Showing: rna-seqreset
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25
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103k
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16 follow
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37
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3
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59k
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24 follow
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Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 4.7 years ago by biorepine1.3k • updated 12 weeks ago by Renesh1.1k
88
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6
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55k
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52 follow
6
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25
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2
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50k
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13 follow
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Rpkm Calculation For Genes
rpkm rna-seq written 5.2 years ago by siddharth.sethi5190 • updated 5.2 years ago by JC6.4k
115
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8
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41k
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61 follow
8
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6
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3
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39k
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5 follow
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what is the difference between single end and paired end in sequencing
rna-seq written 3.5 years ago by M K320 • updated 12 months ago by morteza.mahmoudisaber30
28
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4
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30k
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22 follow
4
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Best Way To Normalize Rna-Seq Data For Expression Profiling
normalization rna-seq written 4.0 years ago by ajc8100 • updated 2.5 years ago by Amitm1.3k
20
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5
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30k
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12 follow
5
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What Databases Are Available For Rna-Seq Datasets?
geo database rna-seq written 5.5 years ago by aprathke120 • updated 5.5 years ago by Khader Shameer17k
24
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2
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29k
views
15 follow
2
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Extracting Read Count For Each Gene/Exon From Rna-Seq Bam Files
differential expression rna-seq written 5.6 years ago by Sahel240 • updated 18 months ago by Biostar ♦♦ 20
134
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34
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28k
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135 follow
34
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Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 2.4 years ago by TriS3.2k • updated 7 weeks ago by lenazhou0
43
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5
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27k
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23 follow
5
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How Do You Justify Your Rna-Seq Expression Threshold (Fpkm/Rpkm) ?
rpkm fpkm cutoff rna-seq written 4.9 years ago by biorepine1.3k • updated 2.5 years ago by Malachi Griffith16k
27
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5
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26k
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16 follow
5
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FPKM vs raw counts vs RPKM
rpkm fpkm rna-seq raw counts written 3.0 years ago by NHEJ250 • updated 19 months ago by Daniel3.5k
90
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19
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26k
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45 follow
19
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Gene Fusion Detection: Rna-Seq Data
fusion next-gen rna-seq sequencing written 5.5 years ago by KS330 • updated 14 months ago by aditisk0
39
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0
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26k
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21 follow
0
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Tutorial: Visualizing Chip-Seq Data Using Ucsc [Bigwig]
chip-seq tutorial bigwig visualization rna-seq ucsc written 5.7 years ago by Sukhdeep Singh9.1k • updated 22 months ago by Shicheng Guo4.6k
21
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2
answers
26k
views
13 follow
2
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Using transcripts per million (TPM)
deseq2 tpm rna-seq written 2.8 years ago by Tom Harrop140 • updated 15 months ago by Biostar ♦♦ 20
58
votes
3
answers
26k
views
15 follow
3
answers
Why Do You Need To Use Cdna For Rna-Seq?
cdna rna-seq written 5.2 years ago by Justin430 • updated 16 months ago by SeqFreak0
96
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8
answers
25k
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33 follow
8
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Is Tophat The Only Mapper To Consider For Rna-Seq Data?
tophat bwa rna-seq written 4.9 years ago by Lisa300 • updated 2.8 years ago by n12408010
29
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5
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23k
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15 follow
5
answers
How to convert to .SRA files to .FQ (FASTQ)
sra fastq sraa rna-seq written 3.3 years ago by Veli Kaan Aydin40 • updated 3.3 years ago by Manvendra Singh2.0k
109
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8
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23k
views
37 follow
8
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Why Are There Many Rna-Seq Hits To Intronic Regions?
rna-seq written 5.7 years ago by lh330k • updated 20 months ago by Michael Dondrup43k
66
votes
8
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22k
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28 follow
8
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Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 7.6 years ago by brentp22k • updated 2.3 years ago by Malachi Griffith16k
57
votes
5
answers
21k
views
22 follow
5
answers
Should We Remove Duplicated Reads In Rna-Seq ?
read rna-seq written 5.1 years ago by siddharth.sethi5190 • updated 4.0 years ago by earonesty200
18
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3
answers
21k
views
12 follow
3
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Hierarchical Clustering And Heatmap Analysis For Rna-Seq Data
rna-seq heatmap written 5.2 years ago by KJ Lim110 • updated 5.2 years ago by Damian Kao14k
16
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3
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20k
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3
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Strand-specific vs. non-strand-specific RNAseq
next-gen strand-specific rna-seq written 3.2 years ago by Y Tb110 • updated 3.2 years ago by Malachi Griffith16k
104
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4
answers
20k
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43 follow
4
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Why Does Rna-Seq Read Count Fit Poisson Distribution?
modeling rna-seq written 4.1 years ago by sckinta410 • updated 3.5 years ago by Ann2.2k
10
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1
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18k
views
5 follow
1
answer
8
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2
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18k
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6 follow
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GTF annotation file for Human
next-gen rna-seq written 3.6 years ago by M K320 • updated 3.6 years ago by Dan D6.3k
16
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1
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17k
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7 follow
1
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What is the difference between GTF AND GFF format
rna-seq written 3.6 years ago by Y Tb110 • updated 3.6 years ago by jason160
16
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4
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17k
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7 follow
4
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Rna-Seq Data In Public Database
rna-seq written 5.3 years ago by camelbbs610 • updated 4.4 years ago by alaincoletta60
11
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1
answer
16k
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5 follow
1
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Trimmomatic: Trimming only custom adapter sequences
next-gen rna-seq sequencing written 3.4 years ago by lewis.stevens0740 • updated 3.4 years ago by Dan D6.3k
58
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3
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16k
views
52 follow
3
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Tutorial: Rna-Seq Review Papers
tutorial papers rna-seq written 5.3 years ago by Istvan Albert ♦♦ 75k • updated 22 months ago by art.matysik0
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