Showing: rpkmreset
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6
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What is RPKM/FPKM > 1 or 3 or 5?
rpkm fpkm ngs rna-seq normalization written 4 weeks ago by Susmita Mandal20 • updated 4 weeks ago by johnsonnathant70
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Values used for calculating FPKM Value
rpkm fpkm bowtie written 3.5 years ago by vinumanikandan0 • updated 3 months ago by Biostar ♦♦ 20
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235
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5 follow
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Add RPKM values together for multiple different genes?
rpkm rna-seq gsea written 3 months ago by tpham26540 • updated 3 months ago by Michael Dondrup45k
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3
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To make difference or Ratio, it's a problem
rpkm rna-seq probeset written 10 months ago by Yijun Tian20 • updated 5 months ago by Kevin Blighe37k
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Genes' length to get RPKM if features count is not used?
rpkm salmon rna-seq edger written 9 months ago by Sharon410 • updated 9 months ago by h.mon23k
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1
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459
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6 follow
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Help with heatmap
R heatmap expression rpkm written 9 months ago by Pin.Bioinf230 • updated 9 months ago by Zhilong Jia1.4k
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Log transformation of RPKM data for PCA analysis
rpkm log-transformation pca rna-seq written 3.3 years ago by ApoorvaB160 • updated 11 months ago by Biostar ♦♦ 20
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How to define the gene length for RPKM calculation
rpkm expression rna-seq .gtf written 2.9 years ago by Bnf83130 • updated 12 months ago by lhdcsu10
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11 follow
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Rpkm (R Code)
rpkm written 4.9 years ago by HNK120 • updated 13 months ago by EagleEye6.2k
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5 follow
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Tutorial: bam2rpkm by bedtools
bedtools rpkm tutorial bam rna-seq written 15 months ago by jmzeng131490
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RPKM documentation is needed!
rpkm gtex rna-seq written 15 months ago by sima_r13910
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25 follow
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Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 5.9 years ago by biorepine1.4k • updated 17 months ago by Renesh1.5k
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5 follow
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Rpkm Calculation
rpkm written 7.0 years ago by Varun Gupta1.1k • updated 17 months ago by Biostar ♦♦ 20
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1.4k
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differential expression based on multiple biological repeats
rpkm differential-expression rna-seq written 4.4 years ago by Whetting1.5k • updated 17 months ago by KVC_bioinfo350
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Best way to address different batches of RNA-seq
rpkm sequence batch effect rna-seq fold change written 21 months ago by tud5512220 • updated 20 months ago by Biostar ♦♦ 20
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10 follow
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Bowtie2/HISAT using single-end to generate FPKM???
bowtie2 fpkm hisat rna-seq rpkm written 21 months ago by jamieson.pierce30 • updated 21 months ago by Brian Bushnell16k
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Calculating FPKM values from HT-counts
rpkm fpkm rna-seq written 21 months ago by rbronste230 • updated 21 months ago by Devon Ryan88k
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Convert read counts to RPKM or TPM values: Numbers don't look right?
geo rpkm gene expression tpm written 2.1 years ago by Tom20 • updated 2.1 years ago by mforde841.2k
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Comparing normal vs tumor using RPKM data from Wanderer/TCGA
rpkm tcga rna-seq written 3.3 years ago by jamie_jabalee0 • updated 2.4 years ago by foobarbaz0
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Represent expression values
rpkm rna-seq written 4.6 years ago by int11ap1310 • updated 2.4 years ago by Biostar ♦♦ 20
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Outliers detection methods for RNA-Seq data
rpkm outliers rna-seq written 2.6 years ago by edianfranklin0 • updated 2.4 years ago by Whoknows670
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5 follow
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TCGA RNA-Seq Data: RSEM and RPKM
rpkm tcga rsem tcga-assembler rna-seq written 4.3 years ago by NetunoPonc√£160 • updated 2.4 years ago by Biostar ♦♦ 20
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