Showing: samreset
<prev • 516 results • page 1 of 18 • next >
3
votes
0
answers
126
views
5 follow
0
answers
0
votes
0
answers
71
views
0
answers
3
votes
2
answers
214
views
2
answers
Finding the number of aligned nucleotides per read in a sam file
cigar stings sam written 5 months ago by ioannis30 • updated 16 days ago by jilguero88810
1
vote
1
answer
111
views
1
answer
6
votes
5
answers
4.5k
views
7 follow
5
answers
Collect Read Pairs Where At Least One Read Is Mapped
paired-end samtools sam written 5.7 years ago by fridhackery140 • updated 5 weeks ago by ying.kev0
1
vote
0
answers
147
views
0
answers
0
votes
0
answers
114
views
0
answers
8
votes
1
answer
4.1k
views
1
answer
How To Force 'Bwa Samse' To Output Multiple Hits In .Sam Format?
sam bwa written 6.8 years ago by Leonor Palmeira3.7k • updated 6 weeks ago by Biostar ♦♦ 20
7
votes
1
answer
331
views
1
answer
8
votes
3
answers
242
views
6 follow
3
answers
Find bams with identical names and merge them
shell picard samtools sam bam written 10 weeks ago by brendes20 • updated 10 weeks ago by cpad011211k
7
votes
1
answer
184
views
1
answer
5
votes
1
answer
256
views
1
answer
Number of unmapped reads after filtering issue
samtools sam sequencing written 11 weeks ago by max_1930 • updated 11 weeks ago by finswimmer11k
2
votes
1
answer
147
views
1
answer
Ignore SAM header section using awk
bam sam sequencing written 11 weeks ago by max_1930 • updated 11 weeks ago by RamRS20k
10
votes
3
answers
1.2k
views
5 follow
3
answers
Faster way to get coverage per base
alignment sam written 24 months ago by finswimmer11k
6
votes
3
answers
2.6k
views
8 follow
3
answers
Mismatch and Indel statistics from BAM/SAM file
indel bam sam written 22 months ago by sbdk8240 • updated 3 months ago by FatihSarigol120
20
votes
1
answer
927
views
5 follow
1
answer
4
votes
1
answer
219
views
1
answer
Contig name in SAM file
contig contigs sam contig name written 3 months ago by maryam.9510 • updated 3 months ago by WouterDeCoster37k
5
votes
1
answer
1.3k
views
1
answer
Extracting tlen From BAM File Using htsjdk
htsjdk bam samtools sam tlen written 2.4 years ago by Hakan.Erol.HE10 • updated 3 months ago by Biostar ♦♦ 20
2
votes
2
answers
216
views
2
answers
Making BAM or SAM files equivalent
alignment popoolation2 sam popoolation bam written 3 months ago by keturner1230 • updated 3 months ago by finswimmer11k
2
votes
1
answer
173
views
1
answer
Filtering noise out of SAM file using CIGAR
cigar sam written 3 months ago by blur90 • updated 3 months ago by Carambakaracho930
0
votes
1
answer
184
views
1
answer
Errors with samtools depth on merged bam file
bam samtools sam written 4 months ago by rbronste230 • updated 4 months ago by bioExplorer3.7k
0
votes
0
answers
176
views
0
answers
Filtering SAM file based on column numbers
filter alignment sam written 4 months ago by elena.syp0 • updated 4 months ago by Pierre Lindenbaum118k
5
votes
1
answer
367
views
1
answer
sam file not showing multi mapped reads
bowtie2 sam written 6 months ago by Moses60 • updated 4 months ago by Biostar ♦♦ 20
1
vote
1
answer
246
views
1
answer
Get genes and coverage/depth per gene from sam/bam
ngs bam sam coverage per gene depth per gene written 4 months ago by prishly0 • updated 4 months ago by Charles Warden6.4k
1
vote
1
answer
304
views
1
answer
0
votes
0
answers
246
views
0
answers
How to ignore truncation error with PySam?
python sam alignment mapping pysam written 5 months ago by O.rka80 • updated 5 months ago by Biostar ♦♦ 20
5
votes
1
answer
318
views
1
answer
A constant problem with SAM file header
software error bowtie2 sam written 5 months ago by popescuiofelia10 • updated 5 months ago by h.mon24k
0
votes
1
answer
545
views
1
answer
How to extract sequence message from SAM?
bed sam sequencing written 22 months ago by Jeason Rad30 • updated 5 months ago by Biostar ♦♦ 20
3
votes
1
answer
434
views
8 follow
1
answer
Merge multiple Sam files to one big Sam file. How?
overlapzscore samtools sam heatmap written 5 months ago by jaqx00840 • updated 5 months ago by gocougs20
4
votes
1
answer
263
views
1
answer
<prev • 516 results • page 1 of 18 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1757 users visited in the last hour