Showing: samreset
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How to find the mapping quality (mapQ) score of a variant
vcf sam written 2 days ago by gmora10 • updated 1 day ago by Lauren M.10
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BAM/SAM to FASTA conversion
bam sam written 2.5 years ago by biolab890 • updated 11 days ago by Chadi Saad30
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Increase the fifth column ( MAPQ) value in Sam file
mapq alignment sam sequencing written 4 weeks ago by madhu.912410 • updated 4 weeks ago by novice670
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Cigar And Sequence Length Are Inconsistent In Sam File
sam written 4.2 years ago by xiaoyanli820 • updated 6 weeks ago by Biostar ♦♦ 20
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direct two-color Agilent SAM analysis?
agilent R sam microarray written 2.2 years ago by evansjo10 • updated 7 weeks ago by Ace0
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253
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5 follow
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How to extract reads with no INDEL?
indel samtools sam written 9 weeks ago by Jeason Rad30 • updated 9 weeks ago by dariober7.9k
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Mismatch and Indel statistics from BAM/SAM file
indel bam sam written 10 weeks ago by sbdk8230 • updated 10 weeks ago by Brian Bushnell13k
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How to extract sequence message from SAM?
bed sam sequencing written 11 weeks ago by Jeason Rad30 • updated 11 weeks ago by Pierre Lindenbaum96k
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Extract specific fragments from SAM and count them
sam snp written 11 weeks ago by Jeason Rad30 • updated 11 weeks ago by kennethcondon2007810
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Parsing reads from SAM file by Fwd-Fwd orientation
flag R sam written 12 weeks ago by ThePresident40 • updated 12 weeks ago by Pierre Lindenbaum96k
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samtools updation in linux
next-gen sam written 3 months ago by shafnaasmy.v.s0 • updated 3 months ago by WouterDeCoster20k
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Understanding Picards HsMetrics
picardtools bam sam written 3 months ago by finswimmer300 • updated 3 months ago by Pierre Lindenbaum96k
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122
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Bam file without any sequence
psl2sam sam blat written 3 months ago by tiago211287720
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Faster way to get coverage per base
alignment sam written 4 months ago by finswimmer300 • updated 4 months ago by Vivek Todur30
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Error of bam-to-sam conversion using samtools
tophat2 samtools sam rna-seq bam written 4 months ago by Gary380 • updated 4 months ago by genomax30k
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Extract the mapped contig sequences from SAM/BAM file
bam samtools sam bwa written 4 months ago by sbdk8230 • updated 4 months ago by haro120
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SAM files alignment section: PNEXT
bam samtools sam written 4 months ago by AlchemistMoz10 • updated 4 months ago by Devon Ryan68k
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Novoalign: right index? and SAM output
novoalign ngs sam mapping written 4 months ago by maude0 • updated 4 months ago by Devon Ryan68k
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