Showing: samtoolsreset
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Extracting chimeric reads from mapping
alignment samtools rna-seq bwa written 1 day ago by Anushka20 • updated 1 day ago by Pierre Lindenbaum98k
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119
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119
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VIew reads sorted by name in IGV
bam samtools igv written 7 days ago by nchuang160 • updated 5 days ago by d-cameron850
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10 follow
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Should I Remove The Unmapped Reads From My Bam ?
short next-gen samtools bam sequencing written 5.6 years ago by Pierre Lindenbaum98k • updated 8 days ago by Phoenix100
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94
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2
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Samtools sort crash
alignment samtools written 11 days ago by saaz12910 • updated 11 days ago by Pierre Lindenbaum98k
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142
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Samtools mpileup output: missing fields?
rnaseq samtools pileup mpileup written 17 days ago by cjaln0 • updated 17 days ago by John Marshall1.1k
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Samtools mpileup degenerative characters
samtools degenrative characters mpileup written 10 weeks ago by divya10 • updated 20 days ago by Biostar ♦♦ 20
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What is the algorithm or formula for converting SAM to BAM?
ngs bam samtools sam written 26 days ago by Phoenix100 • updated 26 days ago by Devon Ryan70k
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142
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Samtools depth input
bed samtools rna-seq written 29 days ago by Afagh20
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6 follow
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Removal of PCR dupliactes from trimmed reads
duplicates samtools rmdup pre-processed reads written 4 weeks ago by deepti1rao0 • updated 4 weeks ago by genomax33k
3
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1
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150
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samtools return seek position
bam samtools written 4 weeks ago by peiqi11220 • updated 4 weeks ago by Devon Ryan70k
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what should a SAM/BAM record contain when there are no quality scores
bam samtools sam written 5 weeks ago by Ann2.1k • updated 5 weeks ago by jkbonfield30
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198
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Sorting samtools output by flag or grepping its tags
flag grep samtools chimeric written 5 weeks ago by BPors10 • updated 5 weeks ago by jkbonfield30
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192
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1
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Errors when install samtools 0.1.18 from source code
software error samtools written 5 weeks ago by syrttgump30 • updated 5 weeks ago by Michael Dondrup43k
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243
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How samtools calculate error rate
samtools sequencing written 6 weeks ago by jianzheng9349635340 • updated 6 weeks ago by Devon Ryan70k
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10 follow
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191
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Count error rate of sam file
sequence next-gen alignment samtools written 7 weeks ago by jianzheng9349635340 • updated 6 weeks ago by Biostar ♦♦ 20
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155
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samtools faidx error
faidx samtools written 7 weeks ago by rbronste140 • updated 7 weeks ago by Matt Shirley7.8k
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