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written 5 hours ago by
sandeep.amberkar18 • 30
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Biostar ♦♦ 20
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written 23 hours ago by
wstla27 • 0
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Pierre Lindenbaum ♦ 121k
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- C: Why is an Input file used as a control during MACS peak calling?
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- A: Removing SNPs with the count allele in 5 (insertion), 6 (deletion) or 7(allele f
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Recent Replies
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A: cut the sequence from fasta file by
finswimmer ♦ 11k
What you are showing is not a valid fasta file, because the id is missing. Assuming you have `my...
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C: Difference between samtools cat and the unix command cat? by
RamRS ♦ 22k
You don't need `-h` to copy header from file1 - that is the default behavior without `-h`.
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C: Difference between samtools cat and the unix command cat? by
RamRS ♦ 22k
I think `samtools cat` would treat the body and the header differently, whereas cat would just co...
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A: Difference between samtools cat and the unix command cat? by
benformatics • 950
Using samtools will allow you to use `-h`which will copy the header from a selected bam file (def...
-
C: including batch in design~ by
Asaf ♦ 6.1k
The name of the batch (like sequencing lane ID for instance) each library was prepared and sequen...
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C: help with biopython by
ricordo.yan • 0
Thank you so much for the help
-
C: Removing SNPs with the count allele in 5 (insertion), 6 (deletion) or 7(allele f by
jongyun.jung • 10
Thank you for your help!
-
A: How to Analyze Overlapping Peaks using ChIP-Seq Data by
Alex Reynolds ♦ 28k
You could get TSS from gene annotations specific to your reference genome, e.g.: https://www.bio...
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A: Removing SNPs with the count allele in 5 (insertion), 6 (deletion) or 7(allele f by
Pierre Lindenbaum ♦ 121k
awk '($4 ~/^[ATGC]$/ && $5 ~/^[ATGC]$/)'
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C: cnvkit bgzf_read error 4 after 4 bytes by
sm.hashemin • 80
thanks for you answer. It says gzip compressed data, extra field
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C: Calculate disease risk based on the genoytype of some SNPs? by
Sam • 2.4k
Mind letting us know which part of the document do you find to be too complex? One of the main go...
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C: .slurm vs .sh files by
RamRS ♦ 22k
As long as the shell is mentioned in the first line, the script can be run as long as it's not ru...
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