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<prev • 52 results • page 1 of 2 • next >
4
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3
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119
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5 follow
3
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Filtering rRNA from RNAseq data
rrna sortmerna rna-seq fastqc written 1 day ago by rsafavi • 20
1
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0
answers
107
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0
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very small insert sizes for 16S rRNA after paired-end reads overlap
rrna 16s miseq ngs written 8 weeks ago by ElUretsky • 20 • updated 6 weeks ago by Biostar ♦♦ 20
0
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0
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91
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0
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sortMeRNA before or after adapters trimming ?
rrna sortmerna rna-seq written 9 weeks ago by debitboro • 70
5
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3
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1.1k
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5 follow
3
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How to recover a 16S rRNA gene from genome reads?
genome rrna denovo assembly written 14 months ago by fhsantanna • 410 • updated 4 months ago by felipe.zoujiro • 20
2
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0
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769
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0
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Could high duplication be from ribosomal RNA in RNA-seq samples?
rrna sequencing rna-seq duplication written 23 months ago by mmrcksn • 50 • updated 5 months ago by Biostar ♦♦ 20
2
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2
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1.8k
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2
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RNA-seq rRNA contamination
rrna rna-seq written 22 months ago by igor ♦ 6.2k • updated 8 months ago by Friederike • 1.8k
4
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0
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591
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6 follow
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Use machine learning as classifier
18s R 16s its rrna written 11 months ago by cool.abbecker • 30 • updated 9 months ago by Biostar ♦♦ 20
0
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0
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722
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0
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how to calculate genome coding density
genome assembly rrna written 10 months ago by bsp017 • 20
0
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0
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286
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0
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A DB for rRNA, especially one containing rRNA pseudogenes?
rrna rna-seq written 10 months ago by blur • 90
0
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0
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317
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0
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Annotate multiple rRNAs with variable and constant regions
multiple alignment rrna silva written 11 months ago by predeus • 540
0
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1
answer
533
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1
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RNAmmer returns 8s_rRNA, which is what?
rnammer rrna gene prediction gene annotation written 12 months ago by Anand Rao • 110 • updated 12 months ago by h.mon ♦ 15k
0
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0
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588
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0
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rRNA secondary structure
rrna secondary_structure written 2.3 years ago by guma44 • 0 • updated 15 months ago by Biostar ♦♦ 20
5
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1
answer
1.2k
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1
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Where to find canonical versions of 18S sequences?
18s rrna databases written 3.1 years ago by Pawel Szczesny ♦ 3.2k • updated 15 months ago by Alex Bel • 30
3
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1
answer
750
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1
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ribosomal RNA contamination
rnaseq rrna contamination written 17 months ago by lkmklsmn • 810 • updated 17 months ago by Devon Ryan ♦ 80k
1
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0
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1.0k
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0
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Ribosomal RNA in RNA-seq data
rrna mapping rna-seq ribosomal written 18 months ago by lkmklsmn • 810
1
vote
1
answer
692
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1
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Quantification of Maps to rRNA and mtDNA
rrna alignment star mtrna rna-seq written 18 months ago by dec986 • 100 • updated 18 months ago by Devon Ryan ♦ 80k
1
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0
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471
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0
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Do I need to explicitly remove rRNA from E. coli RNAseq data?
rnaseq rrna transcriptomics ecoli written 20 months ago by Lina F • 120
2
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0
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944
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0
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How to compute RNA-Seq mapping stats for rRNAs?
rnaseq rrna alignment rna-seq statistics written 21 months ago by PAn • 20
2
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1
answer
1.0k
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1
answer
rRNA quantification: which is the best way?
rrna featurecounts mapping written 23 months ago by A. Domingues • 1.5k • updated 23 months ago by Charles Plessy • 2.5k
0
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0
answers
688
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0
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How to choose the correct ncRNA sequence from a RNA sequence database (Rfam, ENA, RNAcentral, etc)
rrna rnacentral rna ncrna ribosome written 2.1 years ago by Nicholas Kovacs • 0
3
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1
answer
1.3k
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1
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Forum: ribosomal depletion for RNA seq
forum rrna ngs rna-seq poly a ribosomal depletion written 2.4 years ago by montenegro • 10 • updated 2.4 years ago by Devon Ryan ♦ 80k
10
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4
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6.5k
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5 follow
4
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How Can I Batch Blast Sequences To Identify Them?
rrna sequence blast written 7.2 years ago by John • 750 • updated 2.4 years ago by Antonio R. Franco • 3.7k
6
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3
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1.4k
views
3
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if i am right to remove the contamination?
ribo-seq myposts rrna written 2.8 years ago by F • 3.0k • updated 2.7 years ago by frank1987lee1987 • 10
9
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2
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9.4k
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2
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filtering rRNA from fastq files or mapping results
gtf rrna rna-seq written 3.4 years ago by tomasscheitel • 10 • updated 2.8 years ago by Biostar ♦♦ 20
2
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1
answer
1.8k
views
1
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How do you find the percentage of reads contaminated by rRNA?
rrna rna R written 2.8 years ago by espop23 • 60 • updated 2.8 years ago by Gjain ♦ 5.2k
0
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0
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620
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0
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ribosomal RNA for cleaning contamination during ribo-seq
rrna ribo-seq written 2.8 years ago by F • 3.0k
0
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0
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683
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0
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database for mucor related diseases?
mucor rrna database sequence written 3.0 years ago by mralikhosravi • 0 • updated 3.0 years ago by PoGibas ♦ 4.7k
0
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1
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2.8k
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1
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Human Non Coding Rrna Sequences For Download
rrna small rna mirna written 6.2 years ago by Ngsnewbie • 360 • updated 3.0 years ago by Biostar ♦♦ 20
0
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0
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789
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0
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anlysis of partial sequenced mucor 18S ribosomal RNA gene
gene rrna sequence blast alignment written 3.1 years ago by mralikhosravi • 0
30
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8
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7.4k
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10 follow
8
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Finding Rrna Genes In Metagenomic Data
rrna metagenomics rna database written 7.7 years ago by toshnam • 610 • updated 3.2 years ago by k09im01 • 0
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