Showing: samtoolsreset
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Paired-end flag for singleton
hi-c sequencing samtools paired-end sequencing written 3 days ago by docdot0 • updated 2 days ago by prasundutta87260
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How can I find Variants position by GATK and Samtools
gatk samtools snp written 17 days ago by Mbillah100 • updated 4 days ago by Biostar ♦♦ 20
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samtools view sample.bam >sample2.sam : lost the header
samtools written 5 days ago by flystar2330 • updated 5 days ago by finswimmer7.0k
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Errors with samtools depth on merged bam file
bam samtools sam written 6 days ago by rbronste200 • updated 6 days ago by Vijay Lakhujani3.2k
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bam_sort_core problem when bam files be processed by samtools
samtools rna-seq written 8 days ago by 110651827130 • updated 8 days ago by Istvan Albert ♦♦ 78k
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Bowtie2 Reads that aligned concordantly exactly 1 time
bowtie2 samtools written 3.5 years ago by AW350 • updated 12 days ago by Biostar ♦♦ 20
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how to extract counts from bam/merge-bam without gtf
R samtools bowtie2 rna-seq hisat2 written 13 days ago by Shahzad10 • updated 13 days ago by michael.ante2.7k
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Counting mutated reads from RNA Seq data
samtools mutation rna-seq variant analysis written 3.3 years ago by EVR490 • updated 13 days ago by hewm200810
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samtools sort: legacy usage
genome metagenomics samtools sort written 15 days ago by c.e.chong0 • updated 15 days ago by h.mon21k
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What sequence has being read by IGV's 'copy sequence'
igv alignment samtools coverage read map written 22 days ago by marongiu.luigi340 • updated 22 days ago by h.mon21k
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How to use samtools tview goto with long reference sequence name
samtools goto reference tview written 4 weeks ago by quokka10 • updated 26 days ago by John Marshall1.4k
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Reheadering a subsetted bam gives truncated file
reheader header samtools bam written 4 months ago by Luciferine0 • updated 4 weeks ago by Biostar ♦♦ 20
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Installing samtools from sourceforge
installation samtools sourceforge samtools0.1.19 written 5 weeks ago by c.clarido40 • updated 5 weeks ago by Dhana70
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Varscan2 copynumber 'Parsing Exception' error
varscan2 copynumber samtools bam whole exome written 2.3 years ago by Vanish00710 • updated 5 weeks ago by jgarces0
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Extracting Read Pairs From Region So That All Pairs Remain Intact
fastq picard samtools bam written 5.2 years ago by Davy360 • updated 5 weeks ago by cmdcolin930
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How to read my Samtools mpileup?
samtools student mpileup written 5 weeks ago by c.clarido40 • updated 5 weeks ago by finswimmer7.0k
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