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Within-sample gene expression ranks
rpkm ccle rsem tpm written 11 days ago by sey10
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91
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RPKM value and TPM value
normal rpkm tumor tpm written 17 days ago by anjuraas10 • updated 17 days ago by Bastien HervĂ©4.8k
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202
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154
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Extract RPKM values from Diffbind
rpkm diffbind chip-seq written 3 months ago by francesca330 • updated 3 months ago by Rory Stark790
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147
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Calculating Fpkm/Rpkm For Each Read Group Given A Gtf File
gtf rpkm fpkm rna-seq written 6.6 years ago by Nathan S. Watson-Haigh200 • updated 3 months ago by Biostar ♦♦ 20
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2
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224
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5 follow
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Comparison different Datasets without having the FASTQ
correction R bulkrnaseq rpkm batch written 4 months ago by camillab.30 • updated 4 months ago by ATpoint40k
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417
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1
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normalization with RPKM
normalization transposon data rna-seq rpkm written 16 months ago by Chironex20 • updated 10 months ago by Biostar ♦♦ 20
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1
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470
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1
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RPKM/CPM/FPKM to log2 units
rpkm log2 written 10 months ago by zhang.jianhai0 • updated 10 months ago by dsull1.6k
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why the TPM value is not same?
R tpm normalizing edger rpkm written 10 months ago by star260 • updated 10 months ago by RamRS30k
46
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3
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30 follow
3
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Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 7.6 years ago by biorepine1.5k • updated 11 months ago by Renesh1.9k
6
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451
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6 follow
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RPKM with bowtie output
rpkm rna bowtie count written 12 months ago by flogin250 • updated 11 months ago by anoo0
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4.8k
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6 follow
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1.9k
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6 follow
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Best way to address different batches of RNA-seq
rpkm sequence batch effect rna-seq fold change written 3.5 years ago by tud5512220 • updated 14 months ago by Biostar ♦♦ 20
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6 follow
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RPKM and TPM calculation
rpkm rna-seq written 14 months ago by friasoler20 • updated 14 months ago by kristoffer.vittingseerup3.4k
1
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535
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1
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Is calcuNormFactors necessary in the calculation of RPKM?
rpkm rna-seq edger written 15 months ago by wangdp123250 • updated 15 months ago by ATpoint40k
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2
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5 follow
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Are all RPKM/FPKMs in RNAseq "equal" ?
rpkm rna-seq written 19 months ago by CrazyB210 • updated 19 months ago by Charles Warden7.9k
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public RNAseq data : compare gene expression using RPKM
rpkm tutorial rna-seq anova written 20 months ago by dle0 • updated 20 months ago by Charles Warden7.9k
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9 follow
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What is RPKM/FPKM > 1 or 3 or 5?
rpkm fpkm ngs rna-seq normalization written 21 months ago by Susmita Mandal70 • updated 21 months ago by johnsonnathant80
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Values used for calculating FPKM Value
rpkm fpkm bowtie written 5.2 years ago by bassanio20 • updated 23 months ago by Biostar ♦♦ 20
6
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709
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5 follow
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Add RPKM values together for multiple different genes?
rpkm rna-seq gsea written 23 months ago by tpham26540 • updated 23 months ago by Michael Dondrup47k
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3
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To make difference or Ratio, it's a problem
rpkm rna-seq probeset written 2.6 years ago by Yijun Tian20 • updated 2.1 years ago by Kevin Blighe66k
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553
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2.2k
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5 follow
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2
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2
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4.6k
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2
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2
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1
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554
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1
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Genes' length to get RPKM if features count is not used?
rpkm salmon rna-seq edger written 2.4 years ago by Sharon490 • updated 2.4 years ago by h.mon31k
9
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855
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6 follow
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Help with heatmap
R heatmap expression rpkm written 2.5 years ago by Pin.Bioinf270 • updated 2.5 years ago by Zhilong Jia1.6k
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