Showing: rna-seqreset
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23
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96k
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16 follow
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36
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3
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56k
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24 follow
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Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 4.5 years ago by biorepine1.3k • updated 4 weeks ago by Renesh1.1k
87
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52k
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51 follow
6
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25
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50k
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13 follow
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Rpkm Calculation For Genes
rpkm rna-seq written 5.0 years ago by siddharth.sethi5190 • updated 5.0 years ago by JC6.2k
113
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8
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40k
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60 follow
8
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6
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3
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37k
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5 follow
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what is the difference between single end and paired end in sequencing
rna-seq written 3.3 years ago by M K310 • updated 10 months ago by morteza.mahmoudisaber30
28
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4
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29k
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22 follow
4
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Best Way To Normalize Rna-Seq Data For Expression Profiling
normalization rna-seq written 3.9 years ago by ajc8100 • updated 2.3 years ago by Amitm1.3k
24
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2
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28k
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15 follow
2
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Extracting Read Count For Each Gene/Exon From Rna-Seq Bam Files
differential expression rna-seq written 5.4 years ago by Sahel240 • updated 16 months ago by Biostar ♦♦ 20
20
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5
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28k
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12 follow
5
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What Databases Are Available For Rna-Seq Datasets?
geo database rna-seq written 5.4 years ago by aprathke120 • updated 5.4 years ago by Khader Shameer17k
43
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5
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26k
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23 follow
5
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How Do You Justify Your Rna-Seq Expression Threshold (Fpkm/Rpkm) ?
rpkm fpkm cutoff rna-seq written 4.8 years ago by biorepine1.3k • updated 2.4 years ago by Malachi Griffith16k
129
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33
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25k
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130 follow
33
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Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 2.2 years ago by TriS3.1k • updated 4 months ago by oriolebaltimore20
89
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19
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25k
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43 follow
19
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Gene Fusion Detection: Rna-Seq Data
fusion next-gen rna-seq sequencing written 5.4 years ago by KS320 • updated 12 months ago by aditisk0
37
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0
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25k
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19 follow
0
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Tutorial: Visualizing Chip-Seq Data Using Ucsc [Bigwig]
chip-seq tutorial bigwig visualization rna-seq ucsc written 5.5 years ago by Sukhdeep Singh9.0k • updated 20 months ago by Shicheng Guo4.5k
27
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5
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25k
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16 follow
5
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FPKM vs raw counts vs RPKM
rpkm fpkm rna-seq raw counts written 2.8 years ago by NHEJ250 • updated 17 months ago by Daniel3.5k
58
votes
3
answers
25k
views
15 follow
3
answers
Why Do You Need To Use Cdna For Rna-Seq?
cdna rna-seq written 5.0 years ago by Justin430 • updated 14 months ago by SeqFreak0
95
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8
answers
24k
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31 follow
8
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Is Tophat The Only Mapper To Consider For Rna-Seq Data?
tophat bwa rna-seq written 4.8 years ago by Lisa290 • updated 2.6 years ago by n12408010
21
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2
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24k
views
13 follow
2
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Using transcripts per million (TPM)
deseq2 tpm rna-seq written 2.6 years ago by Tom Harrop140 • updated 13 months ago by Biostar ♦♦ 20
110
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8
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22k
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39 follow
8
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Why Are There Many Rna-Seq Hits To Intronic Regions?
rna-seq written 5.5 years ago by lh330k • updated 18 months ago by Michael Dondrup43k
23
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5
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22k
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11 follow
5
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How to convert to .SRA files to .FQ (FASTQ)
sra fastq sraa rna-seq written 3.2 years ago by Veli Kaan Aydin30 • updated 3.1 years ago by Manvendra Singh1.9k
66
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8
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22k
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28 follow
8
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Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 7.4 years ago by brentp22k • updated 2.1 years ago by Malachi Griffith16k
57
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5
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20k
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22 follow
5
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Should We Remove Duplicated Reads In Rna-Seq ?
read rna-seq written 5.0 years ago by siddharth.sethi5190 • updated 3.8 years ago by earonesty200
18
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3
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20k
views
13 follow
3
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Hierarchical Clustering And Heatmap Analysis For Rna-Seq Data
rna-seq heatmap written 5.0 years ago by KJ Lim110 • updated 5.0 years ago by Damian Kao14k
101
votes
4
answers
19k
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40 follow
4
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Why Does Rna-Seq Read Count Fit Poisson Distribution?
modeling rna-seq written 4.0 years ago by sckinta400 • updated 3.3 years ago by Ann2.1k
16
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3
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19k
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3
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Strand-specific vs. non-strand-specific RNAseq
next-gen strand-specific rna-seq written 3.1 years ago by Y Tb110 • updated 3.1 years ago by Malachi Griffith16k
10
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1
answer
17k
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5 follow
1
answer
8
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2
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17k
views
6 follow
2
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GTF annotation file for Human
next-gen rna-seq written 3.5 years ago by M K310 • updated 3.5 years ago by Dan D6.2k
16
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4
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17k
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7 follow
4
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Rna-Seq Data In Public Database
rna-seq written 5.1 years ago by camelbbs610 • updated 4.3 years ago by alaincoletta60
16
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1
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16k
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7 follow
1
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What is the difference between GTF AND GFF format
rna-seq written 3.5 years ago by Y Tb110 • updated 3.5 years ago by jason160
11
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1
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16k
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5 follow
1
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Trimmomatic: Trimming only custom adapter sequences
next-gen rna-seq sequencing written 3.2 years ago by lewis.stevens0740 • updated 3.2 years ago by Dan D6.2k
57
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3
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16k
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52 follow
3
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Tutorial: Rna-Seq Review Papers
tutorial papers rna-seq written 5.1 years ago by Istvan Albert ♦♦ 74k • updated 20 months ago by art.matysik0
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