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Assembly size decreased after using SSPACE for scaffolding
sspace contigs assembly size scaffolding written 9 months ago by deepti1rao30 • updated 8 months ago by Biostar ♦♦ 20
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SSPACE-LongRead, PBjelly2 and OPERA-LG comparison
genome assembly next-gen scaffolding pacbio written 3.0 years ago by gabri50 • updated 19 months ago by AK1.9k
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Scaffolding contigs generated by minia
genome assembly denovo_assembly minia scaffolding written 2.1 years ago by Mostafa20 • updated 2.1 years ago by RamRS30k
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How To Build Bambus Scaffolder On Ubuntu 10.04?
genome assembly scaffolding written 10.4 years ago by Michael Barton1.8k • updated 2.1 years ago by RamRS30k
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Figuring out HiC restriction enzyme
hi-c hic scaffolding written 2.6 years ago by gbdias90 • updated 2.2 years ago by joneill4x110
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Annotating/Finding "NNNNNN" scaffold gaps in genome assembly
bed ngs scaffolding assembly written 5.2 years ago by Adrian Pelin2.4k • updated 2.4 years ago by michael0
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Using the same read library to scaffold read tracked contigs
reads scaffolding velvet written 2.5 years ago by deepti1rao30 • updated 2.5 years ago by toralmanvar900
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SSPACE for scaffolding
contigs sspace insert size bbmap scaffolding written 2.5 years ago by deepti1rao30 • updated 2.5 years ago by RamRS30k
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long-range technologies for genome scaffolding
10x hi-c scaffolding nanopore optical maps written 2.7 years ago by yurybukhman20 • updated 2.5 years ago by Damian Kao15k
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Longer scaffolds from multiple eukaryote genome assemblies
genome scaffolding written 2.9 years ago by Eric Normandeau10k • updated 2.7 years ago by harishk020170
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Should I Join broken pacbio sequences and use them to scaffold Contigs ?
pacbio scaffolding written 2.9 years ago by elzedleeu20 • updated 2.9 years ago by Istvan Albert ♦♦ 85k
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Preparing A Scaffolded Genome For Genbank Submission
gff3 fasta genbank scaffolding written 7.2 years ago by Rvosa570 • updated 3.0 years ago by eennadi0
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Rescaffolding a genome assembly?
abyss scaffolding written 3.4 years ago by cmdcolin1.4k
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scaffolding denovo contigs to genome
scaffolding denovo written 6.2 years ago by iraun3.8k • updated 3.7 years ago by Biostar ♦♦ 20
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N50 reduces after scaffolding
sspace discovar scaffolding genome assembly written 4.4 years ago by JstRoRR60 • updated 4.4 years ago by krsahlin60
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paired inforamtion to construct Scaffolds
assembly paired-end scaffolding written 4.7 years ago by midox260 • updated 4.7 years ago by Antonio R. Franco4.5k
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Bambus2 .Mate File
scaffolding written 8.7 years ago by Rahul Sharma600 • updated 4.7 years ago by Biostar ♦♦ 20
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