Showing: samreset
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2
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Extract the SAM File header section
htsjdk java bam samtools sam written 4 days ago by mhasa00630 • updated 3 days ago by Pierre Lindenbaum110k
5
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132
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5 follow
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Filter sam/bam files
filter bam samtools sam gbs written 25 days ago by ramesh.8v200 • updated 25 days ago by swbarnes23.8k
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243
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Iterating through paired-end reads in samtools / pysam
python bam sam written 3 months ago by olavur60 • updated 4 weeks ago by Michi930
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3
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10k
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8 follow
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Fasta File To Sam Conversion
fasta format sam conversion written 7.2 years ago by Rallapalli Sukeerthi Teja10 • updated 5 weeks ago by harishchander.a0
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128
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extract one-side unmapped reads from sam
tophat bam samtools sam written 5 weeks ago by liorglic40 • updated 5 weeks ago by Carlo Yague4.1k
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7 follow
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A Question On Doing Substitution By Using Bash
unix sam written 6.9 years ago by Yunfei Li280 • updated 5 weeks ago by Biostar ♦♦ 20
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Sam file header and truncated file
header samtools sam written 21 months ago by TriS3.4k • updated 8 weeks ago by Volkan Sevim0
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154
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Error of SAMSequenceDictionary
samtools sam igv written 9 weeks ago by niu.shengyong30 • updated 9 weeks ago by genomax52k
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How to convert from a cigar string to extended cigar string?
extended cigar cigar c++ sam bam written 11 weeks ago by omariqbal20170 • updated 11 weeks ago by genomax52k
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174
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How to simply extract certain filed from sam file
assembly samtools sam written 12 weeks ago by 93496353410 • updated 12 weeks ago by swbarnes23.8k
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188
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How to check if a read in a SAM file contains substitutions
read bam sam c++ written 4 months ago by omariqbal20170 • updated 4 months ago by d-cameron1.8k
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converting SAMRecord to JSON or String format
htsjdk json sam samrecord written 24 months ago by dsvispute910 • updated 4 months ago by Biostar ♦♦ 20
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Two Fastq Files And Alignment With Bwa.
fastq alignment sam bwa written 6.7 years ago by KCC3.9k • updated 4 months ago by Biostar ♦♦ 20
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173
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18 follow
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How To Sort Sam File
samtools sam written 4.4 years ago by Chen670 • updated 4 months ago by Biostar ♦♦ 20
3
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1
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214
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2
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6 follow
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Fastq and sam number of reads
ngs fastq sam written 4 months ago by ceboral0 • updated 4 months ago by swbarnes23.8k
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