Showing: samreset
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Parsing reads from SAM file by Fwd-Fwd orientation
flag R sam written 16 hours ago by ThePresident20 • updated 15 hours ago by Pierre Lindenbaum92k
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samtools updation in linux
next-gen sam written 4 days ago by shafnaasmy.v.s0 • updated 4 days ago by WouterDeCoster16k
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Understanding Picards HsMetrics
picardtools bam sam written 19 days ago by finswimmer77120 • updated 19 days ago by Pierre Lindenbaum92k
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Bam file without any sequence
psl2sam sam blat written 20 days ago by tiago211287720
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Faster way to get coverage per base
alignment sam written 4 weeks ago by finswimmer77120 • updated 4 weeks ago by Vivek Todur30
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Error of bam-to-sam conversion using samtools
tophat2 samtools sam rna-seq bam written 6 weeks ago by Gary370 • updated 6 weeks ago by genomax226k
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Extract the mapped contig sequences from SAM/BAM file
bam samtools sam bwa written 6 weeks ago by sbdk8230 • updated 6 weeks ago by haro70
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SAM files alignment section: PNEXT
bam samtools sam written 7 weeks ago by AlchemistMoz10 • updated 7 weeks ago by Devon Ryan64k
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Novoalign: right index? and SAM output
novoalign ngs sam mapping written 7 weeks ago by maude0 • updated 7 weeks ago by Devon Ryan64k
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What second field zero means in sam file?
sam written 8 weeks ago by biotech500
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Help: Read Sam File and find chromosome
genome python bam sam sequence written 11 weeks ago by thiemo.moellenkamp0 • updated 11 weeks ago by Helene340
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How to convert extended CIGAR to regular CIGAR
cigar bam sam written 12 weeks ago by artemd0 • updated 12 weeks ago by Pierre Lindenbaum92k
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Conversion Of Blat Output To Sam/Bam
conversion format sam bam blat written 6.3 years ago by Michael Dondrup41k • updated 3 months ago by Botond Sipos1.5k
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BWA-MEM using long PacBio reads
bwa-mem alignement sam pacbio written 3 months ago by Roxane Boyer180 • updated 3 months ago by Brian Bushnell10k
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Change signification in bam for duplicates
duplicates bam sam written 3 months ago by fedulka50 • updated 3 months ago by Devon Ryan64k
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6 follow
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SAM / BAM alignments
bam sam written 3 months ago by John11k
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importing .SAM files into R (Rstudio)
R sam bowtie written 3 months ago by Ameerosein70 • updated 3 months ago by Goutham Atla7.1k
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Not consistent result between SAM filtering and bowtie
sam bowtie written 9 months ago by Picasa270 • updated 4 months ago by Biostar ♦♦ 10
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Samtools sam-> Bam
rnaseq bam samtools sam written 4 months ago by V20 • updated 4 months ago by Devon Ryan64k
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Storage of all SAM/BAM and VCF files generated in a pipeline
vcf bam pipeline sam written 7 months ago by sleepyhead4440 • updated 4 months ago by Biostar ♦♦ 10
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