Showing: samtoolsreset
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Difference In Number Of Reads Using Samtools View And Igv
samtools rna-seq igv written 6.3 years ago by pm201350 • updated 9 hours ago by Biostar ♦♦ 20
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How To Extract Reads With Wrong Insert Size With Samtools
bam samtools awk written 6.8 years ago by Assa Yeroslaviz1.2k • updated 9 days ago by Biostar ♦♦ 20
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Deciphering Cigar
cigar next-gen samtools sam alignment written 7.1 years ago by Leszek4.0k • updated 11 days ago by Biostar ♦♦ 20
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find all alleles mutated with depth X20
sam file samtools sequencing written 14 days ago by sahar8500 • updated 14 days ago by lakhujanivijay4.3k
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Mpileup Multiple Samples - Individual Dp4 Values
vcf samtools written 7.8 years ago by Deniz200 • updated 20 days ago by Biostar ♦♦ 20
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What does "-Shu" do in samtools view
samtools view samtools -shu written 22 days ago by quiocarbajal10 • updated 22 days ago by RamRS23k
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using GNU parallel for bwa mem and samtools
parallel samtools bwa written 23 days ago by little_more10 • updated 22 days ago by ole.tange3.5k
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output of bedtools bamtofastq are empty files
bamtofastq bedtools fastq bam samtools written 4.3 years ago by szuszmok40 • updated 23 days ago by gohchengang19940
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cnvkit bgzf_read error 4 after 4 bytes
cnvkit samtools bzip written 29 days ago by sm.hashemin90 • updated 24 days ago by Eric T.2.5k
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Difference between samtools cat and the unix command cat?
samtools unix written 29 days ago by yh36230 • updated 29 days ago by benformatics1.1k
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Getting different results from bedtools and samtools
bedtools samtools bamfile rna-seq written 4 weeks ago by wstla270 • updated 4 weeks ago by Pierre Lindenbaum122k
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Issue With CRAM -> BAM -> FASTQ Conversion
samtools fastq bam cram view written 6 weeks ago by denis.k10 • updated 5 weeks ago by jkbonfield160
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samtools sort: failed to create temporary file: No space left on device
samtools cwl written 6 weeks ago by lizhichao80 • updated 5 weeks ago by ATpoint21k
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Samtools problem with running (Conda)
samtools conda written 6 months ago by bwczech70 • updated 6 weeks ago by steve2.2k
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Samtools view -f "OR" operator possible?
samtools written 7 weeks ago by QVINTVS_FABIVS_MAXIMVS2.3k • updated 7 weeks ago by dariober10k
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Count mapped reads to genes reference
bowtie2 samtools rna-seq written 7 weeks ago by RPuni0 • updated 7 weeks ago by i.sudbery5.2k
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Changing chromosome format in bam
picard samtools bam written 7 weeks ago by srhic0 • updated 7 weeks ago by lakhujanivijay4.3k
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