Showing: samtoolsreset
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Sorting .bam file by tag
samtools bamtools sequencing written 4 days ago by Srw10 • updated 3 days ago by Pierre Lindenbaum91k
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News: SAMTOOLS 1.4 released
news samtools written 14 days ago by Pierre Lindenbaum91k
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Error of bam-to-sam conversion using samtools
tophat2 samtools sam rna-seq bam written 16 days ago by Gary370 • updated 16 days ago by genomax224k
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Extract the mapped contig sequences from SAM/BAM file
bam samtools sam bwa written 19 days ago by sbdk8230 • updated 17 days ago by abel.i60
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HLA typing WGS data
wgs hla samtools bwa written 18 days ago by emblake30 • updated 18 days ago by dario.garvan350
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Problems installing samtools on linux (make command)
samtools linux written 2.6 years ago by axelwilhelm80 • updated 19 days ago by ruterpereira0
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Select concordantly mapped reads from a sam file without header
sequence alignment samtools written 4 months ago by valerie0 • updated 22 days ago by Biostar ♦♦ 10
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SAM files alignment section: PNEXT
bam samtools sam written 24 days ago by AlchemistMoz10 • updated 23 days ago by Devon Ryan63k
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Filter hits that aligned concordantly exactly 1 times base on mpq>40
bam samtools written 25 days ago by User000240 • updated 24 days ago by Brian Bushnell10k
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parse error with samtools
parallel samtools linux written 28 days ago by a.rex40
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emtpy bcf file
alignment samtools mpileup written 5 weeks ago by Illinu80
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Error in plot-vcfstats
samtools bcftools written 5 weeks ago by bharata1803190
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samtool flagstat question
bam samtools written 22 months ago by alex130 • updated 5 weeks ago by Biostar ♦♦ 10
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determine unique snp
python samtools vcftools snp mapping written 5 weeks ago by slimane.khayi20 • updated 5 weeks ago by Pierre Lindenbaum91k
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samtools flag 1548
bitwise flags samtools written 5 weeks ago by RT280 • updated 5 weeks ago by Pierre Lindenbaum91k
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Segmentation fault (core dumped) with Samtools index sorted.bam
bam samtools index written 6 weeks ago by deepak6430 • updated 6 weeks ago by Devon Ryan63k
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understanding multi-mapped reads
unique tophat2 samtools multi-mapped written 7 weeks ago by Assa Yeroslaviz1.1k • updated 7 weeks ago by Carlo Yague2.7k
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