Showing: samtoolsreset
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SAM to BAM conversion error
genome alignment samtools bwa bam written 4 hours ago by jitendoshi20060 • updated 3 hours ago by Pierre Lindenbaum92k
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Picard vs samtools rmdup
picard samtools rna-seq written 7 hours ago by xd_d30
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Malformed BAM file produced by BWA
gatk picard samtools written 1 day ago by joreamayarom70 • updated 1 day ago by Pierre Lindenbaum92k
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Calling SNPs with low coverage
vcf low-coverage samtools mpileup snp written 9 days ago by devin.porter920 • updated 2 days ago by Brian Bushnell10k
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Is samtools' compression of bam to cram lossless?
samtools cram written 6 days ago by bjarki.sigurjons10 • updated 6 days ago by Devon Ryan64k
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The problem using samtools stats
samtools stats sequencing written 7 days ago by 9349635340 • updated 7 days ago by Devon Ryan64k
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BAM to FASTA
fasta bam to fasta bam samtools written 8 days ago by ivamoresq0 • updated 8 days ago by WouterDeCoster16k
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samtools variant calling workflow
variant calling realignment samtools written 8 days ago by mirza60 • updated 8 days ago by Santosh Anand1.6k
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Number of sequenced positions from a BAM file
bam samtools rna-seq written 8 days ago by rubic120 • updated 8 days ago by Devon Ryan64k
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Samtools Merge/Reheader Of Bam Files With Different @Sq Lines
ngs samtools written 3.6 years ago by Nathan S. Watson-Haigh160 • updated 10 days ago by Biostar ♦♦ 10
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error in query a BAM file
software error samtools written 18 days ago by shoujun.gu0 • updated 18 days ago by Pierre Lindenbaum92k
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VCF file with AF(allele frequency)
vcf allele frequency samtools snp written 22 months ago by Parimala Devi20 • updated 28 days ago by gsr999950
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Sorting .bam file by tag
samtools bamtools sequencing written 4 weeks ago by Srw10 • updated 4 weeks ago by Pierre Lindenbaum92k
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News: SAMTOOLS 1.4 released
news samtools written 6 weeks ago by Pierre Lindenbaum92k
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Error of bam-to-sam conversion using samtools
tophat2 samtools sam rna-seq bam written 6 weeks ago by Gary370 • updated 6 weeks ago by genomax226k
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Extract the mapped contig sequences from SAM/BAM file
bam samtools sam bwa written 7 weeks ago by sbdk8230 • updated 6 weeks ago by haro70
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HLA typing WGS data
wgs hla samtools bwa written 7 weeks ago by emblake40 • updated 7 weeks ago by dario.garvan350
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