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<prev • 71 results • page 1 of 3 • next >
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RNA-Seq MAplot deviation problem in deseq2
next-gen rna-seq written 12 hours ago by Grace_G • 0
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How does monocle identify the begging of pseudotime?
scrna-seq rna velocity cell trajectory rna-seq written 19 hours ago by popantrop • 20
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How calculate CG content for each contig in an transcript assembly?
cg content assembly contig rna-seq transcriptome written 3 days ago by luzglongoria • 0 • updated 21 hours ago by Vijay Lakhujani ♦ 3.5k
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In Seurat, what data is VlnPlot() plotting?
scrna-seq seurat rna-seq single cell written 1 day ago by Kristin Muench • 350
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RNA-Seq with 4 conditions - Analysis design choice with DESeq2
R rna-seq written 1 day ago by lu.ne • 50
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81
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Classification using publicly available RNA-seq dataset
classification machine learning rna-seq written 1 day ago by bioinfraML • 0
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Any database for downloading cancer cell-lines transcriptome differential expressed gene (DEG) list? (Normal vs cancer cell-lines)
database cancer microarray deg rna-seq written 9 days ago by chiefcat • 70 • updated 1 day ago by Joseph Hughes • 2.6k
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RNA-Seq database of cancer patients other than TCGA and ICGC?
patient rna-seq cancer written 8 days ago by thejustpark • 60 • updated 1 day ago by Pappu • 1.8k
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116
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Perturbation Cancer cell line data
gene cytotoxics rna-seq cancer written 3 days ago by jmannhei • 0 • updated 1 day ago by Pappu • 1.8k
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Bowtie2 mapped just 50% of the reads
rna-seq written 1 day ago by silas008 • 70
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Cleaning the expression matrix for the purpose of deconvolution of RNA-Seq data
deconvolution preprocessing rna-seq written 1 day ago by jane.merlevede • 10 • updated 1 day ago by Kevin Blighe ♦ 35k
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Pick soft threshold for co-expression analysis and filtering step
wgcna network coexpression rna-seq R written 1 day ago by Biologist • 130 • updated 1 day ago by Kevin Blighe ♦ 35k
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Strand-Specific Rna-Seq Data For Maqc Samples?
data sequence rna-seq strand written 6.7 years ago by Tianyang Li • 490 • updated 1 day ago by sergisayolspuig • 0
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Best tool for Chimeric Transcript Analysis?
ngs chimeric fusion wts rna-seq written 1 day ago by esraesmeray1990 • 10 • updated 1 day ago by guillaume.rbt • 490
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5 follow
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How to speed up trimming using trim galorer
fastq rna-seq trim written 2 days ago by lamia_203 • 30 • updated 1 day ago by mbk0asis • 400
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News: 3rd Berlin Summer School in NGS Data Analysis
ngs dna-seq news rna-seq written 1 day ago by David Langenberger ♦ 8.4k
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microRNA microarray or small RNASeq
mouse rna-seq mirna written 2.6 years ago by MANISH RANJAN • 40 • updated 2 days ago by Biostar ♦♦ 20
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Enhanced Volcano transcript label
rna-seq written 2 days ago by wanhe.li • 0 • updated 2 days ago by Kevin Blighe ♦ 35k
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Downloading BAM files and converting to fastq
ebi fastq bam rna-seq written 2 days ago by lamia_203 • 30 • updated 2 days ago by manuel.belmadani • 130
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Error when using GOBar, GOBubble, GOChord function from GOplot package
R rna-seq written 2 days ago by gowthamee • 0 • updated 2 days ago by genomax ♦ 60k
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Stringtie elimination of important transcripts
assembly stringtie alignment rna-seq hisat2 written 3 days ago by ra2967 • 10
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Extract unmapped reads from salmon output
salmon rna-seq written 2 days ago by vaushev • 10
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how to provide background genes to do GO by david
gene next-gen rna-seq written 2 days ago by Grace_G • 0
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What are SizeFactors
R rna-seq normalization written 2 days ago by 2405592M • 20 • updated 2 days ago by i.sudbery ♦ 3.1k
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How can I extract the overlap of the sequence data
rna-seq written 2 days ago by 190444373 • 0 • updated 2 days ago by genomax ♦ 60k
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Is it appropriate to apply RUVseq on output from kallisto?
batchcorrection kallisto rna-seq written 3 days ago by unawaz • 40 • updated 2 days ago by kristoffer.vittingseerup • 1.2k
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129
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Comparing Multiple Species RNA seq data
transcriptome evolution rna-seq comparative written 3 days ago by Lmira zand • 0 • updated 3 days ago by johnsonnathant • 70
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5 follow
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Compare SE and PE gene expression data.
deseq2 rna-seq written 3 days ago by sangram_keshari • 120 • updated 3 days ago by johnsonnathant • 70
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Combining two rnaseq platforms in one
rna-seq written 4 days ago by F • 3.2k • updated 3 days ago by johnsonnathant • 70
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TCGA - finding Normal and Tumor samples for matching protein and rna-seq samples
tcga rna-seq written 11 weeks ago by sid5427 • 10 • updated 3 days ago by Brawni • 90
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