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Problem with DESeq package: ncol(countData) == nrow(colData) is not TRUE
R deseq rstudio rna-seq written 7 days ago by lmck0705 • 0
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3
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108
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5 follow
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Remove ensembl identifiers from Seurat
seurat rstudio rna-seq written 10 days ago by V • 230 • updated 10 days ago by jared.andrews07 ♦ 6.1k
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112
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Using R Studio on Cloud
R rna-seq rstudio single cell written 12 days ago by lokraj2003 • 90 • updated 11 days ago by zx8754 ♦ 9.3k
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Error in GSEA function of clusterProfiler on R
R gsea rstudio rna-seq written 12 days ago by j.thomas93 • 0 • updated 12 days ago by jared.andrews07 ♦ 6.1k
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News: Statistical Computing for Environmental Science with R and Rstudio
online statistics rproject news course rstudio written 22 days ago by Transmitting Science communication • 0
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106
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Seurat FeaturePlot across stims
seurat rstudio written 7 weeks ago by V • 230
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132
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RStudio Cloud : Problem in Package Installing
bioinformatics bioconductor rstudio written 8 weeks ago by Rishabh Jha • 0
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1
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Subsetting Genes from Clusters
R dataframes rstudio seurat written 9 weeks ago by V • 230
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138
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1
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Amazon AWS setup for the bioinformatic analysis particularly scRNAseq
aws rstudio scrnaseq written 9 weeks ago by akh22 • 40 • updated 9 weeks ago by Kevin Blighe ♦ 61k
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147
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RCircos errors: Warning message: In data(file) data set file not found & non-numeric argument to binary operator
genome R rstudio rcircos plots written 3 months ago by marvel479 • 0 • updated 3 months ago by zx8754 ♦ 9.3k
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186
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NGSseq heatmap RStudio
R ggplot rna-seq rstudio heatmap written 3 months ago by aroso491 • 0
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1
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127
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1
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Cluster using known marker genes (Seurat)
single cell rnaseq seurat rstudio rnaset written 4 months ago by V • 230 • updated 4 months ago by Arup Ghosh ♦ 2.5k
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Problem running clusterProfiler. Says DO.db is missing even when it's installed
do.db clusterprofiler rstudio written 4 months ago by syrez • 40 • updated 4 months ago by Biostar ♦♦ 20
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Does anyone manage to install Monocle3 on Rstudio 3.6.1 (on Debian 9)?
R monocle3 rstudio written 4 months ago by castravete2712 • 0
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3
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Execute commands in Bash Chunk in Rmarkdown
samtools rmarkdown vcftools rstudio written 9 months ago by M.O.L.S • 10
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1
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R or Biopython for Natural Product Research?
natural products biopython rstudio written 13 months ago by dicenhour • 0 • updated 13 months ago by Jean-Karim Heriche ♦ 22k
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Error in read.table(file = file, header = header, sep = sep, quote = quote, : duplicate 'row.names' are not allowed
R csv rstudio matrix written 14 months ago by xxxxxxxx • 20 • updated 14 months ago by swbarnes2 ♦ 7.9k
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572
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1
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Bedtools merge -d option help
bedtools ubuntu rstudio distance bedr written 16 months ago by jantu008 • 0
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Issues with anaconda rstudio while using on a remote server
R anaconda rstudio written 17 months ago by Uday Rangaswamy • 120
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News: Training in Statistical Analysis using R @NIH, March 20-22,2019
analysis statistical news training platform rstudio written 17 months ago by AABI • 120
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How to load data into R from an external hard drive?
R load unix rstudio written 18 months ago by M.O.L.S • 10 • updated 18 months ago by zx8754 ♦ 9.3k
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ctsGE: Matrix Error
ctsge rstudio rna-seq written 19 months ago by anokhi1997 • 0 • updated 19 months ago by Biostar ♦♦ 20
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1.4k
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1
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MetaboAnalyst Install problems?
R metaboanalyst rstudio metaboanalystr written 21 months ago by BeetleCheers • 0 • updated 21 months ago by zx8754 ♦ 9.3k
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2.3k
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Paired line between two observations in stripchart ?
stripchart ggplot geom_line rstudio written 2.2 years ago by Björn • 40
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How to differ color based on rise or fall of values in boxplot ?
boxplot ggpaired ggbarplot rstudio written 2.3 years ago by Björn • 40 • updated 2.3 years ago by russhh ♦ 5.4k
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Stripchart to show expression of individual miRNA
stripchart gene expression edger rstudio mirna written 2.3 years ago by Björn • 40
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1
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1.7k
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1
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Error in ggbiplot
rnaseq rstudio pcaplot written 2.4 years ago by sandKings • 10 • updated 2.4 years ago by Kevin Blighe ♦ 61k
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Potential issue setting breaks in R for heatmap? Getting different results in RStudio's Plots panel than Exporting PDF
R rstudio heatmap written 2.7 years ago by moldach • 130 • updated 2.6 years ago by Biostar ♦♦ 20
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Problem with Pathways
pathway merge dataframe rstudio circuit pathway written 2.6 years ago by fp89 • 20 • updated 2.6 years ago by genomax ♦ 85k
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Error in RStudioGD() : Shadow graphics device error: r error 4 (R code execution error)
bioinformatics rstudio written 2.6 years ago by Grunir112 • 10 • updated 2.6 years ago by Sean Davis ♦ 26k
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