Showing: rna-seqreset
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36
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150k
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25 follow
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40
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2
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76k
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25 follow
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Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 6.1 years ago by biorepine1.4k • updated 19 months ago by Renesh1.6k
95
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6
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66k
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61 follow
6
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25
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2
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54k
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13 follow
2
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Rpkm Calculation For Genes
rpkm rna-seq written 6.5 years ago by siddharth.sethi5220 • updated 6.5 years ago by JC7.7k
129
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9
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50k
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66 follow
9
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176
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3
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49k
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173 follow
3
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Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 3.7 years ago by TriS3.7k • updated 8 days ago by my60
7
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3
answers
47k
views
5 follow
3
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what is the difference between single end and paired end in sequencing
rna-seq written 4.8 years ago by M K460 • updated 2.4 years ago by morteza.mahmoudisaber70
24
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5
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38k
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12 follow
5
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What Databases Are Available For Rna-Seq Datasets?
geo database rna-seq written 6.9 years ago by aprathke140 • updated 6.9 years ago by Khader Shameer18k
30
votes
4
answers
34k
views
24 follow
4
answers
Best Way To Normalize Rna-Seq Data For Expression Profiling
normalization rna-seq written 5.4 years ago by ajc8120 • updated 3.9 years ago by Amitm1.6k
24
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2
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33k
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15 follow
2
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Extracting Read Count For Each Gene/Exon From Rna-Seq Bam Files
differential expression rna-seq written 7.0 years ago by Sahel250 • updated 2.9 years ago by Biostar ♦♦ 20
31
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5
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32k
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15 follow
5
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How to convert to .SRA files to .FQ (FASTQ)
sra fastq sraa rna-seq written 4.7 years ago by Veli Kaan Aydin40 • updated 4.7 years ago by Manvendra Singh2.0k
63
votes
3
answers
32k
views
17 follow
3
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Why Do You Need To Use Cdna For Rna-Seq?
cdna rna-seq written 6.5 years ago by Justin440 • updated 2.7 years ago by SeqFreak0
47
votes
5
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32k
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28 follow
5
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How Do You Justify Your Rna-Seq Expression Threshold (Fpkm/Rpkm) ?
rpkm fpkm cutoff rna-seq written 6.3 years ago by biorepine1.4k • updated 3.9 years ago by Malachi Griffith17k
30
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5
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32k
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17 follow
5
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FPKM vs raw counts vs RPKM
rpkm fpkm rna-seq raw counts written 4.3 years ago by NHEJ320 • updated 3.0 years ago by Daniel3.7k
24
votes
2
answers
32k
views
17 follow
2
answers
Using transcripts per million (TPM)
deseq2 tpm rna-seq written 4.1 years ago by Tom Harrop150 • updated 2.6 years ago by Biostar ♦♦ 20
97
votes
16
answers
31k
views
51 follow
16
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Gene Fusion Detection: Rna-Seq Data
fusion next-gen rna-seq sequencing written 6.9 years ago by KS360 • updated 4 months ago by Shixiang30
44
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0
answers
31k
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27 follow
0
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Tutorial: Visualizing Chip-Seq Data Using Ucsc [Bigwig]
chip-seq tutorial bigwig visualization rna-seq ucsc written 7.0 years ago by Sukhdeep Singh9.7k • updated 3.2 years ago by Shicheng Guo7.4k
37
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1
answer
30k
views
30 follow
1
answer
124
votes
8
answers
29k
views
44 follow
8
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Why Are There Many Rna-Seq Hits To Intronic Regions?
rna-seq written 7.0 years ago by lh331k • updated 3.0 years ago by Michael Dondrup46k
66
votes
5
answers
28k
views
32 follow
5
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Should We Remove Duplicated Reads In Rna-Seq ?
read rna-seq written 6.5 years ago by siddharth.sethi5220 • updated 5.4 years ago by earonesty220
96
votes
8
answers
28k
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33 follow
8
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Is Tophat The Only Mapper To Consider For Rna-Seq Data?
tophat bwa rna-seq written 6.3 years ago by Lisa310 • updated 4.1 years ago by n12408010
18
votes
3
answers
26k
views
5 follow
3
answers
Strand-specific vs. non-strand-specific RNAseq
next-gen strand-specific rna-seq written 4.6 years ago by Y Tb150 • updated 4.6 years ago by Malachi Griffith17k
65
votes
8
answers
26k
views
26 follow
8
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Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 8.9 years ago by brentp23k • updated 3.6 years ago by Malachi Griffith17k
118
votes
4
answers
25k
views
50 follow
4
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Why Does Rna-Seq Read Count Fit Poisson Distribution?
modeling rna-seq written 5.5 years ago by sckinta480 • updated 4.8 years ago by Ann2.2k
241
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11
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25k
views
166 follow
11
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15
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2
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25k
views
12 follow
2
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GTF annotation file for Human
next-gen rna-seq written 5.0 years ago by M K460 • updated 5.0 years ago by Dan D6.7k
19
votes
1
answer
25k
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9 follow
1
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What is the difference between GTF AND GFF format
rna-seq written 5.0 years ago by Y Tb150 • updated 5.0 years ago by jason160
18
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3
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24k
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12 follow
3
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Hierarchical Clustering And Heatmap Analysis For Rna-Seq Data
rna-seq heatmap written 6.6 years ago by KJ Lim120 • updated 6.6 years ago by Damian Kao15k
24
votes
6
answers
22k
views
16 follow
6
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Where Can I Download Some Bam Files?
bioinformatics bam rna-seq written 6.9 years ago by snakesgun110 • updated 5 months ago by Roman Valls GuimerĂ 510
12
votes
1
answer
21k
views
7 follow
1
answer
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