Showing: rna-seqreset
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32
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144k
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21 follow
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39
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2
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74k
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25 follow
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Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 5.9 years ago by biorepine1.4k • updated 17 months ago by Renesh1.5k
93
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6
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65k
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58 follow
6
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25
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2
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54k
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13 follow
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Rpkm Calculation For Genes
rpkm rna-seq written 6.3 years ago by siddharth.sethi5210 • updated 6.3 years ago by JC7.3k
126
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9
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48k
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66 follow
9
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162
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2
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47k
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160 follow
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Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 3.5 years ago by TriS3.6k • updated 9 weeks ago by skjobs01230
7
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3
answers
46k
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5 follow
3
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what is the difference between single end and paired end in sequencing
rna-seq written 4.6 years ago by M K450 • updated 2.2 years ago by morteza.mahmoudisaber70
24
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5
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37k
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12 follow
5
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What Databases Are Available For Rna-Seq Datasets?
geo database rna-seq written 6.7 years ago by aprathke140 • updated 6.7 years ago by Khader Shameer17k
30
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4
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34k
views
24 follow
4
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Best Way To Normalize Rna-Seq Data For Expression Profiling
normalization rna-seq written 5.2 years ago by ajc8120 • updated 3.7 years ago by Amitm1.6k
24
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2
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33k
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15 follow
2
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Extracting Read Count For Each Gene/Exon From Rna-Seq Bam Files
differential expression rna-seq written 6.8 years ago by Sahel250 • updated 2.7 years ago by Biostar ♦♦ 20
63
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3
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31k
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17 follow
3
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Why Do You Need To Use Cdna For Rna-Seq?
cdna rna-seq written 6.3 years ago by Justin440 • updated 2.5 years ago by SeqFreak0
47
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5
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31k
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28 follow
5
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How Do You Justify Your Rna-Seq Expression Threshold (Fpkm/Rpkm) ?
rpkm fpkm cutoff rna-seq written 6.1 years ago by biorepine1.4k • updated 3.7 years ago by Malachi Griffith17k
24
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2
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31k
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17 follow
2
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Using transcripts per million (TPM)
deseq2 tpm rna-seq written 4.0 years ago by Tom Harrop150 • updated 2.4 years ago by Biostar ♦♦ 20
31
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5
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31k
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15 follow
5
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How to convert to .SRA files to .FQ (FASTQ)
sra fastq sraa rna-seq written 4.5 years ago by Veli Kaan Aydin40 • updated 4.5 years ago by Manvendra Singh2.0k
30
votes
5
answers
31k
views
17 follow
5
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FPKM vs raw counts vs RPKM
rpkm fpkm rna-seq raw counts written 4.1 years ago by NHEJ320 • updated 2.8 years ago by Daniel3.7k
97
votes
20
answers
31k
views
51 follow
20
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Gene Fusion Detection: Rna-Seq Data
fusion next-gen rna-seq sequencing written 6.7 years ago by KS350 • updated 7 weeks ago by Shixiang30
44
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0
answers
30k
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27 follow
0
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Tutorial: Visualizing Chip-Seq Data Using Ucsc [Bigwig]
chip-seq tutorial bigwig visualization rna-seq ucsc written 6.8 years ago by Sukhdeep Singh9.6k • updated 3.0 years ago by Shicheng Guo7.4k
124
votes
8
answers
28k
views
44 follow
8
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Why Are There Many Rna-Seq Hits To Intronic Regions?
rna-seq written 6.8 years ago by lh331k • updated 2.9 years ago by Michael Dondrup45k
96
votes
8
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27k
views
33 follow
8
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Is Tophat The Only Mapper To Consider For Rna-Seq Data?
tophat bwa rna-seq written 6.1 years ago by Lisa310 • updated 3.9 years ago by n12408010
63
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5
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27k
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29 follow
5
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Should We Remove Duplicated Reads In Rna-Seq ?
read rna-seq written 6.3 years ago by siddharth.sethi5210 • updated 5.2 years ago by earonesty210
18
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3
answers
26k
views
5 follow
3
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Strand-specific vs. non-strand-specific RNAseq
next-gen strand-specific rna-seq written 4.4 years ago by Y Tb140 • updated 4.4 years ago by Malachi Griffith17k
65
votes
8
answers
25k
views
26 follow
8
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Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 8.7 years ago by brentp22k • updated 3.4 years ago by Malachi Griffith17k
33
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1
answer
25k
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28 follow
1
answer
118
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4
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25k
views
50 follow
4
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Why Does Rna-Seq Read Count Fit Poisson Distribution?
modeling rna-seq written 5.3 years ago by sckinta480 • updated 4.7 years ago by Ann2.2k
15
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2
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24k
views
12 follow
2
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GTF annotation file for Human
next-gen rna-seq written 4.8 years ago by M K450 • updated 4.8 years ago by Dan D6.7k
19
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1
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24k
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9 follow
1
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What is the difference between GTF AND GFF format
rna-seq written 4.8 years ago by Y Tb140 • updated 4.8 years ago by jason160
18
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3
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24k
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12 follow
3
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Hierarchical Clustering And Heatmap Analysis For Rna-Seq Data
rna-seq heatmap written 6.4 years ago by KJ Lim120 • updated 6.4 years ago by Damian Kao15k
238
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11
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23k
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164 follow
11
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24
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6
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21k
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16 follow
6
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Where Can I Download Some Bam Files?
bioinformatics bam rna-seq written 6.7 years ago by snakesgun110 • updated 3 months ago by Roman Valls GuimerĂ 510
12
votes
1
answer
21k
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7 follow
1
answer
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