • updated 1 day ago by i.sudbery ♦ 10k
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Running GSVA using open source RNA seq data
gene R tutorial gsva rna-seq written 1 day ago by jacobelnaggar • 0
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6 follow
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type='apeglm' shrinkage only for use with 'coef'
R rna-seq written 6 months ago by wuyingncu • 10 • updated 1 day ago by ATpoint ♦ 44k
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cellranger count error "Your reference does not contain the expected files, or they are not readable. Please check your reference folder on n145"
rna-seq written 4 days ago by leranwangcs • 0 • updated 1 day ago by ylws2201 • 0
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clusters with no enrichment?
rna-seq written 1 day ago by demoraesdiogo2017 • 40
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Homolog-level DGE analyses - what to consider?
deseq2 rna-seq differential gene expression written 2 days ago by ponganta • 50
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50
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What does CHR_HG126_PATCH stand for?
chip-seq rna-seq written 2 days ago by enora.giffard • 0 • updated 2 days ago by Kevin Blighe ♦ 69k
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should each RNA-seq has Circular RNA?
ciri2 alignment circular rna rna-seq written 2 days ago by modarzi • 140
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GSEA from broad institute normalization method
rna-seq written 2 days ago by Rob • 30 • updated 2 days ago by Kevin Blighe ♦ 69k
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RNA Seq V2 RSEM Data
rna-seq written 18 months ago by archana.katta9000 • 0 • updated 2 days ago by Biostar ♦♦ 20
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Segmentation fault (core dumped) error with bigWigAverageOverBed
bigwigaverageoverbed rna-seq written 2 days ago by camelest • 10
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Design Matrix with EdgeR or DESeq2
deseq2 edger rna-seq written 2 days ago by reui879 • 10 • updated 2 days ago by i.sudbery ♦ 10k
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RNA-Seq, HTSeq-Counts, counts are ~1M less compared to the reference research paper
htseq-count sequence rna-seq written 3 days ago by xytwwwww • 0
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Error, cannot determine column index for replicate name
de_analysis rna-seq written 3 days ago by Giovy • 0 • updated 3 days ago by Kevin Blighe ♦ 69k
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Stringtie transcripts to Gene Name
R rna-seq assembly written 3 days ago by shrivadeepak • 0
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comment for trimm data
next-gen rna-seq sequencing written 3 days ago by askari.arezou94 • 30 • updated 3 days ago by sarireenjuriya1 • 0
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Missing value imputation for bulk RNA-seq data - which tool to use?
missing data imputation missing values rna-seq nas written 3 days ago by joker33 • 30
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8 follow
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RNA-Seq or Exome Seq for Clinical data analysis
exome next-gen rna-seq sequencing written 3.4 years ago by Karma • 300
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How to extract genes from goana
R rna-seq written 3 days ago by sgallaher03 • 0 • updated 3 days ago by Gordon Smyth • 2.1k
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Error in stop_if_wrong_length(what, ans_len)
R rna-seq written 3 days ago by amirnavidinia2014 • 0 • updated 3 days ago by Pierre Lindenbaum ♦ 133k
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Getting all the genomic coordinates where RNA-seq reads are split within a given genomic interval in a bam file
reads cigar splicing bam rna-seq written 3 days ago by rubic • 200 • updated 3 days ago by Pierre Lindenbaum ♦ 133k
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