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<prev • 3,148 results • page 1 of 105 • next >
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What dataset do I use to annotate a transcriptome? Another transcriptome or a genome?
alignment rna-seq written 58 minutes ago by pseudacris • 0
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19
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Cluster Stability Assesment
R seurat clustering rna-seq written 4 hours ago by Maria17 • 0
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2
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53
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Bacterial refseq to remove contaminats
transcritpome rna-seq written 1 day ago by Rogerio Ribeiro • 30 • updated 5 hours ago by gamamiguelangel • 0
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1
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40
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1
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SRA toolkit fastq files download error
sra rna-seq written 8 hours ago by sidrah.maryam • 20
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43
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gene expression x phenotype correlation
rna-seq written 7 hours ago by demoraesdiogo2017 • 40
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30
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kallisto preprocessing-Error: unspliced. bus has no BUS records
kallisto rna-seq bus tools written 7 hours ago by gabriella.wangyi1986 • 0 • updated 6 hours ago by Istvan Albert ♦♦ 86k
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Multi-factor time series design model in DESeq2 analysis
rna-seq written 5.6 years ago by prppmet • 0 • updated 9 hours ago by Biostar ♦♦ 20
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75
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1
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Collapse bed and only sum overlapping parts
bed alignment rna-seq written 6 days ago by Matthias • 30
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51
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Rna-seq time series dataset
next-gen rna-seq written 11 hours ago by roberta.orru095 • 0 • updated 10 hours ago by GenoMax ♦ 96k
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74
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7 follow
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Forward and reverse single cell data analysis
rna-seq written 15 hours ago by elb • 200 • updated 11 hours ago by swbarnes2 ♦ 9.6k
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5 follow
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Multiple ensembl gene ID for the same gene name (Symbol), how to deal with this while differential analysis?
ensembl next-gen rna-seq alignment written 20 days ago by Swarna • 0
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39
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IGV RNAseq- Splice junction
rna-seq igv written 12 hours ago by vinishavvenugopal • 0
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48
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Identifying cancer subtypes
gene rna-seq written 12 hours ago by glady • 270
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5 follow
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How to find the secreted protein tags
R next-gen protein rna-seq written 16 days ago by koushikayaluri • 40 • updated 15 hours ago by Elisabeth Gasteiger • 1.9k
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How to solve the problem related to unmatched chromosome identifiers?
rna-seq written 8 weeks ago by priya.saxena • 0 • updated 15 hours ago by Biostar ♦♦ 20
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Change location of 'fragments' in multiome Seurat file
R signac atac-seq seurat rna-seq written 17 hours ago by V • 240
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47
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question regarding histone and lncRNA genes in poly(A) RNA-seq data
rna-seq polya rna-seq written 18 hours ago by Alex V. Gopanenko • 0
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553
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interaction analysis of smallRNA-seq and RNA-seq data
srnarna-se rna-seq written 2.8 years ago by Sam • 140 • updated 21 hours ago by Biostar ♦♦ 20
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5 follow
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Does the countToFPKM package work for single end RNA seq or its only for paired end?
rna-seq written 1 day ago by salehm • 0 • updated 1 day ago by seidel ♦ 7.4k
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205
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Forum: is valid to apply several cut offs thresholds to a data-matrix used to perform coexpression analysis until reach the desire result?
coexpression-analysis forum rna-seq matrix-filtering written 3 days ago by cyntsc10 • 0
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113
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I want to create a box plot for RNA-Seq data, but i am new to R, so i don't know, how to perform this task
R rna-seq written 1 day ago by rishav513 • 0
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86
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Lanes in the context of RNA-SEQ data
rna-seq written 1 day ago by Sammy • 10 • updated 1 day ago by GenoMax ♦ 96k
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.mcool to .hic
rna-seq written 2.1 years ago by dimitrischat • 130 • updated 1 day ago by Charlotte West • 10
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3
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Mapping GRCh38 to ENSEMBL / UCSC ,Gene, transcript , cDNA and Protein IDs and Sequence
genome mappping rna-seq snp ensembl written 4.1 years ago by inambioinfo • 110 • updated 1 day ago by Biostar ♦♦ 20
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59
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RNA-seq DEGs downstream analysis and reporting in literature
gene R rna-seq written 1 day ago by Ankur B. Sharma • 20 • updated 1 day ago by i.sudbery ♦ 11k
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htseq-count returns 0 count for all
htseq-count rna-seq written 1 day ago by ziziqolo • 10 • updated 1 day ago by lieven.sterck ♦ 10.0k
2
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1
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52
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1
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Help with analyzing NCBI tissue expression data - solr xml file
ncbi tissue expression solr rna-seq xml written 2 days ago by j.matt.franklin • 0
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50
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recommended minimum cell numbers to pseudobulk for DE comparisons between groups
single-cell scrna rna-seq written 1 day ago by Sentinel156 • 130
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73
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1
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gene ID conversion
gene rna-seq written 6 days ago by Adishi • 0 • updated 2 days ago by sysboolean • 50
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1
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Intron orders transcripts like encoded amino acid
mrna intron amino acid rna-seq transcript written 5.9 years ago by kevberm • 0 • updated 2 days ago by Biostar ♦♦ 20
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