Showing: rna-seqreset
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27
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129k
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20 follow
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38
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2
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69k
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25 follow
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Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 5.5 years ago by biorepine1.4k • updated 12 months ago by Renesh1.3k
93
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6
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63k
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60 follow
6
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25
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2
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53k
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13 follow
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Rpkm Calculation For Genes
rpkm rna-seq written 5.9 years ago by siddharth.sethi5200 • updated 5.9 years ago by JC6.8k
124
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9
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46k
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66 follow
9
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7
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3
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44k
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5 follow
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what is the difference between single end and paired end in sequencing
rna-seq written 4.2 years ago by M K390 • updated 21 months ago by morteza.mahmoudisaber50
156
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1
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41k
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154 follow
1
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Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 3.1 years ago by TriS3.4k • updated 9 days ago by skjobs01230
20
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5
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34k
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12 follow
5
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What Databases Are Available For Rna-Seq Datasets?
geo database rna-seq written 6.3 years ago by aprathke120 • updated 6.3 years ago by Khader Shameer17k
30
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4
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33k
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24 follow
4
answers
Best Way To Normalize Rna-Seq Data For Expression Profiling
normalization rna-seq written 4.8 years ago by ajc8120 • updated 3.3 years ago by Amitm1.6k
24
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2
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32k
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15 follow
2
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Extracting Read Count For Each Gene/Exon From Rna-Seq Bam Files
differential expression rna-seq written 6.4 years ago by Sahel250 • updated 2.3 years ago by Biostar ♦♦ 20
46
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5
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30k
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26 follow
5
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How Do You Justify Your Rna-Seq Expression Threshold (Fpkm/Rpkm) ?
rpkm fpkm cutoff rna-seq written 5.7 years ago by biorepine1.4k • updated 3.3 years ago by Malachi Griffith16k
21
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2
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30k
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14 follow
2
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Using transcripts per million (TPM)
deseq2 tpm rna-seq written 3.5 years ago by Tom Harrop140 • updated 2.0 years ago by Biostar ♦♦ 20
27
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5
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30k
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16 follow
5
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FPKM vs raw counts vs RPKM
rpkm fpkm rna-seq raw counts written 3.7 years ago by NHEJ290 • updated 2.4 years ago by Daniel3.6k
61
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3
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29k
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16 follow
3
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Why Do You Need To Use Cdna For Rna-Seq?
cdna rna-seq written 5.9 years ago by Justin440 • updated 2.1 years ago by SeqFreak0
44
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0
answers
29k
views
27 follow
0
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Tutorial: Visualizing Chip-Seq Data Using Ucsc [Bigwig]
chip-seq tutorial bigwig visualization rna-seq ucsc written 6.4 years ago by Sukhdeep Singh9.4k • updated 2.6 years ago by Shicheng Guo6.5k
92
votes
19
answers
29k
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47 follow
19
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Gene Fusion Detection: Rna-Seq Data
fusion next-gen rna-seq sequencing written 6.3 years ago by KS340 • updated 23 months ago by aditisk0
30
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5
answers
28k
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15 follow
5
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How to convert to .SRA files to .FQ (FASTQ)
sra fastq sraa rna-seq written 4.1 years ago by Veli Kaan Aydin40 • updated 4.1 years ago by Manvendra Singh2.0k
96
votes
8
answers
27k
views
33 follow
8
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Is Tophat The Only Mapper To Consider For Rna-Seq Data?
tophat bwa rna-seq written 5.7 years ago by Lisa300 • updated 3.5 years ago by n12408010
115
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8
answers
26k
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41 follow
8
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Why Are There Many Rna-Seq Hits To Intronic Regions?
rna-seq written 6.4 years ago by lh331k • updated 2.4 years ago by Michael Dondrup44k
61
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5
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25k
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26 follow
5
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Should We Remove Duplicated Reads In Rna-Seq ?
read rna-seq written 5.9 years ago by siddharth.sethi5200 • updated 4.8 years ago by earonesty200
65
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8
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25k
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26 follow
8
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Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 8.3 years ago by brentp22k • updated 3.0 years ago by Malachi Griffith16k
18
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3
answers
24k
views
5 follow
3
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Strand-specific vs. non-strand-specific RNAseq
next-gen strand-specific rna-seq written 4.0 years ago by Y Tb130 • updated 4.0 years ago by Malachi Griffith16k
114
votes
4
answers
23k
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46 follow
4
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Why Does Rna-Seq Read Count Fit Poisson Distribution?
modeling rna-seq written 4.9 years ago by sckinta460 • updated 4.2 years ago by Ann2.2k
18
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3
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22k
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12 follow
3
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Hierarchical Clustering And Heatmap Analysis For Rna-Seq Data
rna-seq heatmap written 6.0 years ago by KJ Lim120 • updated 6.0 years ago by Damian Kao15k
15
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2
answers
22k
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11 follow
2
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GTF annotation file for Human
next-gen rna-seq written 4.4 years ago by M K390 • updated 4.4 years ago by Dan D6.6k
18
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1
answer
21k
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7 follow
1
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What is the difference between GTF AND GFF format
rna-seq written 4.4 years ago by Y Tb130 • updated 4.4 years ago by jason160
229
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11
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21k
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154 follow
11
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12
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1
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20k
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7 follow
1
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21
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6
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20k
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13 follow
6
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Where Can I Download Some Bam Files?
bioinformatics bam rna-seq written 6.3 years ago by snakesgun90 • updated 3.9 years ago by Maximilian Haeussler1.3k
50
votes
1
answer
19k
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8 follow
1
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