Showing: rpkmreset
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3
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4.5k
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5 follow
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Rpkm (R Code)
rpkm written 3.8 years ago by HNK80 • updated 7 days ago by EagleEye4.9k
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246
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Tutorial: bam2rpkm by bedtools
bedtools rpkm tutorial bam rna-seq written 12 weeks ago by jmzeng131450
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166
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RPKM documentation is needed!
rpkm gtex rna-seq written 3 months ago by sima_r13910
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24 follow
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Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 4.8 years ago by biorepine1.3k • updated 4 months ago by Renesh1.1k
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5 follow
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Rpkm Calculation
rpkm written 5.9 years ago by Varun Gupta920 • updated 4 months ago by Biostar ♦♦ 20
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differential expression based on multiple biological repeats
rpkm differential-expression rna-seq written 3.3 years ago by Whetting1.5k • updated 4 months ago by KVC_bioinfo240
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Best way to address different batches of RNA-seq
rpkm sequence batch effect rna-seq fold change written 9 months ago by tud5512210 • updated 7 months ago by Biostar ♦♦ 20
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433
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7 follow
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Bowtie2/HISAT using single-end to generate FPKM???
bowtie2 fpkm hisat rna-seq rpkm written 8 months ago by jamieson.pierce10 • updated 8 months ago by Brian Bushnell15k
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537
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Calculating FPKM values from HT-counts
rpkm fpkm rna-seq written 8 months ago by rbronste150 • updated 8 months ago by Devon Ryan74k
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Convert read counts to RPKM or TPM values: Numbers don't look right?
geo rpkm gene expression tpm written 12 months ago by Tom10 • updated 12 months ago by mforde841.1k
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Comparing normal vs tumor using RPKM data from Wanderer/TCGA
rpkm tcga rna-seq written 2.2 years ago by jamie_jabalee0 • updated 16 months ago by foobarbaz0
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1
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Represent expression values
rpkm rna-seq written 3.5 years ago by int11ap1300 • updated 16 months ago by Biostar ♦♦ 20
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Outliers detection methods for RNA-Seq data
rpkm outliers rna-seq written 18 months ago by edianfranklin0 • updated 16 months ago by Whoknows630
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TCGA RNA-Seq Data: RSEM and RPKM
rpkm tcga rsem tcga-assembler rna-seq written 3.3 years ago by NetunoPonc√£160 • updated 16 months ago by Biostar ♦♦ 20
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28
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91k
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20 follow
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1
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RNA-seq RPKM significance cut off
rpkm cutoff rna-seq written 16 months ago by kennethcondon20071.1k • updated 16 months ago by Amitm1.4k
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Filter low expressed genes based on RPKM value
rpkm expression rna-seq written 17 months ago by AP20 • updated 17 months ago by fusion.slope130
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RNa-seq RPKM data normalization for clustering
rpkm rna-seq normalization written 17 months ago by edianfranklin0 • updated 17 months ago by seta930
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Top 20% expressed orthologus genes in two species
rpkm fpkm rna-seq written 19 months ago by Saad Khan310 • updated 17 months ago by Biostar ♦♦ 20
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1
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On calculating RPKM values for RNA-seq data
rpkm written 18 months ago by Yongjie Zhang80 • updated 18 months ago by dariober8.4k
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1
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Gene length table from gtf file for rpkm() function
rpkm htseq count edger gene length written 18 months ago by debitboro70 • updated 18 months ago by EagleEye4.9k
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