Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: rna-seq • reset
or   Classic search
<prev • 90 results • page 1 of 3 • next >
0
votes
0
answers
29
views
0
answers
Any suggestions upon re-quantifying bam files downloaded from EBI-EGA archive with Salmon?
bedtools salmon samtools rna-seq written 20 minutes ago by vchris_ngs • 4.0k
1
vote
2
answers
67
views
2
answers
Which package to use for RPKM/FPKM RNA-seq counts?
rna-seq written 3 hours ago by hafiz.talhamalik • 0 • updated 22 minutes ago by Renesh • 870
0
votes
0
answers
41
views
0
answers
featureCounts reports zero counts when using GTF Repeatmasker track from UCSC and Bowtie2 SAM mapped RNA-seq reads
software error rna-seq written 1 hour ago by Gema Sanz • 30
12
votes
2
answers
113
views
5 follow
2
answers
Technical replicates in RNAseq
technical_replicates rna-seq written 3 hours ago by grant.hovhannisyan • 250 • updated 3 hours ago by Macspider • 1.4k
0
votes
1
answer
100
views
1
answer
next step after differential expression analysis
rna-seq written 6 hours ago by Pappu • 1.8k • updated 5 hours ago by geek_y ♦ 8.0k
0
votes
0
answers
85
views
0
answers
GFF3 file incompatibilities (source: BRAD)
gff3 gtf star rna-seq formatting error written 14 hours ago by dejong.grant • 0
1
vote
2
answers
125
views
2
answers
topGo Error in .local(.Object, ...) : allGenes must be a factor with 2 levels
R topgo rna-seq edger written 1 day ago by Ric • 130
0
votes
1
answer
96
views
1
answer
Xenopus genome files for RNAseq
rna-seq written 17 hours ago by rob.costa1234 • 110 • updated 17 hours ago by Ron • 600
5
votes
3
answers
144
views
6 follow
3
answers
Need help reading FASTQ file
rna-seq written 21 hours ago by sarmademad • 0 • updated 18 hours ago by shoujun.gu • 190
6
votes
3
answers
175
views
3
answers
Forum: [Please share] How do you keep your NGS data analysis methods/ strategies up to date? (e.g. Data sub-groupping, datasets overlapping, etc.)
ngs chip-seq forum rna-seq written 1 day ago by chiefcat • 70 • updated 19 hours ago by Russ • 10
4
votes
0
answers
177
views
0
answers
Length distribution of PacBio RNA-seq
long reads rna-seq pacbio written 1 day ago by tunl • 40
1
vote
0
answers
102
views
0
answers
RNA strucuture prediction
rna-seq written 22 hours ago by bandanaschapagain • 20
0
votes
0
answers
95
views
0
answers
RNA-editing pipeline for miRNAs
next-gen rna-editing mirna-editing rna-seq written 23 hours ago by sombrajo92 • 0
0
votes
0
answers
96
views
0
answers
Analysis ready RNA Seq repository
online repository rna-seq resource written 23 hours ago by kakaru • 0
0
votes
1
answer
116
views
1
answer
differentially expressed genes
rna-seq written 1 day ago by lilly • 0 • updated 23 hours ago by Kevin Blighe • 930
6
votes
1
answer
104
views
1
answer
How to manipulate a gff or gtf file manually?
genome next-gen rna-seq written 23 hours ago by Javad • 0 • updated 23 hours ago by shoujun.gu • 190
34
votes
3
answers
54k
views
20 follow
3
answers
Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 4.5 years ago by biorepine • 1.2k • updated 23 hours ago by Renesh • 870
0
votes
1
answer
196
views
1
answer
How to find target genes of long non coding RNA
rna-seq written 22 days ago by bhuwankhatri11 • 10 • updated 1 day ago by WouterDeCoster ♦ 21k
6
votes
1
answer
127
views
1
answer
topvariance genes from deseq2 output and heatmap
R rna-seq written 1 day ago by krushnach80 • 160
5
votes
2
answers
181
views
5 follow
2
answers
Selecting genes that best separate between two groups
ttest feature selection limma filtering rna-seq written 1 day ago by lirongrossmann • 10 • updated 1 day ago by Kevin Blighe • 930
0
votes
0
answers
81
views
0
answers
Why are gene expression phylogenies and the structure of hierarchical clustering so different?
rna-seq written 1 day ago by haoyan14ioz • 0
1
vote
2
answers
123
views
2
answers
RNASeq TCGA data
tcga rna-seq written 5 days ago by elizabethR • 30
3
votes
1
answer
112
views
1
answer
topGO allGenes argument
R topgo rna-seq edger written 1 day ago by Ric • 130 • updated 1 day ago by e.rempel • 430
1
vote
2
answers
110
views
2
answers
Gene annotation from genomic features
annotation chip-seq rna-seq written 1 day ago by chiefcat • 70
0
votes
2
answers
1.9k
views
2
answers
Tool for predicting RNA binding protein
rna-seq rna-binding proteins written 2.6 years ago by EVR • 430 • updated 1 day ago by liushiyong • 0
0
votes
0
answers
112
views
0
answers
retrieving attributes of a list generated by read.fasta()
R rna-seq written 2 days ago by lech.kaczmarczyk • 0
1
vote
2
answers
136
views
2
answers
Seq. depth for DE analysis
rna-seq "de analysis" "seq. depth" written 2 days ago by grant.hovhannisyan • 250 • updated 1 day ago by Renesh • 870
1
vote
1
answer
114
views
1
answer
Most variable gene from the differentially expressed genes
R rna-seq written 1 day ago by krushnach80 • 160 • updated 1 day ago by Satyajeet • 980
0
votes
0
answers
85
views
0
answers
Is it possible to import a count table into MEGAN?
featurecounts rna-seq bwa megan written 2 days ago by victor.gambarini • 20
1
vote
3
answers
553
views
5 follow
3
answers
Job: [not available anymore] Junior bioinformatician (Bsc or Msc) - Dana Farber Cancer Institute, Boston, MA, USA
python chip-seq job R rna-seq linux written 7 months ago by rubendries • 10
<prev • 90 results • page 1 of 3 • next >
Recent Votes
Recent Locations • All »
  • United States, just now
  • United States, just now
  • japan, 1 minute ago
  • United States, 2 minutes ago
  • Ontario Veterinary College, University of Guelph, Guelph, Ontario, Canada, 2 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1841 users visited in the last hour